FFCP PHASE1:Hg19::chr10:20105157..20105184,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:20105157..20105184,+
|short_description=p5@PLXDC2
|description=CAGE_peak_5_at_PLXDC2_5end
|association_with_transcript=0bp_to_ENST00000377238,ENST00000377...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84898 | |EntrezGene=84898 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21013 | |HGNC=21013 | ||
|UniProt=B7WP84, | |TSSclassifier=strong | ||
|UniProt=B7WP84,Q6UX71 | |||
|association_with_transcript=0bp_to_ENST00000377238,ENST00000377242,ENST00000377252_5end | |||
|cluster_id=chr10:20105157..20105184,+ | |||
|description=CAGE_peak_5_at_PLXDC2_5end | |||
|id=chr10:20105157..20105184,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.06e-12!42;CL:0000860!7.36e-11!45;CL:0000766!3.09e-10!76;CL:0002009!6.48e-10!65;CL:0002194!1.29e-09!63;CL:0000576!1.29e-09!63;CL:0000040!1.29e-09!63;CL:0000559!1.29e-09!63;CL:0000557!3.08e-09!71;CL:0000839!1.39e-08!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.57e-08;33!CL:0002057;1.57e-08;33!CL:0000473;2.88e-07;39!CL:0000234;2.88e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.21e-08,48;CL:0000234,5.21e-08,48;CL:0000860,5.84e-08,42;CL:0002057,5.84e-08,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.05e-24!115;UBERON:0001049!5.54e-17!57;UBERON:0005068!5.54e-17!57;UBERON:0006241!5.54e-17!57;UBERON:0007135!5.54e-17!57;UBERON:0003080!2.56e-15!42;UBERON:0002616!9.31e-15!59;UBERON:0002780!1.12e-14!41;UBERON:0001890!1.12e-14!41;UBERON:0006240!1.12e-14!41;UBERON:0002020!2.59e-14!34;UBERON:0003528!2.59e-14!34;UBERON:0002346!6.26e-14!90;UBERON:0002791!1.18e-13!33;UBERON:0001893!1.34e-13!34;UBERON:0000955!1.46e-13!69;UBERON:0006238!1.46e-13!69;UBERON:0001017!5.79e-13!82;UBERON:0001869!8.40e-13!32;UBERON:0003075!2.16e-12!86;UBERON:0007284!2.16e-12!86;UBERON:0005743!2.25e-12!86;UBERON:0002619!1.81e-11!22;UBERON:0000073!3.61e-11!94;UBERON:0001016!3.61e-11!94;UBERON:0000956!2.48e-10!25;UBERON:0000203!2.48e-10!25;UBERON:0001950!3.30e-10!20;UBERON:0003056!1.81e-09!61;UBERON:0000153!5.09e-08!129;UBERON:0007811!5.09e-08!129;UBERON:0000033!7.53e-08!123;UBERON:0002371!7.68e-08!80;UBERON:0002390!9.94e-08!102;UBERON:0003061!9.94e-08!102;UBERON:0000922!2.31e-07!612;UBERON:0000468!2.47e-07!659;UBERON:0001474!5.15e-07!86;UBERON:0000062!8.22e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;6.38e-12;32!UBERON:0003528;1.69e-11;34!UBERON:0002020;1.69e-11;34!UBERON:0001869;1.96e-10;32!UBERON:0002619;9.02e-10;22!UBERON:0001893;2.17e-09;34!UBERON:0002780;5.34e-09;41!UBERON:0001890;5.34e-09;41!UBERON:0002420;1.27e-08;9!UBERON:0000125;1.27e-08;9!UBERON:0007245;1.27e-08;9!UBERON:0002308;1.27e-08;9!UBERON:0010009;1.27e-08;9!UBERON:0010011;1.27e-08;9!UBERON:0000454;1.27e-08;9!UBERON:0000956;3.35e-08;25!UBERON:0000203;3.35e-08;25!UBERON:0001950;6.27e-08;20!UBERON:0009663;8.84e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,2.61e-14,34;UBERON:0002020,2.61e-14,34;UBERON:0001049,4.78e-13,56;UBERON:0005068,4.78e-13,56;UBERON:0006241,4.78e-13,56;UBERON:0007135,4.78e-13,56;UBERON:0002791,8.01e-13,32;UBERON:0001893,9.46e-12,34;UBERON:0001869,2.31e-11,32;UBERON:0002780,4.94e-11,41;UBERON:0001890,4.94e-11,41;UBERON:0003080,4.94e-11,41;UBERON:0006240,4.94e-11,41;UBERON:0000073,8.75e-11,53;UBERON:0002616,8.75e-11,53;UBERON:0002619,3.60e-10,22;UBERON:0001017,1.67e-09,81;UBERON:0000955,2.64e-09,68;UBERON:0006238,2.64e-09,68;UBERON:0000956,1.53e-08,25;UBERON:0000203,1.53e-08,25;UBERON:0002420,1.95e-08,9;UBERON:0007245,1.95e-08,9;UBERON:0010009,1.95e-08,9;UBERON:0010011,1.95e-08,9;UBERON:0000454,1.95e-08,9;UBERON:0001016,2.37e-08,89;UBERON:0001950,3.34e-08,20;UBERON:0000125,5.82e-08,9;UBERON:0002308,5.82e-08,9;UBERON:0002346,2.47e-07,86;UBERON:0007023,3.22e-07,114 | |||
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| ||
|short_description=p5@PLXDC2 | |||
}} | }} |
Latest revision as of 13:03, 17 September 2015
Short description: | p5@PLXDC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PLXDC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000377238, ENST00000377242, ENST00000377252_5end |
EntrezGene: | PLXDC2 |
HGNC: | 21013 |
UniProt: | B7WP84Q6UX71 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.21e-08 | 48 |
phagocyte | 5.21e-08 | 48 |
classical monocyte | 5.84e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.84e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
brain grey matter | 2.61e-14 | 34 |
gray matter | 2.61e-14 | 34 |
neural tube | 4.78e-13 | 56 |
neural rod | 4.78e-13 | 56 |
future spinal cord | 4.78e-13 | 56 |
neural keel | 4.78e-13 | 56 |
regional part of telencephalon | 8.01e-13 | 32 |
telencephalon | 9.46e-12 | 34 |
cerebral hemisphere | 2.31e-11 | 32 |
regional part of forebrain | 4.94e-11 | 41 |
forebrain | 4.94e-11 | 41 |
anterior neural tube | 4.94e-11 | 41 |
future forebrain | 4.94e-11 | 41 |
regional part of nervous system | 8.75e-11 | 53 |
regional part of brain | 8.75e-11 | 53 |
regional part of cerebral cortex | 3.60e-10 | 22 |
central nervous system | 1.67e-09 | 81 |
brain | 2.64e-09 | 68 |
future brain | 2.64e-09 | 68 |
cerebral cortex | 1.53e-08 | 25 |
pallium | 1.53e-08 | 25 |
basal ganglion | 1.95e-08 | 9 |
nuclear complex of neuraxis | 1.95e-08 | 9 |
aggregate regional part of brain | 1.95e-08 | 9 |
collection of basal ganglia | 1.95e-08 | 9 |
cerebral subcortex | 1.95e-08 | 9 |
nervous system | 2.37e-08 | 89 |
neocortex | 3.34e-08 | 20 |
neural nucleus | 5.82e-08 | 9 |
nucleus of brain | 5.82e-08 | 9 |
neurectoderm | 2.47e-07 | 86 |
adult organism | 3.22e-07 | 114 |