FFCP PHASE1:Hg19::chr16:34980881..34980902,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000516136_5end | |association_with_transcript=0bp_to_ENST00000516136_5end | ||
|cluster_id=chr16:34980881..34980902,+ | |||
|coexpression_cluster_id=C464 | |||
|description=CAGE_peak_1_at_ENST00000516136_5end | |description=CAGE_peak_1_at_ENST00000516136_5end | ||
|id=chr16:34980881..34980902,+ | |id=chr16:34980881..34980902,+ | ||
|ontology_enrichment_celltype=CL:0002149!1.31e-33!6;CL:0002255!1.31e-33!6;CL:0000319!4.10e-23!1;CL:0000159!2.90e-12!2;CL:0000054!3.24e-12!2;CL:0000137!3.24e-12!2;CL:0000092!3.24e-12!2;CL:0000499!5.12e-08!27 | |ontology_enrichment_celltype=CL:0002149!1.31e-33!6;CL:0002255!1.31e-33!6;CL:0000319!4.10e-23!1;CL:0000159!2.90e-12!2;CL:0000054!3.24e-12!2;CL:0000137!3.24e-12!2;CL:0000092!3.24e-12!2;CL:0000499!5.12e-08!27 | ||
|ontology_enrichment_celltype_v019=CL:0002149;4.86e-23;6!CL:0002255;4.86e-23;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,4.86e-23,6;CL:0002255,4.86e-23,6 | |||
|ontology_enrichment_development_v019=UBERON:0005795;2.84e-14;10!UBERON:0007123;7.01e-08;5 | |||
|ontology_enrichment_disease=DOID:4468!5.00e-45!2;DOID:3001!1.31e-33!6;DOID:299!1.19e-31!25;DOID:3030!4.10e-23!1;DOID:0060085!5.13e-23!1;DOID:3165!5.13e-23!1;DOID:0060121!5.13e-23!1;DOID:2438!5.13e-23!1;DOID:4418!5.13e-23!1;DOID:120!1.26e-20!27;DOID:193!3.17e-19!29;DOID:200!3.24e-12!2;DOID:4305!3.24e-12!2;DOID:305!1.75e-07!106;DOID:0050687!2.04e-07!143;DOID:0060072!9.63e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:4468;2.84e-66;2!DOID:3001;4.86e-23;6!DOID:299;1.09e-21;25!DOID:120;3.90e-20;27!DOID:193;8.53e-19;29 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,2.84e-66,2;DOID:3001,4.86e-23,6;DOID:299,1.09e-21,25;DOID:120,3.90e-20,27;DOID:193,8.53e-19,29 | |||
|ontology_enrichment_uberon=UBERON:0000995!3.92e-10!21;UBERON:0005795!1.06e-09!22;UBERON:0003975!1.06e-09!22;UBERON:0004175!1.30e-08!25;UBERON:0000014!9.63e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000995;8.23e-09;17!UBERON:0003975;2.25e-08;18!UBERON:0002046;7.01e-08;5!UBERON:0004175;2.60e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,7.01e-08,5;UBERON:0004117,7.01e-08,5;UBERON:0007689,7.01e-08,5;UBERON:0007123,7.01e-08,5;UBERON:0003091,7.01e-08,5;UBERON:0000995,2.60e-07,21;UBERON:0005795,5.09e-07,22;UBERON:0003975,5.09e-07,22 | |||
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|short_description=p1@ENST00000516136 | |short_description=p1@ENST00000516136 | ||
}} | }} |
Latest revision as of 08:41, 25 July 2015
Short description: | p1@ENST00000516136 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000516136_5end |
Coexpression cluster: | C464_clear_serous_pagetoid_squamous_chorionic_thyroid_renal |
Association with transcript: | 0bp_to_ENST00000516136_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 4.86e-23 | 6 |
stromal cell of endometrium | 4.86e-23 | 6 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 7.01e-08 | 5 |
pharyngeal pouch | 7.01e-08 | 5 |
thyroid diverticulum | 7.01e-08 | 5 |
pharyngeal pouch 2 | 7.01e-08 | 5 |
thyroid primordium | 7.01e-08 | 5 |
uterus | 2.60e-07 | 21 |
embryonic uterus | 5.09e-07 | 22 |
internal female genitalia | 5.09e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 2.84e-66 | 2 |
female reproductive endometrioid cancer | 4.86e-23 | 6 |
adenocarcinoma | 1.09e-21 | 25 |
female reproductive organ cancer | 3.90e-20 | 27 |
reproductive organ cancer | 8.53e-19 | 29 |