FFCP PHASE1:Hg19::chr11:615942..615957,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3665 | |EntrezGene=3665 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6122 | |HGNC=6122 | ||
|TSSclassifier=strong | |||
|UniProt=B4E1B1 | |UniProt=B4E1B1 | ||
|association_with_transcript=0bp_to_ENST00000397562,ENST00000533182_5end | |association_with_transcript=0bp_to_ENST00000397562,ENST00000533182_5end | ||
|cluster_id=chr11:615942..615957,- | |||
|coexpression_cluster_id=C1638 | |||
|description=CAGE_peak_1_at_IRF7_5end | |description=CAGE_peak_1_at_IRF7_5end | ||
|id=chr11:615942..615957,- | |id=chr11:615942..615957,- | ||
|ontology_enrichment_celltype=CL:0000738!2.09e-32!140;CL:0002057!9.65e-27!42;CL:0002087!7.74e-26!119;CL:0000988!2.18e-25!182;CL:0002031!8.08e-25!124;CL:0000037!1.47e-24!172;CL:0000566!1.47e-24!172;CL:0002032!1.75e-22!165;CL:0000837!1.75e-22!165;CL:0000860!4.20e-22!45;CL:0000766!5.89e-22!76;CL:0000557!7.08e-19!71;CL:0002009!1.03e-18!65;CL:0002194!8.14e-18!63;CL:0000576!8.14e-18!63;CL:0000040!8.14e-18!63;CL:0000559!8.14e-18!63;CL:0000839!2.17e-16!70;CL:0000763!1.07e-14!112;CL:0000049!1.07e-14!112;CL:0000838!4.39e-08!52;CL:0000542!1.06e-07!53;CL:0000051!1.06e-07!53 | |ontology_enrichment_celltype=CL:0000738!2.09e-32!140;CL:0002057!9.65e-27!42;CL:0002087!7.74e-26!119;CL:0000988!2.18e-25!182;CL:0002031!8.08e-25!124;CL:0000037!1.47e-24!172;CL:0000566!1.47e-24!172;CL:0002032!1.75e-22!165;CL:0000837!1.75e-22!165;CL:0000860!4.20e-22!45;CL:0000766!5.89e-22!76;CL:0000557!7.08e-19!71;CL:0002009!1.03e-18!65;CL:0002194!8.14e-18!63;CL:0000576!8.14e-18!63;CL:0000040!8.14e-18!63;CL:0000559!8.14e-18!63;CL:0000839!2.17e-16!70;CL:0000763!1.07e-14!112;CL:0000049!1.07e-14!112;CL:0000838!4.39e-08!52;CL:0000542!1.06e-07!53;CL:0000051!1.06e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.92e-20;33!CL:0002057;4.92e-20;33!CL:0000473;5.66e-16;39!CL:0000234;5.66e-16;39!CL:0000576;2.39e-15;48!CL:0000766;9.45e-12;69!CL:0002087;4.85e-10;104!CL:0000738;3.25e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.37e-36,136;CL:0002087,3.79e-29,115;CL:0000988,4.32e-28,177;CL:0002031,5.78e-28,120;CL:0000037,4.62e-27,168;CL:0000860,9.61e-27,42;CL:0002057,9.61e-27,42;CL:0000766,6.06e-26,72;CL:0000473,2.16e-25,48;CL:0000234,2.16e-25,48;CL:0002032,6.58e-25,161;CL:0000837,6.58e-25,161;CL:0002009,1.06e-22,61;CL:0000557,1.18e-22,67;CL:0002194,9.27e-22,59;CL:0000576,9.27e-22,59;CL:0000040,9.27e-22,59;CL:0000559,9.27e-22,59;CL:0000839,7.29e-20,66;CL:0000763,4.95e-17,108;CL:0000049,4.95e-17,108;CL:0000838,4.39e-08,52;CL:0000542,1.06e-07,53;CL:0000051,1.06e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;1.74e-19;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.58e-25!112;UBERON:0002390!1.95e-24!102;UBERON:0003061!1.95e-24!102;UBERON:0002371!2.32e-16!80;UBERON:0002405!4.42e-16!115;UBERON:0001474!5.37e-14!86;UBERON:0004765!1.19e-10!101;UBERON:0001434!1.19e-10!101;UBERON:0003081!4.11e-10!216;UBERON:0000178!4.87e-07!15;UBERON:0000179!4.87e-07!15;UBERON:0000463!4.87e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.45e-07;15!UBERON:0000179;4.45e-07;15!UBERON:0000463;4.45e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.84e-28,108;UBERON:0002390,5.85e-28,98;UBERON:0003061,5.85e-28,98;UBERON:0002405,3.48e-22,93;UBERON:0002371,1.54e-19,76;UBERON:0001474,1.02e-16,82;UBERON:0004765,3.06e-15,90;UBERON:0001434,4.61e-12,100;UBERON:0003081,8.04e-11,203;UBERON:0000178,4.87e-07,15;UBERON:0000179,4.87e-07,15;UBERON:0000463,4.87e-07,15 | |||
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| ||
|short_description=p1@IRF7 | |short_description=p1@IRF7 | ||
}} | }} |
Latest revision as of 17:11, 18 September 2015
Short description: | p1@IRF7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IRF7_5end |
Coexpression cluster: | C1638_Dendritic_CD14_CD19_granulocyte_immature_acute_xeroderma |
Association with transcript: | 0bp_to_ENST00000397562, ENST00000533182_5end |
EntrezGene: | IRF7 |
HGNC: | 6122 |
UniProt: | B4E1B1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 7.37e-36 | 136 |
nongranular leukocyte | 3.79e-29 | 115 |
hematopoietic cell | 4.32e-28 | 177 |
hematopoietic lineage restricted progenitor cell | 5.78e-28 | 120 |
hematopoietic stem cell | 4.62e-27 | 168 |
classical monocyte | 9.61e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.61e-27 | 42 |
myeloid leukocyte | 6.06e-26 | 72 |
defensive cell | 2.16e-25 | 48 |
phagocyte | 2.16e-25 | 48 |
hematopoietic oligopotent progenitor cell | 6.58e-25 | 161 |
hematopoietic multipotent progenitor cell | 6.58e-25 | 161 |
macrophage dendritic cell progenitor | 1.06e-22 | 61 |
granulocyte monocyte progenitor cell | 1.18e-22 | 67 |
monopoietic cell | 9.27e-22 | 59 |
monocyte | 9.27e-22 | 59 |
monoblast | 9.27e-22 | 59 |
promonocyte | 9.27e-22 | 59 |
myeloid lineage restricted progenitor cell | 7.29e-20 | 66 |
myeloid cell | 4.95e-17 | 108 |
common myeloid progenitor | 4.95e-17 | 108 |
lymphoid lineage restricted progenitor cell | 4.39e-08 | 52 |
lymphocyte | 1.06e-07 | 53 |
common lymphoid progenitor | 1.06e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.84e-28 | 108 |
hematopoietic system | 5.85e-28 | 98 |
blood island | 5.85e-28 | 98 |
immune system | 3.48e-22 | 93 |
bone marrow | 1.54e-19 | 76 |
bone element | 1.02e-16 | 82 |
skeletal element | 3.06e-15 | 90 |
skeletal system | 4.61e-12 | 100 |
lateral plate mesoderm | 8.04e-11 | 203 |
blood | 4.87e-07 | 15 |
haemolymphatic fluid | 4.87e-07 | 15 |
organism substance | 4.87e-07 | 15 |