FFCP PHASE1:Hg19::chr16:2569613..2569643,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:2569613..2569643,+ | |||
|coexpression_cluster_id=C1758 | |||
|description=CAGE_peak_at_chr16:2569613..2569643,+ | |description=CAGE_peak_at_chr16:2569613..2569643,+ | ||
|id=chr16:2569613..2569643,+ | |id=chr16:2569613..2569643,+ | ||
|ontology_enrichment_celltype=CL:0000839!1.47e-10!70;CL:0000766!1.73e-10!76;CL:0002194!1.20e-09!63;CL:0000576!1.20e-09!63;CL:0000040!1.20e-09!63;CL:0000559!1.20e-09!63;CL:0002057!1.85e-09!42;CL:0000557!3.28e-09!71;CL:0000860!5.09e-09!45;CL:0002009!5.11e-09!65 | |ontology_enrichment_celltype=CL:0000839!1.47e-10!70;CL:0000766!1.73e-10!76;CL:0002194!1.20e-09!63;CL:0000576!1.20e-09!63;CL:0000040!1.20e-09!63;CL:0000559!1.20e-09!63;CL:0002057!1.85e-09!42;CL:0000557!3.28e-09!71;CL:0000860!5.09e-09!45;CL:0002009!5.11e-09!65 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.96e-12;39!CL:0000234;1.96e-12;39!CL:0000860;5.71e-12;33!CL:0002057;5.71e-12;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.88e-12,48;CL:0000234,2.88e-12,48;CL:0000766,3.46e-11,72;CL:0000839,3.55e-11,66;CL:0002194,2.94e-10,59;CL:0000576,2.94e-10,59;CL:0000040,2.94e-10,59;CL:0000559,2.94e-10,59;CL:0000557,8.98e-10,67;CL:0000860,1.04e-09,42;CL:0002057,1.04e-09,42;CL:0002009,1.75e-09,61 | |||
|ontology_enrichment_development_v019=CL:0002057;1.43e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!6.97e-13!659;UBERON:0000922!3.06e-11!612;UBERON:0003081!2.09e-10!216;UBERON:0002050!2.10e-10!605;UBERON:0005423!2.10e-10!605;UBERON:0000923!2.91e-10!604;UBERON:0005291!2.91e-10!604;UBERON:0006598!2.91e-10!604;UBERON:0002532!2.91e-10!604;UBERON:0000467!1.14e-09!625;UBERON:0000480!1.37e-09!626;UBERON:0007023!8.39e-08!115;UBERON:0002371!1.06e-07!80;UBERON:0002390!2.05e-07!102;UBERON:0003061!2.05e-07!102;UBERON:0002193!2.19e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002050,8.48e-13,564;UBERON:0000923,1.05e-12,560;UBERON:0010316,1.05e-12,560;UBERON:0005291,1.05e-12,560;UBERON:0006598,1.05e-12,560;UBERON:0010317,1.05e-12,560;UBERON:0002532,1.05e-12,560;UBERON:0005423,6.48e-12,581;UBERON:0000922,9.75e-12,592;UBERON:0003081,1.37e-10,203;UBERON:0000926,2.77e-10,315;UBERON:0004120,2.77e-10,315;UBERON:0006603,2.77e-10,315;UBERON:0002371,4.30e-08,76;UBERON:0002390,1.01e-07,98;UBERON:0003061,1.01e-07,98;UBERON:0002193,1.23e-07,108;UBERON:0007023,1.69e-07,114 | |||
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| ||
|short_description=p@chr16:2569613..2569643,+ | |short_description=p@chr16:2569613..2569643,+ | ||
}} | }} |
Latest revision as of 07:26, 25 July 2015
Short description: | p@chr16:2569613..2569643, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:2569613..2569643, + |
Coexpression cluster: | C1758_Monocytederived_Neutrophils_medial_Whole_Smooth_leiomyoma_amygdala |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.88e-12 | 48 |
phagocyte | 2.88e-12 | 48 |
myeloid leukocyte | 3.46e-11 | 72 |
myeloid lineage restricted progenitor cell | 3.55e-11 | 66 |
monopoietic cell | 2.94e-10 | 59 |
monocyte | 2.94e-10 | 59 |
monoblast | 2.94e-10 | 59 |
promonocyte | 2.94e-10 | 59 |
granulocyte monocyte progenitor cell | 8.98e-10 | 67 |
classical monocyte | 1.04e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.04e-09 | 42 |
macrophage dendritic cell progenitor | 1.75e-09 | 61 |
Ontology term | p-value | n |
---|---|---|
embryonic structure | 8.48e-13 | 564 |
germ layer | 1.05e-12 | 560 |
germ layer / neural crest | 1.05e-12 | 560 |
embryonic tissue | 1.05e-12 | 560 |
presumptive structure | 1.05e-12 | 560 |
germ layer / neural crest derived structure | 1.05e-12 | 560 |
epiblast (generic) | 1.05e-12 | 560 |
developing anatomical structure | 6.48e-12 | 581 |
embryo | 9.75e-12 | 592 |
lateral plate mesoderm | 1.37e-10 | 203 |
mesoderm | 2.77e-10 | 315 |
mesoderm-derived structure | 2.77e-10 | 315 |
presumptive mesoderm | 2.77e-10 | 315 |
bone marrow | 4.30e-08 | 76 |
hematopoietic system | 1.01e-07 | 98 |
blood island | 1.01e-07 | 98 |
hemolymphoid system | 1.23e-07 | 108 |
adult organism | 1.69e-07 | 114 |