FFCP PHASE1:Hg19::chr10:20105834..20105839,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:20105834..20105839,+
|short_description=p13@PLXDC2
|description=CAGE_peak_13_at_PLXDC2_5end
|association_with_transcript=462bp_to_NM_032812,uc001iqg.1,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84898 | |EntrezGene=84898 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=21013 | |HGNC=21013 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UX71 | |UniProt=Q6UX71 | ||
|association_with_transcript=462bp_to_NM_032812,uc001iqg.1,uc001iqh.1_5end | |||
|cluster_id=chr10:20105834..20105839,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_13_at_PLXDC2_5end | |||
|id=chr10:20105834..20105839,+ | |||
|ontology_enrichment_celltype=CL:0000766!5.97e-67!76;CL:0002194!1.75e-65!63;CL:0000576!1.75e-65!63;CL:0000040!1.75e-65!63;CL:0000559!1.75e-65!63;CL:0002057!9.10e-64!42;CL:0002009!6.13e-63!65;CL:0000557!7.72e-59!71;CL:0000860!1.60e-58!45;CL:0000839!3.26e-57!70;CL:0000763!9.30e-43!112;CL:0000049!9.30e-43!112;CL:0000738!2.10e-35!140;CL:0002087!9.33e-35!119;CL:0000037!1.71e-28!172;CL:0000566!1.71e-28!172;CL:0002031!1.72e-28!124;CL:0000988!8.21e-27!182;CL:0002032!5.96e-26!165;CL:0000837!5.96e-26!165;CL:0002393!4.06e-15!9;CL:0002397!4.06e-15!9;CL:0000094!2.75e-08!8;CL:0000081!2.05e-07!11;CL:0000775!6.91e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.17e-66;33!CL:0002057;3.17e-66;33!CL:0000576;4.39e-63;48!CL:0000473;2.92e-59;39!CL:0000234;2.92e-59;39!CL:0000766;4.71e-45;69!CL:0002393;1.14e-20;6!CL:0002397;1.14e-20;6!CL:0000763;3.54e-20;100!CL:0000094;4.91e-17;8!CL:0002087;1.87e-14;104!CL:0000738;4.65e-13;136!CL:0000775;7.19e-13;3!CL:0000081;3.38e-12;11!CL:0000875;1.43e-11;3!CL:0002396;1.43e-11;3!CL:0000988;8.01e-09;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.18e-103,48;CL:0000234,2.18e-103,48;CL:0000860,1.23e-100,42;CL:0002057,1.23e-100,42;CL:0000766,1.01e-98,72;CL:0002194,3.86e-90,59;CL:0000576,3.86e-90,59;CL:0000040,3.86e-90,59;CL:0000559,3.86e-90,59;CL:0002009,6.28e-87,61;CL:0000557,7.07e-83,67;CL:0000839,9.75e-80,66;CL:0000763,5.57e-66,108;CL:0000049,5.57e-66,108;CL:0000738,3.21e-50,136;CL:0002087,1.95e-44,115;CL:0002032,5.04e-41,161;CL:0000837,5.04e-41,161;CL:0000037,7.50e-41,168;CL:0002031,6.23e-40,120;CL:0000988,2.94e-38,177;CL:0002393,9.75e-31,9;CL:0002397,9.75e-31,9;CL:0000094,6.37e-17,8;CL:0000134,6.10e-14,354;CL:0002320,1.82e-13,361;CL:0000775,5.09e-13,3;CL:0000081,4.06e-12,11;CL:0000219,8.46e-12,386;CL:0000875,1.15e-11,3;CL:0002396,1.15e-11,3;CL:0000048,9.22e-10,427;CL:0000723,1.76e-09,433;CL:0000034,4.06e-09,441 | |||
|ontology_enrichment_development_v019=CL:0002057;5.44e-71;42!CL:0000049;3.38e-21;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000178;2.29e-14;15!UBERON:0000179;2.29e-14;15!UBERON:0000463;2.29e-14;15!UBERON:0002390;2.57e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.88e-80,98;UBERON:0003061,5.88e-80,98;UBERON:0002371,4.53e-72,76;UBERON:0002193,1.14e-71,108;UBERON:0001474,3.62e-66,82;UBERON:0004765,1.66e-59,90;UBERON:0002405,2.66e-57,93;UBERON:0001434,1.15e-52,100;UBERON:0003081,2.00e-33,203;UBERON:0002204,7.89e-28,167;UBERON:0000926,7.94e-18,315;UBERON:0004120,7.94e-18,315;UBERON:0006603,7.94e-18,315;UBERON:0000178,3.14e-14,15;UBERON:0000179,3.14e-14,15;UBERON:0000463,3.14e-14,15;UBERON:0002384,8.04e-13,371 | |||
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| ||
|short_description=p13@PLXDC2 | |||
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Latest revision as of 13:09, 17 September 2015
Short description: | p13@PLXDC2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_PLXDC2_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 462bp_to_NM_032812, uc001iqg.1, uc001iqh.1_5end |
EntrezGene: | PLXDC2 |
HGNC: | 21013 |
UniProt: | Q6UX71 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.88e-80 | 98 |
blood island | 5.88e-80 | 98 |
bone marrow | 4.53e-72 | 76 |
hemolymphoid system | 1.14e-71 | 108 |
bone element | 3.62e-66 | 82 |
skeletal element | 1.66e-59 | 90 |
immune system | 2.66e-57 | 93 |
skeletal system | 1.15e-52 | 100 |
lateral plate mesoderm | 2.00e-33 | 203 |
musculoskeletal system | 7.89e-28 | 167 |
mesoderm | 7.94e-18 | 315 |
mesoderm-derived structure | 7.94e-18 | 315 |
presumptive mesoderm | 7.94e-18 | 315 |
blood | 3.14e-14 | 15 |
haemolymphatic fluid | 3.14e-14 | 15 |
organism substance | 3.14e-14 | 15 |
connective tissue | 8.04e-13 | 371 |