FFCP PHASE1:Hg19::chr16:50666194..50666212,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:50666194..50666212,+ | |||
|coexpression_cluster_id=C101 | |||
|description=CAGE_peak_at_chr16:50666194..50666212,+ | |description=CAGE_peak_at_chr16:50666194..50666212,+ | ||
|id=chr16:50666194..50666212,+ | |id=chr16:50666194..50666212,+ | ||
|ontology_enrichment_celltype=CL:0002563!2.68e-07!4;CL:0002253!4.48e-07!2 | |ontology_enrichment_celltype=CL:0002563!2.68e-07!4;CL:0002253!4.48e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.46e-17;12!CL:0000746;1.21e-08;3!CL:0000322;1.40e-08;3!CL:0000737;8.61e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.46e-17,12;CL:0000746,1.21e-08,3;CL:0000513,1.21e-08,3;CL:0000322,1.51e-08,3;CL:0000737,8.61e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;7.67e-19;11!UBERON:0001041;1.41e-18;30!UBERON:0009497;4.65e-16;13!CL:0000513;1.21e-08;3!UBERON:0003104;5.69e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;5.13e-23;1!DOID:1357;5.13e-23;1!DOID:1325;1.69e-13;7!DOID:3904;1.69e-13;7!DOID:0050615;5.75e-13;16!DOID:3910;3.24e-12;2!DOID:3905;1.02e-10;9!DOID:5409;8.14e-07;4!DOID:1324;8.58e-07;15 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,4.10e-23,1;DOID:1357,4.10e-23,1;DOID:1325,1.80e-13,7;DOID:3904,1.80e-13,7;DOID:0050615,5.75e-13,16;DOID:3910,3.62e-12,2;DOID:3905,1.07e-10,9;DOID:305,1.67e-07,106;DOID:5409,8.14e-07,4;DOID:1324,8.83e-07,15 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.97e-22!115;UBERON:0001049!1.07e-19!57;UBERON:0005068!1.07e-19!57;UBERON:0006241!1.07e-19!57;UBERON:0007135!1.07e-19!57;UBERON:0003075!5.66e-15!86;UBERON:0007284!5.66e-15!86;UBERON:0005743!1.05e-14!86;UBERON:0002020!2.26e-14!34;UBERON:0003528!2.26e-14!34;UBERON:0001017!2.79e-14!82;UBERON:0002346!5.08e-14!90;UBERON:0002616!1.35e-13!59;UBERON:0002780!3.20e-13!41;UBERON:0001890!3.20e-13!41;UBERON:0006240!3.20e-13!41;UBERON:0002791!7.28e-13!33;UBERON:0003080!8.03e-13!42;UBERON:0000073!1.01e-12!94;UBERON:0001016!1.01e-12!94;UBERON:0001893!2.11e-12!34;UBERON:0000955!6.09e-12!69;UBERON:0006238!6.09e-12!69;UBERON:0001869!2.03e-11!32;UBERON:0002619!2.55e-10!22;UBERON:0003056!3.96e-10!61;UBERON:0000153!2.12e-09!129;UBERON:0007811!2.12e-09!129;UBERON:0002240!2.20e-09!3;UBERON:0000033!2.63e-09!123;UBERON:0001950!3.39e-09!20;UBERON:0000025!6.55e-09!194;UBERON:0000956!6.80e-09!25;UBERON:0000203!6.80e-09!25;UBERON:0001871!9.79e-09!7;UBERON:0003076!1.91e-08!15;UBERON:0003057!1.91e-08!15;UBERON:0004121!2.51e-08!169;UBERON:0004111!4.82e-08!241;UBERON:0000924!5.69e-08!173;UBERON:0006601!5.69e-08!173;UBERON:0002308!1.71e-07!9;UBERON:0000125!1.71e-07!9;UBERON:0000483!2.36e-07!309;UBERON:0001242!2.68e-07!4;UBERON:0001262!2.68e-07!4;UBERON:0004786!2.68e-07!4;UBERON:0004808!2.68e-07!4;UBERON:0001277!2.68e-07!4;UBERON:0000119!3.47e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;5.13e-23;1!UBERON:0001825;5.13e-23;1!UBERON:0004903;3.24e-12;2!UBERON:0002173;3.24e-12;2!UBERON:0002186;3.24e-12;2!UBERON:0002107;3.31e-11;19!UBERON:0006925;3.31e-11;19!UBERON:0002423;1.14e-08;25!UBERON:0004821;1.40e-08;3!UBERON:0007499;1.40e-08;3!UBERON:0003215;1.40e-08;3!UBERON:0010368;1.40e-08;3!UBERON:0009911;1.40e-08;3!UBERON:0002299;1.40e-08;3!UBERON:0006524;1.40e-08;3!UBERON:0008874;1.40e-08;3!UBERON:0002169;1.40e-08;3!UBERON:0004894;1.40e-08;3!UBERON:0009856;9.63e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,4.10e-23,1;UBERON:0001825,4.10e-23,1;UBERON:0007499,1.53e-14,25;UBERON:0009856,5.33e-14,26;UBERON:0004903,3.62e-12,2;UBERON:0002173,3.62e-12,2;UBERON:0002186,3.62e-12,2;UBERON:0002107,3.31e-11,19;UBERON:0006925,3.31e-11,19;UBERON:0008836,3.31e-11,19;UBERON:0008835,9.12e-10,22;UBERON:0003894,9.12e-10,22;UBERON:0009854,2.28e-09,23;UBERON:0009497,1.14e-08,25;UBERON:0000015,1.14e-08,25;UBERON:0002423,1.14e-08,25;UBERON:0006235,1.14e-08,25;UBERON:0004161,1.14e-08,25;UBERON:0004821,1.51e-08,3;UBERON:0003215,1.51e-08,3;UBERON:0010368,1.51e-08,3;UBERON:0009911,1.51e-08,3;UBERON:0002299,1.51e-08,3;UBERON:0006524,1.51e-08,3;UBERON:0008874,1.51e-08,3;UBERON:0002169,1.51e-08,3;UBERON:0004894,1.51e-08,3;UBERON:0002365,4.21e-07,31;UBERON:0002330,4.21e-07,31;UBERON:0005911,6.86e-07,82 | |||
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| ||
|short_description=p@chr16:50666194..50666212,+ | |short_description=p@chr16:50666194..50666212,+ | ||
}} | }} |
Latest revision as of 09:32, 25 July 2015
Short description: | p@chr16:50666194..50666212, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:50666194..50666212, + |
Coexpression cluster: | C101_small_cerebellum_maxillary_colon_parietal_epididymis_merkel |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.46e-17 | 12 |
cardiac muscle cell | 1.21e-08 | 3 |
cardiac muscle myoblast | 1.21e-08 | 3 |
pneumocyte | 1.51e-08 | 3 |
striated muscle cell | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 4.10e-23 | 1 |
paranasal sinus | 4.10e-23 | 1 |
epithelial sac | 1.53e-14 | 25 |
sac | 5.33e-14 | 26 |
bronchoalveolar duct junction | 3.62e-12 | 2 |
alveolar duct | 3.62e-12 | 2 |
bronchiole | 3.62e-12 | 2 |
liver | 3.31e-11 | 19 |
digestive gland | 3.31e-11 | 19 |
liver bud | 3.31e-11 | 19 |
hepatic diverticulum | 9.12e-10 | 22 |
liver primordium | 9.12e-10 | 22 |
digestive tract diverticulum | 2.28e-09 | 23 |
epithelium of foregut-midgut junction | 1.14e-08 | 25 |
anatomical boundary | 1.14e-08 | 25 |
hepatobiliary system | 1.14e-08 | 25 |
foregut-midgut junction | 1.14e-08 | 25 |
septum transversum | 1.14e-08 | 25 |
pulmonary alveolus epithelium | 1.51e-08 | 3 |
alveolus | 1.51e-08 | 3 |
pulmonary lobule | 1.51e-08 | 3 |
lobule | 1.51e-08 | 3 |
alveolus of lung | 1.51e-08 | 3 |
alveolar system | 1.51e-08 | 3 |
pulmonary acinus | 1.51e-08 | 3 |
alveolar sac | 1.51e-08 | 3 |
alveolar wall | 1.51e-08 | 3 |
exocrine gland | 4.21e-07 | 31 |
exocrine system | 4.21e-07 | 31 |
endo-epithelium | 6.86e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 4.10e-23 | 1 |
maxillary sinus cancer | 4.10e-23 | 1 |
bronchus cancer | 1.80e-13 | 7 |
bronchogenic carcinoma | 1.80e-13 | 7 |
respiratory system cancer | 5.75e-13 | 16 |
lung adenocarcinoma | 3.62e-12 | 2 |
lung carcinoma | 1.07e-10 | 9 |
carcinoma | 1.67e-07 | 106 |
lung small cell carcinoma | 8.14e-07 | 4 |
lung cancer | 8.83e-07 | 15 |