FFCP PHASE1:Hg19::chr10:28367270..28367278,+: Difference between revisions
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|id=chr10:28367270..28367278,+
|short_description=p@chr10:28367270..28367278,+
|description=CAGE_peak_at_chr10:28367270..28367278,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:28367270..28367278,+ | |||
|coexpression_cluster_id=C429 | |||
|description=CAGE_peak_at_chr10:28367270..28367278,+ | |||
|id=chr10:28367270..28367278,+ | |||
|ontology_enrichment_celltype=CL:0000054!9.48e-12!2;CL:0000137!9.48e-12!2;CL:0000092!9.48e-12!2 | |||
|ontology_enrichment_celltype_v019=CL:0000243;3.03e-18;15!CL:0000125;3.03e-18;15!CL:0000095;2.05e-16;17!CL:0002319;8.62e-12;25!CL:0000306;1.63e-09;4!CL:0002222;1.63e-09;4!CL:0002224;1.63e-09;4!CL:0002149;9.23e-07;6!CL:0002255;9.23e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,3.03e-18,15;CL:0000125,3.03e-18,15;CL:0000030,3.03e-18,15;CL:0000339,3.03e-18,15;CL:0000095,2.05e-16,17;CL:0000123,2.05e-16,17;CL:0002319,8.62e-12,25;CL:0000306,1.70e-09,4;CL:0002222,1.70e-09,4;CL:0002224,1.70e-09,4;CL:0000333,1.14e-07,41;CL:0002149,8.97e-07,6;CL:0002255,8.97e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006238;1.07e-27;10!CL:0000339;3.03e-18;15!UBERON:0007123;5.35e-08;5 | |||
|ontology_enrichment_disease=DOID:200!9.48e-12!2;DOID:4305!9.48e-12!2;DOID:4468!2.23e-11!2 | |||
|ontology_enrichment_disease_v019=DOID:3093;1.81e-25;11!DOID:3001;9.23e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,1.81e-25,11;DOID:3001,8.97e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.46e-09!9;UBERON:0001557!2.03e-09!19;UBERON:0001282!6.08e-07!1;UBERON:0009842!6.08e-07!1;UBERON:0003704!6.08e-07!1;UBERON:0001171!6.08e-07!1;UBERON:0001172!6.08e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0010077;1.63e-09;4!UBERON:0005389;1.63e-09;4!UBERON:0000484;1.63e-09;4!UBERON:0000965;1.63e-09;4!UBERON:0001803;1.63e-09;4!UBERON:0002046;5.35e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,1.70e-09,4;UBERON:0005389,1.70e-09,4;UBERON:0000484,1.70e-09,4;UBERON:0002546,1.70e-09,4;UBERON:0000965,1.70e-09,4;UBERON:0001803,1.70e-09,4;UBERON:0003073,1.70e-09,4;UBERON:0005426,1.70e-09,4;UBERON:0002046,5.35e-08,5;UBERON:0004117,5.35e-08,5;UBERON:0007689,5.35e-08,5;UBERON:0007123,5.35e-08,5;UBERON:0003091,5.35e-08,5 | |||
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|short_description=p@chr10:28367270..28367278,+ | |||
}} | }} |
Latest revision as of 12:57, 23 July 2015
Short description: | p@chr10:28367270..28367278, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:28367270..28367278, + |
Coexpression cluster: | C429_anaplastic_Mast_clear_Neutrophils_squamous_Eosinophils_oral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 3.03e-18 | 15 |
glial cell | 3.03e-18 | 15 |
glioblast | 3.03e-18 | 15 |
glioblast (sensu Vertebrata) | 3.03e-18 | 15 |
neuron associated cell | 2.05e-16 | 17 |
neuron associated cell (sensu Vertebrata) | 2.05e-16 | 17 |
neural cell | 8.62e-12 | 25 |
crystallin accumulating cell | 1.70e-09 | 4 |
vertebrate lens cell | 1.70e-09 | 4 |
lens epithelial cell | 1.70e-09 | 4 |
migratory neural crest cell | 1.14e-07 | 41 |
epithelial cell of uterus | 8.97e-07 | 6 |
stromal cell of endometrium | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 1.70e-09 | 4 |
transparent eye structure | 1.70e-09 | 4 |
simple cuboidal epithelium | 1.70e-09 | 4 |
cranial placode | 1.70e-09 | 4 |
lens of camera-type eye | 1.70e-09 | 4 |
epithelium of lens | 1.70e-09 | 4 |
lens placode | 1.70e-09 | 4 |
lens vesicle | 1.70e-09 | 4 |
thyroid gland | 5.35e-08 | 5 |
pharyngeal pouch | 5.35e-08 | 5 |
thyroid diverticulum | 5.35e-08 | 5 |
pharyngeal pouch 2 | 5.35e-08 | 5 |
thyroid primordium | 5.35e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 1.81e-25 | 11 |
female reproductive endometrioid cancer | 8.97e-07 | 6 |