FFCP PHASE1:Hg19::chr16:53468342..53468414,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5934 | |EntrezGene=5934 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9894 | |HGNC=9894 | ||
|TSSclassifier=strong | |||
|UniProt=Q08999,Q8NE70 | |UniProt=Q08999,Q8NE70 | ||
|association_with_transcript=0bp_to_ENST00000262133,NM_005611,uc002ehi.3_5end | |association_with_transcript=0bp_to_ENST00000262133,NM_005611,uc002ehi.3_5end | ||
|cluster_id=chr16:53468342..53468414,+ | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_1_at_RBL2_5end | |description=CAGE_peak_1_at_RBL2_5end | ||
|id=chr16:53468342..53468414,+ | |id=chr16:53468342..53468414,+ | ||
|ontology_enrichment_celltype=CL:0000738!5.64e-21!140;CL:0000037!1.31e-19!172;CL:0000566!1.31e-19!172;CL:0002032!2.67e-17!165;CL:0000837!2.67e-17!165;CL:0002031!2.63e-15!124;CL:0000988!6.15e-15!182;CL:0002087!1.28e-14!119;CL:0000838!8.82e-14!52;CL:0000542!5.58e-13!53;CL:0000051!5.58e-13!53;CL:0000791!1.20e-12!18;CL:0000789!1.20e-12!18;CL:0002420!1.20e-12!18;CL:0002419!1.20e-12!18;CL:0000790!1.20e-12!18;CL:0000084!3.14e-09!25;CL:0000827!3.14e-09!25;CL:0000625!1.49e-08!11 | |ontology_enrichment_celltype=CL:0000738!5.64e-21!140;CL:0000037!1.31e-19!172;CL:0000566!1.31e-19!172;CL:0002032!2.67e-17!165;CL:0000837!2.67e-17!165;CL:0002031!2.63e-15!124;CL:0000988!6.15e-15!182;CL:0002087!1.28e-14!119;CL:0000838!8.82e-14!52;CL:0000542!5.58e-13!53;CL:0000051!5.58e-13!53;CL:0000791!1.20e-12!18;CL:0000789!1.20e-12!18;CL:0002420!1.20e-12!18;CL:0002419!1.20e-12!18;CL:0000790!1.20e-12!18;CL:0000084!3.14e-09!25;CL:0000827!3.14e-09!25;CL:0000625!1.49e-08!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.21e-12;18!CL:0000789;1.21e-12;18!CL:0002419;1.21e-12;18!CL:0000084;3.31e-09;25!CL:0000625;1.47e-08;11!CL:0000542;1.78e-08;53!CL:0000236;5.64e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.48e-22,136;CL:0000037,2.33e-20,168;CL:0002032,5.28e-18,161;CL:0000837,5.28e-18,161;CL:0002031,4.10e-16,120;CL:0000988,5.52e-16,177;CL:0002087,2.02e-15,115;CL:0000838,8.82e-14,52;CL:0000542,5.58e-13,53;CL:0000051,5.58e-13,53;CL:0000791,1.20e-12,18;CL:0000789,1.20e-12,18;CL:0002420,1.20e-12,18;CL:0002419,1.20e-12,18;CL:0000790,1.20e-12,18;CL:0000084,3.14e-09,25;CL:0000827,3.14e-09,25;CL:0000625,1.49e-08,11;CL:0000766,2.55e-07,72;CL:0000763,3.77e-07,108;CL:0000049,3.77e-07,108 | |||
|ontology_enrichment_development_v019=CL:0000790;1.21e-12;18!CL:0000051;1.78e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.08e-27!115;UBERON:0002390!4.61e-07!102;UBERON:0003061!4.61e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;4.39e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.25e-26,114;UBERON:0002390,1.47e-07,98;UBERON:0003061,1.47e-07,98 | |||
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3.260541934841,56.5579359990784,25.3249108919554 | ||
|short_description=p1@RBL2 | |short_description=p1@RBL2 | ||
}} | }} |
Latest revision as of 22:40, 16 September 2015
Short description: | p1@RBL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RBL2_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000262133, NM_005611, uc002ehi.3_5end |
EntrezGene: | RBL2 |
HGNC: | 9894 |
UniProt: | Q08999Q8NE70 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 6.48e-22 | 136 |
hematopoietic stem cell | 2.33e-20 | 168 |
hematopoietic oligopotent progenitor cell | 5.28e-18 | 161 |
hematopoietic multipotent progenitor cell | 5.28e-18 | 161 |
hematopoietic lineage restricted progenitor cell | 4.10e-16 | 120 |
hematopoietic cell | 5.52e-16 | 177 |
nongranular leukocyte | 2.02e-15 | 115 |
lymphoid lineage restricted progenitor cell | 8.82e-14 | 52 |
lymphocyte | 5.58e-13 | 53 |
common lymphoid progenitor | 5.58e-13 | 53 |
mature alpha-beta T cell | 1.20e-12 | 18 |
alpha-beta T cell | 1.20e-12 | 18 |
immature T cell | 1.20e-12 | 18 |
mature T cell | 1.20e-12 | 18 |
immature alpha-beta T cell | 1.20e-12 | 18 |
T cell | 3.14e-09 | 25 |
pro-T cell | 3.14e-09 | 25 |
CD8-positive, alpha-beta T cell | 1.49e-08 | 11 |
myeloid leukocyte | 2.55e-07 | 72 |
myeloid cell | 3.77e-07 | 108 |
common myeloid progenitor | 3.77e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.25e-26 | 114 |
hematopoietic system | 1.47e-07 | 98 |
blood island | 1.47e-07 | 98 |