FFCP PHASE1:Hg19::chr11:57194948..57194962,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29015 | |EntrezGene=29015 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17466 | |HGNC=17466 | ||
|TSSclassifier=strong | |||
|UniProt=E9PLF2 | |UniProt=E9PLF2 | ||
|association_with_transcript=0bp_to_ENST00000533235_5end | |association_with_transcript=0bp_to_ENST00000533235_5end | ||
|cluster_id=chr11:57194948..57194962,- | |||
|description=CAGE_peak_10_at_SLC43A3_5end | |description=CAGE_peak_10_at_SLC43A3_5end | ||
|id=chr11:57194948..57194962,- | |id=chr11:57194948..57194962,- | ||
|ontology_enrichment_celltype=CL:0000055!1.07e-23!180;CL:0000057!8.41e-15!75;CL:0002620!1.68e-09!23;CL:0000680!2.86e-08!57;CL:0000056!2.86e-08!57;CL:0000355!2.86e-08!57;CL:0000359!9.50e-08!32;CL:0000187!3.54e-07!54;CL:0000183!8.52e-07!59 | |ontology_enrichment_celltype=CL:0000055!1.07e-23!180;CL:0000057!8.41e-15!75;CL:0002620!1.68e-09!23;CL:0000680!2.86e-08!57;CL:0000056!2.86e-08!57;CL:0000355!2.86e-08!57;CL:0000359!9.50e-08!32;CL:0000187!3.54e-07!54;CL:0000183!8.52e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002540;3.05e-09;6!CL:0000134;1.17e-07;55!CL:0000048;5.31e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002540,3.23e-09,6;CL:0000182,8.50e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;7.97e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.32e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0005256!2.90e-13!143;UBERON:0003104!4.03e-12!238;UBERON:0009142!4.03e-12!238;UBERON:0002100!1.21e-10!216;UBERON:0000914!3.94e-10!83;UBERON:0002329!3.94e-10!83;UBERON:0003077!3.94e-10!83;UBERON:0003059!3.94e-10!83;UBERON:0007282!3.94e-10!83;UBERON:0009618!3.94e-10!83;UBERON:0007285!3.94e-10!83;UBERON:0000475!4.43e-10!365;UBERON:0003102!2.33e-09!95;UBERON:0004290!3.22e-09!70;UBERON:0002199!9.41e-09!45;UBERON:0002416!9.41e-09!45;UBERON:0000481!1.22e-08!347;UBERON:0000486!1.32e-08!82;UBERON:0000468!2.78e-08!659;UBERON:0003914!3.98e-08!118;UBERON:0002385!4.82e-08!63;UBERON:0001015!4.82e-08!63;UBERON:0000383!4.82e-08!63;UBERON:0002097!6.27e-08!40;UBERON:0001134!1.26e-07!61;UBERON:0002036!1.26e-07!61;UBERON:0003082!1.26e-07!61;UBERON:0000926!3.95e-07!448;UBERON:0004120!3.95e-07!448;UBERON:0006603!3.95e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.422863212287913,1.0007329835313,0.446961094427288,0,0,0.631719873426831,0.522371256399677,0.245733936501509,0.697801167972428,0,0,0,0,1.34465029290355,0.602694528023977,0.730310090387373,0.487932798790507,0.492484232307152,0.816002764977012,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0.736555271975129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,1.00267582127178,0.434539556882471,0,0.486634870302636,0,0,0,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,1.72131935057184,0.573673241497627,0.354668382198357,0,1.06748995729705,0.49333509683432,0,0.269421344139376,0,0,0,0.234321431833797,0.936480230490962,0,0.896692083310806,0.587172493218824,0.647491777472526,0.702254033511242,0.408308342509787,0.245668634623536,0.206651562351531,0,0.494533858557114,0.910161361938026,0,0.673344455816265,0.125118519871964,0.277064115484183,0.438977620880838,1.22595118319608,0.751190294532984,0.113432183160021,0.358779271377724,0.427114777637135,0.635795703478686,0.600182192168805,0.103052529238439,0.257640540045629,0.37223371266318,0.675105328965065,0.194874010322397,0.757301322732344,0.552299391853796,0.323292113637624,1.06502877754984,0.503760491138201,1.01736355386293,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,3.12899064659632,0,0,0.928735856063958,1.44375896333917,1.0647612003586,0.505754070234305,0.482022059766964,0.330881918197182,0.871517776369625,0.71181185733329,1.34831308160164,0.784885860501384,0.38474715694639,0,1.40241773803446,0.4115740113314,0,3.80265104465493,1.96565443335525,1.18157981336281,0,0,0.171567810298526,0.439001141634502,3.37205259772859,0,0,1.3032332212413,0,0,0.115930404975077,0,0,0,0.380508304469197,0,0,0,0,0,0,0.335964256397719,0.425325291727159,0.179117045405697,0.581267877027924,0,0,0,0,0,0,0.825472625798197,2.29193055334967,0,0,1.33675740514321,3.30377363628309,0.571652865261156,0,0,0.2933531432838,1.16344544182,0,0.845302752556,0.26593811658487,0,0.257207374262142,0,1.3321108950805,0.285955987316295,1.62786481617433,0.823240336780769,0.65147236858747,0.355391948742546,0,0,0,0.299918973546171,0,0,0,0.239624855491583,1.14861935834114,0,0.434343920002738,0.821905290201534,0.537182889719687,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.49076596687656,0,0.542530047399471,0,0.178428988797162,0,0.117141414992713,1.20378439891088,0,0,0,0.368738337083406,0.521301686808497,0,0,0,0,0,0,0,0,1.48864684691266,0.767309866440312,0.841980283299221,0.256278298511402,0.511707249066704,0,0,0.154209693802656,0.355123450626254,1.8067974323038,1.55776328755086,0.697262270759755,0,0,0.184161977871793,0.114814448164607,0.182091168006717,0,0,0.15403067420883,0.784349769176855,0,0.105551628892876,0,0,0,3.08454505380579,0.270946437543853,0.501689773854853,0.254876273045038,0,0.223874754722178,0.219259876645935,0,0,0,1.30151357865721,0.309123034943167,0.0915694648183434,0,0,0,1.6068392984416,0.676695028044854,0.308097234229289,0.15350367472613,0.137836572484531,0.859361958946189,0.290033387828457,0.596586391912706,0,0,0,0,0,0,0.62962469366128,0,0,0.532306030317022,0,0.37064843820784,0.286249773483982,0,0,0.38126038784765,0.255897791311334,0,0.95460974377781,0.78494864019923,0.719489830333259,0,0.117812402345686,0.404364963146632,0,1.26377536871694,0,1.94970791705028,0,0,0,2.26016233240486,0.551365343546124,1.32687795048244,0.876901770507525,0.578775534266688,0,1.82619339266434,0.30982349809975,0,0.430234056612155,0.687743287091848,1.07001315444375,0,0.844430541190656,0.987884678879706,0,0.349934720244983,0.0962221127255121,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0.284136146806413,0,0,0,0,0,0.333926115068718,0,0,0.19924798825107,0.276283915531148,0,0,0,1.24415835064723,1.07842021376792,0,0,0.0986434056369336,0,0,0.969332746095218,0,0,0,0.262379999988587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,1.59518878185802,0,0,0,0.31900115973192,0.183195186803725,0,0,0.156980256395025,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0.296521128680622,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0.138674673013139,0,0.293977192243133,1.91530254476886,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,0,0.195551382734803,0.240476460754601,0,0.19980960958213,0,0,0,0,0,0.235694034616795,0,0.104602846312333,0.101998217636322,1.73370353940911,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0.199679000498991,0,0.446342914883745,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0.542999601753713,0,0.326587360109409,0,0,0,0,6.88795498286987,0,0,0,0,0,0.533937062838473,0,0.414239055347196,0,0,0,0,0.544017803369474,0,0,0.327872630709804,0,0,0.122026264901963,0,0,0.110929051536852,0.0620964029413835,0.415045904808692,0,0,1.14186133417987,0.470531639396343,0,0,0.149254802886874,0.467426619694449,0,3.03044808440143,1.25783950876288,2.66943366478961,3.66144109435078,0.604923695052956,0.466311601748341,1.33069634990671,1.11507737014592,7.64665290678128,0,0,0,1.04349012362347,1.35231848097497,0.380805212168795,0.406870733204662,1.27294061441792,0.751873899297419,0,1.19428766609585,0.800055529326307,0,0.336749488765919,0,0,0.214441591374926,0,0,0.231522474323834,0,0,0,0,0.706756583783524,0.38582807654183,0,0,0,0.911579868532147,0,0,0,0,0,0.245772908753719,0,0,0,0,0,1.65695355226657,0.279759015438889,0,0,0,0,0.109209638192014,0,0,0,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0.596748666348824,0.225630985047772,0,0,0,0.327543835020193,0.147856086217045,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0.227662191351298,0.177404740325278,0,0.857440047187092,0,0,0.118193840883968,0.444925607568277,0.156986185701028,0,0,0,0.215927591218621,0.9555033757741,0.0714765441766563,0,0,0,0,0.414432328326074,0.17071847709395,1.38251932362818,0,1.06498800657509,1.78948149994231,0.846774100381858,0.22910686854405,0.62041277132864,0,0,0.294450700845729,0.487671699929078,0,0.513314034281235,0,0.485710993059139,0,0,0,0,0.109940516745429,0,0.0771741581079447,0,0,0.490296643507811,0,0.196308467114945,0.297046400327086,0,0.509781344063451,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,2.22765053973577,0.202117188958219,0.435433495793923,0,0.0673520530145875,0.286888821570705,0.332660356546013,0.407016343054873,0,0,0,2.34640942403454,0.122241444182866,0,0,0,0 | |phase1_expression=0.363356758541113,0.214100523890983,0.422863212287913,1.0007329835313,0.446961094427288,0,0,0.631719873426831,0.522371256399677,0.245733936501509,0.697801167972428,0,0,0,0,1.34465029290355,0.602694528023977,0.730310090387373,0.487932798790507,0.492484232307152,0.816002764977012,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0.736555271975129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,1.00267582127178,0.434539556882471,0,0.486634870302636,0,0,0,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,1.72131935057184,0.573673241497627,0.354668382198357,0,1.06748995729705,0.49333509683432,0,0.269421344139376,0,0,0,0.234321431833797,0.936480230490962,0,0.896692083310806,0.587172493218824,0.647491777472526,0.702254033511242,0.408308342509787,0.245668634623536,0.206651562351531,0,0.494533858557114,0.910161361938026,0,0.673344455816265,0.125118519871964,0.277064115484183,0.438977620880838,1.22595118319608,0.751190294532984,0.113432183160021,0.358779271377724,0.427114777637135,0.635795703478686,0.600182192168805,0.103052529238439,0.257640540045629,0.37223371266318,0.675105328965065,0.194874010322397,0.757301322732344,0.552299391853796,0.323292113637624,1.06502877754984,0.503760491138201,1.01736355386293,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,3.12899064659632,0,0,0.928735856063958,1.44375896333917,1.0647612003586,0.505754070234305,0.482022059766964,0.330881918197182,0.871517776369625,0.71181185733329,1.34831308160164,0.784885860501384,0.38474715694639,0,1.40241773803446,0.4115740113314,0,3.80265104465493,1.96565443335525,1.18157981336281,0,0,0.171567810298526,0.439001141634502,3.37205259772859,0,0,1.3032332212413,0,0,0.115930404975077,0,0,0,0.380508304469197,0,0,0,0,0,0,0.335964256397719,0.425325291727159,0.179117045405697,0.581267877027924,0,0,0,0,0,0,0.825472625798197,2.29193055334967,0,0,1.33675740514321,3.30377363628309,0.571652865261156,0,0,0.2933531432838,1.16344544182,0,0.845302752556,0.26593811658487,0,0.257207374262142,0,1.3321108950805,0.285955987316295,1.62786481617433,0.823240336780769,0.65147236858747,0.355391948742546,0,0,0,0.299918973546171,0,0,0,0.239624855491583,1.14861935834114,0,0.434343920002738,0.821905290201534,0.537182889719687,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.49076596687656,0,0.542530047399471,0,0.178428988797162,0,0.117141414992713,1.20378439891088,0,0,0,0.368738337083406,0.521301686808497,0,0,0,0,0,0,0,0,1.48864684691266,0.767309866440312,0.841980283299221,0.256278298511402,0.511707249066704,0,0,0.154209693802656,0.355123450626254,1.8067974323038,1.55776328755086,0.697262270759755,0,0,0.184161977871793,0.114814448164607,0.182091168006717,0,0,0.15403067420883,0.784349769176855,0,0.105551628892876,0,0,0,3.08454505380579,0.270946437543853,0.501689773854853,0.254876273045038,0,0.223874754722178,0.219259876645935,0,0,0,1.30151357865721,0.309123034943167,0.0915694648183434,0,0,0,1.6068392984416,0.676695028044854,0.308097234229289,0.15350367472613,0.137836572484531,0.859361958946189,0.290033387828457,0.596586391912706,0,0,0,0,0,0,0.62962469366128,0,0,0.532306030317022,0,0.37064843820784,0.286249773483982,0,0,0.38126038784765,0.255897791311334,0,0.95460974377781,0.78494864019923,0.719489830333259,0,0.117812402345686,0.404364963146632,0,1.26377536871694,0,1.94970791705028,0,0,0,2.26016233240486,0.551365343546124,1.32687795048244,0.876901770507525,0.578775534266688,0,1.82619339266434,0.30982349809975,0,0.430234056612155,0.687743287091848,1.07001315444375,0,0.844430541190656,0.987884678879706,0,0.349934720244983,0.0962221127255121,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0.284136146806413,0,0,0,0,0,0.333926115068718,0,0,0.19924798825107,0.276283915531148,0,0,0,1.24415835064723,1.07842021376792,0,0,0.0986434056369336,0,0,0.969332746095218,0,0,0,0.262379999988587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,1.59518878185802,0,0,0,0.31900115973192,0.183195186803725,0,0,0.156980256395025,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0.296521128680622,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0.138674673013139,0,0.293977192243133,1.91530254476886,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,0,0.195551382734803,0.240476460754601,0,0.19980960958213,0,0,0,0,0,0.235694034616795,0,0.104602846312333,0.101998217636322,1.73370353940911,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0.199679000498991,0,0.446342914883745,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0.542999601753713,0,0.326587360109409,0,0,0,0,6.88795498286987,0,0,0,0,0,0.533937062838473,0,0.414239055347196,0,0,0,0,0.544017803369474,0,0,0.327872630709804,0,0,0.122026264901963,0,0,0.110929051536852,0.0620964029413835,0.415045904808692,0,0,1.14186133417987,0.470531639396343,0,0,0.149254802886874,0.467426619694449,0,3.03044808440143,1.25783950876288,2.66943366478961,3.66144109435078,0.604923695052956,0.466311601748341,1.33069634990671,1.11507737014592,7.64665290678128,0,0,0,1.04349012362347,1.35231848097497,0.380805212168795,0.406870733204662,1.27294061441792,0.751873899297419,0,1.19428766609585,0.800055529326307,0,0.336749488765919,0,0,0.214441591374926,0,0,0.231522474323834,0,0,0,0,0.706756583783524,0.38582807654183,0,0,0,0.911579868532147,0,0,0,0,0,0.245772908753719,0,0,0,0,0,1.65695355226657,0.279759015438889,0,0,0,0,0.109209638192014,0,0,0,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0.596748666348824,0.225630985047772,0,0,0,0.327543835020193,0.147856086217045,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0.227662191351298,0.177404740325278,0,0.857440047187092,0,0,0.118193840883968,0.444925607568277,0.156986185701028,0,0,0,0.215927591218621,0.9555033757741,0.0714765441766563,0,0,0,0,0.414432328326074,0.17071847709395,1.38251932362818,0,1.06498800657509,1.78948149994231,0.846774100381858,0.22910686854405,0.62041277132864,0,0,0.294450700845729,0.487671699929078,0,0.513314034281235,0,0.485710993059139,0,0,0,0,0.109940516745429,0,0.0771741581079447,0,0,0.490296643507811,0,0.196308467114945,0.297046400327086,0,0.509781344063451,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,2.22765053973577,0.202117188958219,0.435433495793923,0,0.0673520530145875,0.286888821570705,0.332660356546013,0.407016343054873,0,0,0,2.34640942403454,0.122241444182866,0,0,0,0 | ||
|short_description=p10@SLC43A3 | |short_description=p10@SLC43A3 | ||
}} | }} |
Latest revision as of 09:51, 18 September 2015
Short description: | p10@SLC43A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SLC43A3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000533235_5end |
EntrezGene: | SLC43A3 |
HGNC: | 17466 |
UniProt: | E9PLF2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of the bone marrow | 3.23e-09 | 6 |
hepatocyte | 8.50e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.32e-07 | 14 |