FFCP PHASE1:Hg19::chr10:29811685..29811692,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:29811685..29811692,-
|short_description=p36@SVIL
|description=CAGE_peak_36_at_SVIL_5end
|association_with_transcript=-121bp_to_uc010qdw.1_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6840 | |EntrezGene=6840 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11480 | |HGNC=11480 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-121bp_to_uc010qdw.1_5end | |||
|cluster_id=chr10:29811685..29811692,- | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_36_at_SVIL_5end | |||
|id=chr10:29811685..29811692,- | |||
|ontology_enrichment_celltype=CL:0000148!3.04e-21!10;CL:0000541!3.04e-21!10;CL:0000710!3.68e-16!20;CL:0000147!7.19e-15!14;CL:0002567!2.30e-14!3;CL:0000075!3.19e-14!27;CL:0002195!2.33e-09!2;CL:0002571!2.33e-09!2;CL:0002077!3.98e-09!33;CL:0000325!1.56e-07!39 | |||
|ontology_enrichment_celltype_v019=CL:0002567;8.85e-75;3!CL:0000148;8.75e-62;10!CL:0000147;2.68e-44;14!CL:0000710;3.67e-31;20!CL:0000075;3.39e-23;27!CL:0002077;5.01e-16;34!CL:0000149;1.75e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,1.29e-74,3;CL:0000148,8.23e-62,10;CL:0000541,8.23e-62,10;CL:0000147,2.56e-44,14;CL:0000710,3.56e-31,20;CL:0000075,3.31e-23,27;CL:0002077,1.66e-18,34;CL:0000333,1.06e-14,41;CL:0000133,1.94e-10,59;CL:0000221,1.22e-08,72;CL:0000149,1.80e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;1.14e-13;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,9.40e-14,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p36@SVIL | |||
}} | }} |
Latest revision as of 20:55, 17 September 2015
Short description: | p36@SVIL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_36_at_SVIL_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | -121bp_to_uc010qdw.1_5end |
EntrezGene: | SVIL |
HGNC: | 11480 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 1.29e-74 | 3 |
melanocyte | 8.23e-62 | 10 |
melanoblast | 8.23e-62 | 10 |
pigment cell | 2.56e-44 | 14 |
neurecto-epithelial cell | 3.56e-31 | 20 |
columnar/cuboidal epithelial cell | 3.31e-23 | 27 |
ecto-epithelial cell | 1.66e-18 | 34 |
migratory neural crest cell | 1.06e-14 | 41 |
neurectodermal cell | 1.94e-10 | 59 |
ectodermal cell | 1.22e-08 | 72 |
visual pigment cell | 1.80e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
melanoma | 9.40e-14 | 2 |