FFCP PHASE1:Mm9::chr8:41596631..41596651,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18983 | |EntrezGene=18983 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=Q60809,Q543X5 | |UniProt=Q60809,Q543X5 | ||
|association_with_transcript=6bp_to_ENSMUST00000139558,ENSMUST00000149992,NM_011135,uc009lmq.1_5end | |association_with_transcript=6bp_to_ENSMUST00000139558,ENSMUST00000149992,NM_011135,uc009lmq.1_5end | ||
|cluster_id=chr8:41596631..41596651,- | |||
|description=CAGE_peak_3_at_Cnot7_5end | |description=CAGE_peak_3_at_Cnot7_5end | ||
|id=chr8:41596631..41596651,- | |id=chr8:41596631..41596651,- | ||
|ontology_enrichment_celltype=CL:0000540!5.86e-11!33;CL:0000047!5.86e-11!33;CL:0000031!5.86e-11!33;CL:0000404!5.86e-11!33;CL:0000393!4.91e-09!39;CL:0000211!4.91e-09!39;CL:0000117!2.41e-08!23;CL:0000337!2.41e-08!23;CL:0000221!1.10e-07!44;CL:0000133!1.10e-07!44;CL:0002319!1.63e-07!43 | |ontology_enrichment_celltype=CL:0000540!5.86e-11!33;CL:0000047!5.86e-11!33;CL:0000031!5.86e-11!33;CL:0000404!5.86e-11!33;CL:0000393!4.91e-09!39;CL:0000211!4.91e-09!39;CL:0000117!2.41e-08!23;CL:0000337!2.41e-08!23;CL:0000221!1.10e-07!44;CL:0000133!1.10e-07!44;CL:0002319!1.63e-07!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.47e-11,33;CL:0000047,1.47e-11,33;CL:0000031,1.47e-11,33;CL:0000404,1.47e-11,33;CL:0000393,1.18e-09,39;CL:0000211,1.18e-09,39;CL:0000117,8.85e-09,23;CL:0000337,8.85e-09,23;CL:0000221,5.78e-08,44;CL:0000133,5.78e-08,44;CL:0002319,8.80e-08,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.06e-11!73;UBERON:0005743!7.06e-11!73;UBERON:0000153!4.95e-10!94;UBERON:0000073!6.93e-10!75;UBERON:0001016!6.93e-10!75;UBERON:0002780!1.11e-09!39;UBERON:0001890!1.11e-09!39;UBERON:0006240!1.11e-09!39;UBERON:0003080!2.77e-09!40;UBERON:0003056!3.25e-09!49;UBERON:0002020!3.71e-09!34;UBERON:0007811!9.36e-09!86;UBERON:0002791!5.20e-08!29;UBERON:0003528!5.20e-08!29;UBERON:0001893!5.20e-08!29;UBERON:0001049!1.11e-07!52;UBERON:0005068!1.11e-07!52;UBERON:0006241!1.11e-07!52;UBERON:0007135!1.11e-07!52;UBERON:0000033!4.44e-07!63;UBERON:0000955!4.77e-07!50;UBERON:0006238!4.77e-07!50;UBERON:0002616!5.70e-07!49;UBERON:0002346!7.15e-07!71;UBERON:0003075!7.15e-07!71;UBERON:0007284!7.15e-07!71 | |ontology_enrichment_uberon=UBERON:0001017!7.06e-11!73;UBERON:0005743!7.06e-11!73;UBERON:0000153!4.95e-10!94;UBERON:0000073!6.93e-10!75;UBERON:0001016!6.93e-10!75;UBERON:0002780!1.11e-09!39;UBERON:0001890!1.11e-09!39;UBERON:0006240!1.11e-09!39;UBERON:0003080!2.77e-09!40;UBERON:0003056!3.25e-09!49;UBERON:0002020!3.71e-09!34;UBERON:0007811!9.36e-09!86;UBERON:0002791!5.20e-08!29;UBERON:0003528!5.20e-08!29;UBERON:0001893!5.20e-08!29;UBERON:0001049!1.11e-07!52;UBERON:0005068!1.11e-07!52;UBERON:0006241!1.11e-07!52;UBERON:0007135!1.11e-07!52;UBERON:0000033!4.44e-07!63;UBERON:0000955!4.77e-07!50;UBERON:0006238!4.77e-07!50;UBERON:0002616!5.70e-07!49;UBERON:0002346!7.15e-07!71;UBERON:0003075!7.15e-07!71;UBERON:0007284!7.15e-07!71 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.08e-10,73;UBERON:0002780,5.95e-10,39;UBERON:0001890,5.95e-10,39;UBERON:0006240,5.95e-10,39;UBERON:0001016,9.46e-10,75;UBERON:0002020,1.79e-09,34;UBERON:0003056,2.23e-09,49;UBERON:0003080,2.71e-09,40;UBERON:0002346,4.57e-09,64;UBERON:0003075,4.57e-09,64;UBERON:0007284,4.57e-09,64;UBERON:0000073,2.91e-08,54;UBERON:0003528,2.95e-08,29;UBERON:0002791,2.95e-08,29;UBERON:0001893,2.95e-08,29;UBERON:0001049,1.02e-07,52;UBERON:0005068,1.02e-07,52;UBERON:0006241,1.02e-07,52;UBERON:0007135,1.02e-07,52;UBERON:0004121,1.09e-07,95;UBERON:0000924,1.09e-07,95;UBERON:0006601,1.09e-07,95;UBERON:0010371,1.89e-07,73;UBERON:0000955,4.14e-07,47;UBERON:0006238,4.14e-07,47;UBERON:0002616,4.98e-07,46 | |||
|phase1_expression=2.88267924788629,1.74487703819681,0.909998478779072,0.90739263392049,2.50447864973174,2.85394762250213,2.33612640595526,4.26106967357202,0.703943610758334,0.468129052643987,0.513653904676515,1.43589886191606,2.39681021903688,4.54586092578786,0.666219523631325,0.404950534779652,0,2.68142840554502,1.50825876966313,2.12194825899015,1.61582251287033,0.496454756004426,0.783599367416806,0.799962113967033,2.2940928106717,2.29692785646008,3.01533397311352,1.939241094173,1.90023419456374,3.2763916868791,1.99557459589774,0,0,0,0.866554859253824,1.32987716286794,1.02084678131185,1.25559489221072,1.5626706890476,1.0470474879476,3.52938892818609,2.73218193983378,2.91306211818692,0.125896817975577,0.506884656097573,1.83546752161682,0,0.436050312760893,1.09843091367236,4.47188767870852,0.839918529752175,1.43752564364972,3.02008690903925,0.725362142011344,2.01656279485478,1.02903774414379,1.14613375975503,2.57836046138721,8.6996078169627,1.5869729378161,3.80298842103708,0.677689064138264,0,0,0,0,0.898800331555214,2.30530983192933,9.7468235569969,7.42532660824299,6.09942387919008,1.42825492201902,2.20868540951614,8.94182834269164,9.4887016308054,12.8690630125403,2.20231761998777,1.40456071893706,1.68967186581868,9.10015385338338,9.14876436024097,11.4600941522487,1.67509799400829,2.25105044012672,1.68078072554491,2.35702868378934,3.41692033917847,5.03278503728312,0.530083353332288,0.226714680320357,1.73918693221007,0,0.679971333707751,0,0.649776417447669,0.448026887097336,1.12355536105401,0.170430322578058,0.259786004602869,0.70667914902068,2.25349471642689,1.28326477414318,0,0,4.32982082022428,1.52015919285059,4.04419556011827,0.68510327831436,4.14300613835475,0.29688427812965,1.90833859442749,0.304465478312141,0.922461989024234,0.753613202763113,0.823120949949934,0.502666365318702,1.48316980640624,0.433798070759735,0,1.13236794963186,0.883366073841574,0,0,1.17112318804619,1.25668024088073,0.255457055208591,0.599075622529601,0,0.127070227073065,0.898743836428936,0.457500602818626,10.6806199295935,2.78118912307642,3.3243009452943,1.87009240103604,0.648965052271031,1.52759045775474,0.870848794270651,2.52722758433675,0.420883711772948,2.34216797332867,1.37941262660084,1.98068342785884,2.41127708537144,2.24520447199382,2.8185018462667,2.62364828767241,0.258703370739016,1.5089759505299,4.9167580843633,4.22282697993477,1.97276159184817,3.05851974148158,1.0447564995665,0.823128545631774,2.18937693500343,0,0,0,1.65700618028402,1.40715635988658,2.34080679899319,0.946978942340841,0.590292695242212,0.154267112887378,0,0.268273401399619,0.817357396570186,0.493679549740441,0.656669856316381,0.405344047729279,0.584799949701329,0,0.402619256281115,1.26173969138476,5.14523061896422,0.330418782983798,0.793351699990633,2.34617075588757,2.55460339046482,1.67527699718721,1.00841762311671,2.00140239460383,0.760902504450237,0.474529061544512,0.494096864172033,0.754005626400808,0.198956472041151,0.19496408711912,0.898819408654221,0.864552199498777,1.1948476395262,1.89667900953082,2.51346727741403,2.25415471346161,2.03651327845314,0.969762435838129,1.82353131714828,1.64414996523069,0.738050739898011,0.941992367048249,0.616985819609003,0,0.333690211432188,0,0.674586337154561,0.405720242777006,0.72353147925725,0.763877555344259,0.863088412352432,0.648540907100142,0,0,0,0.312037673114561,0.252578877947112,0,0.482443521363367,0.923765950833023,2.27389694124582,1.46668478797823,0.678980343100753,1.40814148973101,1.50755631697634,0.238043640886014,1.36593553500459,0.630540576424764,2.21464689648775,0.956728611944923,0.81931657357869,1.55416483679306,1.59113964439663,0,0,1.47529281905711,0.827810238914197,0.642202359951168,1.17211686592203,0.163934945376675,0,2.2085575359138,5.0757036758563,3.01592756825919,2.15071918157297,1.55959071857676,1.98153571552183,3.23848561339915,3.21481443702443,2.76701444562566,1.92792789853084,1.56134093729095,0.890328018336276,2.28041743095006,2.47455184458803,0,2.18502572539483,2.41858845571801,0.754420319023592,0.295301892880773,0.614870295887855,0.775284879504663,1.09060118843252,1.06949213515416,0,0,0,1.70219802876894,4.32146625675145,1.94038025674132,3.85806663056866,6.38424841112185,2.49716344642899,3.9491764944509,1.8267896946876,1.64270195644597,2.1183207086382,0.441056796109924,0.65954501176592,1.77610869365496,0.904693873922338,0.477489376012546,0.164140899745061,1.7488850197791,0.741701208042039,1.02522528478712,1.44470807574256,0.185194527369712,0.188368457004691,0.546776910884101,0.915112692826091,0.339956859987711,1.11961161858926,0.138199973804424,1.90934123603023,3.16335993581135,2.43983360552218,1.83609079397062,2.29997125615916,0.655087691238533,1.21377911746339,1.07449492442937,0,0.90730481304255,0.621339313086926,4.50954350947352,1.79419855252775,1.32366792365678,2.13896307178452,0.387479470433193,2.36538575687089,1.5256441023948,3.3853140059427,3.25063967719704,2.89900944991207,2.30424005006292,5.68820017130721,0.810900861160657,1.54066435747241,2.07873316764472,2.32734704367726,2.78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| ||
|short_description=p3@Cnot7 | |short_description=p3@Cnot7 | ||
}} | }} |
Latest revision as of 23:44, 1 October 2015
Short description: | p3@Cnot7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cnot7_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 6bp_to_ENSMUST00000139558, ENSMUST00000149992, NM_011135, uc009lmq.1_5end |
EntrezGene: | Cnot7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.47e-11 | 33 |
neuronal stem cell | 1.47e-11 | 33 |
neuroblast | 1.47e-11 | 33 |
electrically signaling cell | 1.47e-11 | 33 |
electrically responsive cell | 1.18e-09 | 39 |
electrically active cell | 1.18e-09 | 39 |
CNS neuron (sensu Vertebrata) | 8.85e-09 | 23 |
neuroblast (sensu Vertebrata) | 8.85e-09 | 23 |
ectodermal cell | 5.78e-08 | 44 |
neurectodermal cell | 5.78e-08 | 44 |
neural cell | 8.80e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.08e-10 | 73 |
regional part of forebrain | 5.95e-10 | 39 |
forebrain | 5.95e-10 | 39 |
future forebrain | 5.95e-10 | 39 |
nervous system | 9.46e-10 | 75 |
gray matter | 1.79e-09 | 34 |
pre-chordal neural plate | 2.23e-09 | 49 |
anterior neural tube | 2.71e-09 | 40 |
neurectoderm | 4.57e-09 | 64 |
neural plate | 4.57e-09 | 64 |
presumptive neural plate | 4.57e-09 | 64 |
regional part of nervous system | 2.91e-08 | 54 |
brain grey matter | 2.95e-08 | 29 |
regional part of telencephalon | 2.95e-08 | 29 |
telencephalon | 2.95e-08 | 29 |
neural tube | 1.02e-07 | 52 |
neural rod | 1.02e-07 | 52 |
future spinal cord | 1.02e-07 | 52 |
neural keel | 1.02e-07 | 52 |
ectoderm-derived structure | 1.09e-07 | 95 |
ectoderm | 1.09e-07 | 95 |
presumptive ectoderm | 1.09e-07 | 95 |
ecto-epithelium | 1.89e-07 | 73 |
brain | 4.14e-07 | 47 |
future brain | 4.14e-07 | 47 |
regional part of brain | 4.98e-07 | 46 |