FFCP PHASE1:Hg19::chr11:60739249..60739254,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=923 | |EntrezGene=923 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1691 | |HGNC=1691 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=27bp_to_ENST00000545320_5end | |association_with_transcript=27bp_to_ENST00000545320_5end | ||
|cluster_id=chr11:60739249..60739254,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_3_at_CD6_5end | |description=CAGE_peak_3_at_CD6_5end | ||
|id=chr11:60739249..60739254,+ | |id=chr11:60739249..60739254,+ | ||
|ontology_enrichment_celltype=CL:0000791!1.29e-29!18;CL:0000789!1.29e-29!18;CL:0002420!1.29e-29!18;CL:0002419!1.29e-29!18;CL:0000790!1.29e-29!18;CL:0000084!1.39e-29!25;CL:0000827!1.39e-29!25;CL:0000542!2.02e-21!53;CL:0000051!2.02e-21!53;CL:0002087!9.22e-21!119;CL:0000738!1.12e-20!140;CL:0000838!3.98e-20!52;CL:0000624!2.96e-16!6;CL:0002031!8.55e-16!124;CL:0000037!1.17e-15!172;CL:0000566!1.17e-15!172;CL:0000988!3.51e-14!182;CL:0000625!3.64e-14!11;CL:0002032!9.80e-14!165;CL:0000837!9.80e-14!165;CL:0000898!8.30e-09!3;CL:0000623!9.93e-09!3;CL:0000825!9.93e-09!3;CL:0000842!2.85e-08!3 | |ontology_enrichment_celltype=CL:0000791!1.29e-29!18;CL:0000789!1.29e-29!18;CL:0002420!1.29e-29!18;CL:0002419!1.29e-29!18;CL:0000790!1.29e-29!18;CL:0000084!1.39e-29!25;CL:0000827!1.39e-29!25;CL:0000542!2.02e-21!53;CL:0000051!2.02e-21!53;CL:0002087!9.22e-21!119;CL:0000738!1.12e-20!140;CL:0000838!3.98e-20!52;CL:0000624!2.96e-16!6;CL:0002031!8.55e-16!124;CL:0000037!1.17e-15!172;CL:0000566!1.17e-15!172;CL:0000988!3.51e-14!182;CL:0000625!3.64e-14!11;CL:0002032!9.80e-14!165;CL:0000837!9.80e-14!165;CL:0000898!8.30e-09!3;CL:0000623!9.93e-09!3;CL:0000825!9.93e-09!3;CL:0000842!2.85e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.40e-35;18!CL:0000789;2.40e-35;18!CL:0002419;2.40e-35;18!CL:0000084;6.79e-35;25!CL:0000624;5.04e-33;6!CL:0000898;3.99e-17;3!CL:0000623;6.89e-17;3!CL:0000542;1.32e-13;53!CL:0000625;1.53e-12;11!CL:0000815;9.82e-12;2!CL:0000792;9.82e-12;2!CL:0002677;9.82e-12;2!CL:0000226;4.16e-08;3!CL:0000842;4.16e-08;3!CL:0000895;4.18e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.07e-35,18;CL:0000789,2.07e-35,18;CL:0002420,2.07e-35,18;CL:0002419,2.07e-35,18;CL:0000790,2.07e-35,18;CL:0000084,6.82e-35,25;CL:0000827,6.82e-35,25;CL:0000624,4.17e-33,6;CL:0000838,9.95e-24,52;CL:0000542,3.25e-23,53;CL:0000051,3.25e-23,53;CL:0000898,4.34e-17,3;CL:0000623,6.37e-17,3;CL:0000825,6.37e-17,3;CL:0002087,7.08e-13,115;CL:0000625,1.50e-12,11;CL:0000815,9.06e-12,2;CL:0000792,9.06e-12,2;CL:0002677,9.06e-12,2;CL:0000738,1.37e-11,136;CL:0002031,1.93e-09,120;CL:0000037,1.36e-08,168;CL:0000226,4.55e-08,3;CL:0000842,4.55e-08,3;CL:0000988,6.01e-08,177;CL:0002032,4.35e-07,161;CL:0000837,4.35e-07,161;CL:0000810,4.97e-07,1;CL:0000895,4.97e-07,1;CL:0002436,4.97e-07,1;CL:0002427,4.97e-07,1;CL:0002428,4.97e-07,1;CL:0002429,4.97e-07,1;CL:0002433,4.97e-07,1;CL:0002431,4.97e-07,1;CL:0002432,4.97e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000790;2.40e-35;18!CL:0000051;1.32e-13;53!CL:0002427;4.18e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;3.31e-07;1!DOID:0060061;3.31e-07;1!DOID:8691;3.31e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,3.32e-07,1;DOID:0060061,3.32e-07,1;DOID:8691,3.32e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!5.71e-12!15;UBERON:0000179!5.71e-12!15;UBERON:0000463!5.71e-12!15;UBERON:0002370!8.98e-10!4;UBERON:0005058!8.98e-10!4;UBERON:0009113!8.98e-10!4;UBERON:0003295!8.98e-10!4;UBERON:0005562!8.98e-10!4;UBERON:0002390!1.79e-09!102;UBERON:0003061!1.79e-09!102;UBERON:0002193!6.77e-09!112;UBERON:0004177!4.23e-08!7 | |ontology_enrichment_uberon=UBERON:0000178!5.71e-12!15;UBERON:0000179!5.71e-12!15;UBERON:0000463!5.71e-12!15;UBERON:0002370!8.98e-10!4;UBERON:0005058!8.98e-10!4;UBERON:0009113!8.98e-10!4;UBERON:0003295!8.98e-10!4;UBERON:0005562!8.98e-10!4;UBERON:0002390!1.79e-09!102;UBERON:0003061!1.79e-09!102;UBERON:0002193!6.77e-09!112;UBERON:0004177!4.23e-08!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.01e-08;15!UBERON:0000179;1.01e-08;15!UBERON:0000463;1.01e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.23e-08,15;UBERON:0000179,1.23e-08,15;UBERON:0000463,1.23e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91914699048606,0.154816123316076,0,0,0,0,0,0,0,1.00272223735071,0,0,0.32389366601898,0.257575567634187,0,0,0,0,0.411167888021826,0,0.28769239232215,0.256160706529101,0,0,0.645484683583826,0,0,0.272906150057846,0,0.612167784741805,0,0,0,0.199463657621632,0,0.290209238628584,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,3.14735632182133,3.93010762749165,2.46721798799411,1.17030546773475,2.28145586643513,0.946895611469467,1.94826728407911,2.1167986808183,1.47302953737419,0.443067789167242,0.270803863765016,1.40900451698243,2.73124629875744,3.12432018746985,2.76350017785848,3.18783394308558,2.22429844743091,2.1403266247177,3.1360657141493,2.83273356743915,3.06576394881537,2.40539211837841,1.77113784413652,0.637130828648193,0,0,0.602300476311091,1.15187950038977,1.24930726552346,0.710331756132051,0,6.45141578319144,5.08136371988664,3.47578569318718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,2.75843064282698,2.37190332345469,1.15508732651774,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,0.431428401637234,2.24127871387233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.01489521846434,0,1.13929437434833,0.476463550915578,0,0.648473311192717,0.540031437238115,0,0,0,0,0.185803175125719,0,0.426851060090485,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.79969750051832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0.258355639344024,0.496597714366863,0,0,0.202117188958219,0,0,0.471464371102113,0,0,0,0,0,0,0,0,0,0,0.805095174364105,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91914699048606,0.154816123316076,0,0,0,0,0,0,0,1.00272223735071,0,0,0.32389366601898,0.257575567634187,0,0,0,0,0.411167888021826,0,0.28769239232215,0.256160706529101,0,0,0.645484683583826,0,0,0.272906150057846,0,0.612167784741805,0,0,0,0.199463657621632,0,0.290209238628584,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,3.14735632182133,3.93010762749165,2.46721798799411,1.17030546773475,2.28145586643513,0.946895611469467,1.94826728407911,2.1167986808183,1.47302953737419,0.443067789167242,0.270803863765016,1.40900451698243,2.73124629875744,3.12432018746985,2.76350017785848,3.18783394308558,2.22429844743091,2.1403266247177,3.1360657141493,2.83273356743915,3.06576394881537,2.40539211837841,1.77113784413652,0.637130828648193,0,0,0.602300476311091,1.15187950038977,1.24930726552346,0.710331756132051,0,6.45141578319144,5.08136371988664,3.47578569318718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,2.75843064282698,2.37190332345469,1.15508732651774,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,0.431428401637234,2.24127871387233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.01489521846434,0,1.13929437434833,0.476463550915578,0,0.648473311192717,0.540031437238115,0,0,0,0,0.185803175125719,0,0.426851060090485,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.79969750051832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0.258355639344024,0.496597714366863,0,0,0.202117188958219,0,0,0.471464371102113,0,0,0,0,0,0,0,0,0,0,0.805095174364105,0 | ||
|short_description=p3@CD6 | |short_description=p3@CD6 | ||
}} | }} |
Latest revision as of 14:52, 18 September 2015
Short description: | p3@CD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CD6_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 27bp_to_ENST00000545320_5end |
EntrezGene: | CD6 |
HGNC: | 1691 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 1.23e-08 | 15 |
haemolymphatic fluid | 1.23e-08 | 15 |
organism substance | 1.23e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 3.32e-07 | 1 |
cutaneous T cell lymphoma | 3.32e-07 | 1 |
mycosis fungoides | 3.32e-07 | 1 |