FFCP PHASE1:Hg19::chr11:63684602..63684664,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283248 | |EntrezGene=283248 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27455 | |HGNC=27455 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IZ40 | |UniProt=Q8IZ40 | ||
|association_with_transcript=-286bp_to_ENST00000301459,NM_173587,uc001nyc.2_5end | |association_with_transcript=-286bp_to_ENST00000301459,NM_173587,uc001nyc.2_5end | ||
|cluster_id=chr11:63684602..63684664,- | |||
|description=CAGE_peak_1_at_RCOR2_5end | |description=CAGE_peak_1_at_RCOR2_5end | ||
|id=chr11:63684602..63684664,- | |id=chr11:63684602..63684664,- | ||
|ontology_enrichment_celltype=CL:0000055!4.62e-13!180;CL:0000133!1.06e-10!59;CL:0002319!9.86e-09!25;CL:0000221!1.54e-08!71;CL:0000393!3.14e-08!60;CL:0000211!3.14e-08!60;CL:0000333!7.46e-08!41 | |ontology_enrichment_celltype=CL:0000055!4.62e-13!180;CL:0000133!1.06e-10!59;CL:0002319!9.86e-09!25;CL:0000221!1.54e-08!71;CL:0000393!3.14e-08!60;CL:0000211!3.14e-08!60;CL:0000333!7.46e-08!41 | ||
|ontology_enrichment_celltype_v019=CL:0002319;1.81e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,6.98e-10,59;CL:0002319,1.56e-08,25;CL:0000393,2.34e-08,61;CL:0000211,2.34e-08,61;CL:0000221,3.31e-07,72;CL:0000047,4.87e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3095!6.10e-09!22;DOID:2994!6.10e-09!22 | |ontology_enrichment_disease=DOID:3095!6.10e-09!22;DOID:2994!6.10e-09!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.90e-10;22!DOID:2994;1.90e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.39e-10,22;DOID:2994,2.39e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0000475!1.58e-15!365;UBERON:0000481!3.33e-15!347;UBERON:0000119!1.30e-11!312;UBERON:0000073!3.02e-11!94;UBERON:0001016!3.02e-11!94;UBERON:0000483!3.32e-11!309;UBERON:0005743!9.12e-10!86;UBERON:0000924!1.99e-09!173;UBERON:0006601!1.99e-09!173;UBERON:0001017!3.10e-09!82;UBERON:0004121!1.08e-08!169;UBERON:0002346!2.98e-08!90;UBERON:0005256!4.64e-08!143;UBERON:0003104!9.27e-08!238;UBERON:0009142!9.27e-08!238;UBERON:0003056!1.68e-07!61;UBERON:0003075!1.90e-07!86;UBERON:0007284!1.90e-07!86;UBERON:0000922!1.90e-07!612;UBERON:0000468!3.63e-07!659;UBERON:0004290!8.75e-07!70 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.33e-11,89;UBERON:0003104,2.00e-10,160;UBERON:0009142,2.00e-10,160;UBERON:0001017,5.70e-10,81;UBERON:0004121,4.31e-09,171;UBERON:0000924,4.31e-09,171;UBERON:0006601,4.31e-09,171;UBERON:0003056,4.54e-09,61;UBERON:0002346,7.25e-09,86;UBERON:0000119,2.47e-08,309;UBERON:0000483,5.75e-08,306;UBERON:0003075,5.97e-08,82;UBERON:0007284,5.97e-08,82;UBERON:0007503,1.94e-07,78;UBERON:0011216,3.73e-07,223;UBERON:0007524,5.09e-07,73;UBERON:0000955,6.75e-07,68;UBERON:0006238,6.75e-07,68;UBERON:0003077,8.11e-07,72;UBERON:0007285,8.11e-07,72 | |||
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| ||
|short_description=p1@RCOR2 | |short_description=p1@RCOR2 | ||
}} | }} |
Latest revision as of 00:37, 19 September 2015
Short description: | p1@RCOR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RCOR2_5end |
Coexpression cluster: | NA |
Association with transcript: | -286bp_to_ENST00000301459, NM_173587, uc001nyc.2_5end |
EntrezGene: | RCOR2 |
HGNC: | 27455 |
UniProt: | Q8IZ40 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 6.98e-10 | 59 |
neural cell | 1.56e-08 | 25 |
electrically responsive cell | 2.34e-08 | 61 |
electrically active cell | 2.34e-08 | 61 |
ectodermal cell | 3.31e-07 | 72 |
neuronal stem cell | 4.87e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
nervous system | 5.33e-11 | 89 |
mesenchyme | 2.00e-10 | 160 |
entire embryonic mesenchyme | 2.00e-10 | 160 |
central nervous system | 5.70e-10 | 81 |
ectoderm-derived structure | 4.31e-09 | 171 |
ectoderm | 4.31e-09 | 171 |
presumptive ectoderm | 4.31e-09 | 171 |
pre-chordal neural plate | 4.54e-09 | 61 |
neurectoderm | 7.25e-09 | 86 |
cell layer | 2.47e-08 | 309 |
epithelium | 5.75e-08 | 306 |
neural plate | 5.97e-08 | 82 |
presumptive neural plate | 5.97e-08 | 82 |
epithelial vesicle | 1.94e-07 | 78 |
organ system subdivision | 3.73e-07 | 223 |
dense mesenchyme tissue | 5.09e-07 | 73 |
brain | 6.75e-07 | 68 |
future brain | 6.75e-07 | 68 |
paraxial mesoderm | 8.11e-07 | 72 |
presumptive paraxial mesoderm | 8.11e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.39e-10 | 22 |
germ cell cancer | 2.39e-10 | 22 |