FFCP PHASE1:Hg19::chr11:65337828..65337854,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=254100 | |EntrezGene=254100 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=29bp_to_NR_038923_5end | |association_with_transcript=29bp_to_NR_038923_5end | ||
|cluster_id=chr11:65337828..65337854,- | |||
|coexpression_cluster_id=C999 | |||
|description=CAGE_peak_1_at_LOC254100_5end | |description=CAGE_peak_1_at_LOC254100_5end | ||
|id=chr11:65337828..65337854,- | |id=chr11:65337828..65337854,- | ||
|ontology_enrichment_celltype=CL:0000738!1.11e-24!140;CL:0002031!3.49e-20!124;CL:0002057!5.09e-20!42;CL:0000860!1.16e-19!45;CL:0002087!1.42e-18!119;CL:0000037!5.86e-18!172;CL:0000566!5.86e-18!172;CL:0000988!2.78e-17!182;CL:0000766!7.46e-17!76;CL:0002032!1.13e-16!165;CL:0000837!1.13e-16!165;CL:0000557!3.93e-14!71;CL:0000839!1.16e-13!70;CL:0002009!1.17e-12!65;CL:0002194!3.28e-12!63;CL:0000576!3.28e-12!63;CL:0000040!3.28e-12!63;CL:0000559!3.28e-12!63;CL:0000763!2.43e-10!112;CL:0000049!2.43e-10!112;CL:0000838!8.57e-07!52 | |ontology_enrichment_celltype=CL:0000738!1.11e-24!140;CL:0002031!3.49e-20!124;CL:0002057!5.09e-20!42;CL:0000860!1.16e-19!45;CL:0002087!1.42e-18!119;CL:0000037!5.86e-18!172;CL:0000566!5.86e-18!172;CL:0000988!2.78e-17!182;CL:0000766!7.46e-17!76;CL:0002032!1.13e-16!165;CL:0000837!1.13e-16!165;CL:0000557!3.93e-14!71;CL:0000839!1.16e-13!70;CL:0002009!1.17e-12!65;CL:0002194!3.28e-12!63;CL:0000576!3.28e-12!63;CL:0000040!3.28e-12!63;CL:0000559!3.28e-12!63;CL:0000763!2.43e-10!112;CL:0000049!2.43e-10!112;CL:0000838!8.57e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.16e-26;33!CL:0002057;1.16e-26;33!CL:0000473;2.70e-17;39!CL:0000234;2.70e-17;39!CL:0000576;1.32e-16;48!CL:0000766;6.74e-12;69!CL:0002087;5.58e-09;104!CL:0000094;6.47e-08;8!CL:0000236;1.83e-07;13!CL:0000738;5.45e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.13e-30,42;CL:0002057,1.13e-30,42;CL:0000738,2.25e-29,136;CL:0000473,5.49e-25,48;CL:0000234,5.49e-25,48;CL:0000766,1.28e-23,72;CL:0002031,1.49e-22,120;CL:0002087,2.34e-22,115;CL:0000037,4.45e-21,168;CL:0000988,2.87e-19,177;CL:0002032,3.24e-19,161;CL:0000837,3.24e-19,161;CL:0000557,4.67e-19,67;CL:0002009,2.18e-18,61;CL:0002194,4.40e-18,59;CL:0000576,4.40e-18,59;CL:0000040,4.40e-18,59;CL:0000559,4.40e-18,59;CL:0000839,5.30e-18,66;CL:0000763,5.49e-14,108;CL:0000049,5.49e-14,108;CL:0000094,5.78e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;2.87e-22;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.31e-17!115;UBERON:0002390!4.86e-15!102;UBERON:0003061!4.86e-15!102;UBERON:0002193!1.26e-12!112;UBERON:0001049!2.61e-12!57;UBERON:0005068!2.61e-12!57;UBERON:0006241!2.61e-12!57;UBERON:0007135!2.61e-12!57;UBERON:0002371!2.41e-11!80;UBERON:0002780!6.20e-11!41;UBERON:0001890!6.20e-11!41;UBERON:0006240!6.20e-11!41;UBERON:0002616!1.64e-10!59;UBERON:0003080!3.46e-10!42;UBERON:0001017!6.02e-10!82;UBERON:0000955!7.75e-10!69;UBERON:0006238!7.75e-10!69;UBERON:0001474!2.53e-09!86;UBERON:0005743!3.57e-09!86;UBERON:0000073!5.86e-09!94;UBERON:0001016!5.86e-09!94;UBERON:0002020!4.00e-08!34;UBERON:0003528!4.00e-08!34;UBERON:0001893!5.40e-08!34;UBERON:0002791!7.84e-08!33;UBERON:0001869!3.36e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;2.75e-09;53!UBERON:0002616;2.75e-09;53!UBERON:0002780;2.96e-09;41!UBERON:0001890;2.96e-09;41!UBERON:0001950;1.13e-07;20!UBERON:0002619;1.26e-07;22!UBERON:0002791;1.84e-07;32!UBERON:0003528;2.83e-07;34!UBERON:0002020;2.83e-07;34!UBERON:0001894;6.17e-07;7!UBERON:0001893;6.32e-07;34 | |||
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| ||
|short_description=p1@LOC254100 | |short_description=p1@LOC254100 | ||
}} | }} |
Latest revision as of 10:00, 19 September 2015
Short description: | p1@LOC254100 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC254100_5end |
Coexpression cluster: | C999_CD14_Eosinophils_Mast_Neutrophils_CD19_CD8_CD4 |
Association with transcript: | 29bp_to_NR_038923_5end |
EntrezGene: | LOC254100 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.13e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.13e-30 | 42 |
leukocyte | 2.25e-29 | 136 |
defensive cell | 5.49e-25 | 48 |
phagocyte | 5.49e-25 | 48 |
myeloid leukocyte | 1.28e-23 | 72 |
hematopoietic lineage restricted progenitor cell | 1.49e-22 | 120 |
nongranular leukocyte | 2.34e-22 | 115 |
hematopoietic stem cell | 4.45e-21 | 168 |
hematopoietic cell | 2.87e-19 | 177 |
hematopoietic oligopotent progenitor cell | 3.24e-19 | 161 |
hematopoietic multipotent progenitor cell | 3.24e-19 | 161 |
granulocyte monocyte progenitor cell | 4.67e-19 | 67 |
macrophage dendritic cell progenitor | 2.18e-18 | 61 |
monopoietic cell | 4.40e-18 | 59 |
monocyte | 4.40e-18 | 59 |
monoblast | 4.40e-18 | 59 |
promonocyte | 4.40e-18 | 59 |
myeloid lineage restricted progenitor cell | 5.30e-18 | 66 |
myeloid cell | 5.49e-14 | 108 |
common myeloid progenitor | 5.49e-14 | 108 |
granulocyte | 5.78e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.80e-18 | 98 |
blood island | 2.80e-18 | 98 |
neural tube | 5.38e-16 | 56 |
neural rod | 5.38e-16 | 56 |
future spinal cord | 5.38e-16 | 56 |
neural keel | 5.38e-16 | 56 |
hemolymphoid system | 7.55e-16 | 108 |
bone marrow | 4.26e-15 | 76 |
regional part of nervous system | 3.68e-14 | 53 |
regional part of brain | 3.68e-14 | 53 |
regional part of forebrain | 1.81e-13 | 41 |
forebrain | 1.81e-13 | 41 |
anterior neural tube | 1.81e-13 | 41 |
future forebrain | 1.81e-13 | 41 |
bone element | 5.51e-13 | 82 |
immune system | 7.57e-13 | 93 |
central nervous system | 4.58e-12 | 81 |
adult organism | 6.00e-12 | 114 |
nervous system | 1.51e-11 | 89 |
brain | 1.81e-11 | 68 |
future brain | 1.81e-11 | 68 |
skeletal element | 1.15e-10 | 90 |
brain grey matter | 8.01e-10 | 34 |
gray matter | 8.01e-10 | 34 |
neurectoderm | 1.40e-09 | 86 |
skeletal system | 5.83e-09 | 100 |
telencephalon | 6.70e-09 | 34 |
regional part of telencephalon | 7.43e-09 | 32 |
neural plate | 1.28e-08 | 82 |
presumptive neural plate | 1.28e-08 | 82 |
regional part of cerebral cortex | 3.98e-08 | 22 |
neocortex | 4.13e-08 | 20 |
cerebral hemisphere | 1.05e-07 | 32 |
diencephalon | 3.76e-07 | 7 |
future diencephalon | 3.76e-07 | 7 |
pre-chordal neural plate | 6.16e-07 | 61 |