FFCP PHASE1:Hg19::chr11:58537871..58537903,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:58537871..58537903,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_at_chr11:58537871..58537903,+ | |description=CAGE_peak_at_chr11:58537871..58537903,+ | ||
|id=chr11:58537871..58537903,+ | |id=chr11:58537871..58537903,+ | ||
|ontology_enrichment_celltype=CL:0000094!1.63e-18!8;CL:0000037!9.72e-15!172;CL:0000566!9.72e-15!172;CL:0000988!2.93e-13!182;CL:0000081!5.63e-13!11;CL:0002032!5.87e-13!165;CL:0000837!5.87e-13!165;CL:0000738!1.18e-12!140;CL:0000763!1.19e-09!112;CL:0000049!1.19e-09!112;CL:0000236!3.73e-09!14;CL:0000766!1.28e-08!76;CL:0002087!1.53e-08!119;CL:0000775!4.60e-08!3;CL:0000842!5.91e-08!3;CL:0000767!6.62e-08!3;CL:0002031!4.43e-07!124 | |ontology_enrichment_celltype=CL:0000094!1.63e-18!8;CL:0000037!9.72e-15!172;CL:0000566!9.72e-15!172;CL:0000988!2.93e-13!182;CL:0000081!5.63e-13!11;CL:0002032!5.87e-13!165;CL:0000837!5.87e-13!165;CL:0000738!1.18e-12!140;CL:0000763!1.19e-09!112;CL:0000049!1.19e-09!112;CL:0000236!3.73e-09!14;CL:0000766!1.28e-08!76;CL:0002087!1.53e-08!119;CL:0000775!4.60e-08!3;CL:0000842!5.91e-08!3;CL:0000767!6.62e-08!3;CL:0002031!4.43e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000094;1.67e-50;8!CL:0000081;1.87e-36;11!CL:0000775;3.39e-20;3!CL:0000226;6.29e-20;3!CL:0000842;6.29e-20;3!CL:0000767;6.71e-20;3!CL:0000771;5.62e-14;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,2.03e-50,8;CL:0000081,2.15e-36,11;CL:0000775,3.17e-20,3;CL:0000226,6.50e-20,3;CL:0000842,6.50e-20,3;CL:0000767,8.99e-20,3;CL:0000771,5.44e-14,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.08e-21!15;UBERON:0000179!1.08e-21!15;UBERON:0000463!1.08e-21!15;UBERON:0002390!5.02e-11!102;UBERON:0003061!5.02e-11!102;UBERON:0002193!2.32e-09!112;UBERON:0007023!9.35e-08!115 | |ontology_enrichment_uberon=UBERON:0000178!1.08e-21!15;UBERON:0000179!1.08e-21!15;UBERON:0000463!1.08e-21!15;UBERON:0002390!5.02e-11!102;UBERON:0003061!5.02e-11!102;UBERON:0002193!2.32e-09!112;UBERON:0007023!9.35e-08!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.83e-62;15!UBERON:0000179;5.83e-62;15!UBERON:0000463;5.83e-62;15!UBERON:0002390;6.50e-36;32!UBERON:0002193;2.15e-19;42!UBERON:0002106;3.10e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.00e-62,15;UBERON:0000179,6.00e-62,15;UBERON:0000463,6.00e-62,15;UBERON:0002390,2.47e-10,98;UBERON:0003061,2.47e-10,98;UBERON:0002106,2.51e-09,3;UBERON:0004854,2.51e-09,3;UBERON:0009034,2.51e-09,3;UBERON:0002095,2.51e-09,3;UBERON:0004782,2.51e-09,3;UBERON:0003281,2.51e-09,3;UBERON:0009664,2.51e-09,3;UBERON:0002296,2.51e-09,3;UBERON:0005602,2.51e-09,3;UBERON:0001179,2.51e-09,3;UBERON:0006293,2.51e-09,3;UBERON:0002193,3.90e-09,108;UBERON:0001009,1.63e-07,112 | |||
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| ||
|short_description=p@chr11:58537871..58537903,+ | |short_description=p@chr11:58537871..58537903,+ | ||
}} | }} |
Latest revision as of 23:06, 23 July 2015
Short description: | p@chr11:58537871..58537903, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:58537871..58537903, + |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 2.03e-50 | 8 |
blood cell | 2.15e-36 | 11 |
neutrophil | 3.17e-20 | 3 |
single nucleate cell | 6.50e-20 | 3 |
mononuclear cell | 6.50e-20 | 3 |
basophil | 8.99e-20 | 3 |
eosinophil | 5.44e-14 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 6.00e-62 | 15 |
haemolymphatic fluid | 6.00e-62 | 15 |
organism substance | 6.00e-62 | 15 |
hematopoietic system | 2.47e-10 | 98 |
blood island | 2.47e-10 | 98 |
spleen | 2.51e-09 | 3 |
gastrointestinal system mesentery | 2.51e-09 | 3 |
stomach region | 2.51e-09 | 3 |
mesentery | 2.51e-09 | 3 |
gastrointestinal system serosa | 2.51e-09 | 3 |
mesentery of stomach | 2.51e-09 | 3 |
gut mesentery | 2.51e-09 | 3 |
dorsal mesentery | 2.51e-09 | 3 |
dorsal mesogastrium | 2.51e-09 | 3 |
peritoneal cavity | 2.51e-09 | 3 |
spleen primordium | 2.51e-09 | 3 |
hemolymphoid system | 3.90e-09 | 108 |
circulatory system | 1.63e-07 | 112 |