FFCP PHASE1:Hg19::chr16:24741013..24741058,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27327 | |EntrezGene=27327 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11969 | |HGNC=11969 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NDV7 | |UniProt=Q8NDV7 | ||
|association_with_transcript=0bp_to_ENST00000315183,ENST00000395799,NM_014494,uc002dmm.2_5end | |association_with_transcript=0bp_to_ENST00000315183,ENST00000395799,NM_014494,uc002dmm.2_5end | ||
|cluster_id=chr16:24741013..24741058,+ | |||
|description=CAGE_peak_1_at_TNRC6A_5end | |description=CAGE_peak_1_at_TNRC6A_5end | ||
|id=chr16:24741013..24741058,+ | |id=chr16:24741013..24741058,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.41e-09!140;CL:0002087!3.79e-09!119;CL:0002031!5.98e-09!124;CL:0000037!1.09e-07!172;CL:0000566!1.09e-07!172;CL:0002057!5.90e-07!42;CL:0002032!7.41e-07!165;CL:0000837!7.41e-07!165 | |ontology_enrichment_celltype=CL:0000738!1.41e-09!140;CL:0002087!3.79e-09!119;CL:0002031!5.98e-09!124;CL:0000037!1.09e-07!172;CL:0000566!1.09e-07!172;CL:0002057!5.90e-07!42;CL:0002032!7.41e-07!165;CL:0000837!7.41e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.22e-08;33!CL:0002057;4.22e-08;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.67e-09,136;CL:0002087,4.29e-09,115;CL:0002031,6.89e-09,120;CL:0000037,1.38e-07,168;CL:0000860,5.90e-07,42;CL:0002057,5.90e-07,42;CL:0002032,9.29e-07,161;CL:0000837,9.29e-07,161 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.38e-18!115;UBERON:0001017!9.98e-11!82;UBERON:0000073!1.12e-10!94;UBERON:0001016!1.12e-10!94;UBERON:0005743!1.14e-09!86;UBERON:0001049!1.69e-09!57;UBERON:0005068!1.69e-09!57;UBERON:0006241!1.69e-09!57;UBERON:0007135!1.69e-09!57;UBERON:0003080!2.19e-08!42;UBERON:0002780!3.67e-08!41;UBERON:0001890!3.67e-08!41;UBERON:0006240!3.67e-08!41;UBERON:0000955!3.86e-08!69;UBERON:0006238!3.86e-08!69;UBERON:0002616!2.97e-07!59 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.96e-18,114;UBERON:0001016,1.62e-11,89;UBERON:0001017,1.65e-10,81;UBERON:0001049,2.82e-09,56;UBERON:0005068,2.82e-09,56;UBERON:0006241,2.82e-09,56;UBERON:0007135,2.82e-09,56;UBERON:0000073,1.40e-08,53;UBERON:0002616,1.40e-08,53;UBERON:0002780,3.67e-08,41;UBERON:0001890,3.67e-08,41;UBERON:0003080,3.67e-08,41;UBERON:0006240,3.67e-08,41;UBERON:0000955,6.19e-08,68;UBERON:0006238,6.19e-08,68 | |||
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| ||
|short_description=p1@TNRC6A | |short_description=p1@TNRC6A | ||
}} | }} |
Latest revision as of 18:35, 15 September 2015
Short description: | p1@TNRC6A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TNRC6A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000315183, ENST00000395799, NM_014494, uc002dmm.2_5end |
EntrezGene: | TNRC6A |
HGNC: | 11969 |
UniProt: | Q8NDV7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.67e-09 | 136 |
nongranular leukocyte | 4.29e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 6.89e-09 | 120 |
hematopoietic stem cell | 1.38e-07 | 168 |
classical monocyte | 5.90e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.90e-07 | 42 |
hematopoietic oligopotent progenitor cell | 9.29e-07 | 161 |
hematopoietic multipotent progenitor cell | 9.29e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.96e-18 | 114 |
nervous system | 1.62e-11 | 89 |
central nervous system | 1.65e-10 | 81 |
neural tube | 2.82e-09 | 56 |
neural rod | 2.82e-09 | 56 |
future spinal cord | 2.82e-09 | 56 |
neural keel | 2.82e-09 | 56 |
regional part of nervous system | 1.40e-08 | 53 |
regional part of brain | 1.40e-08 | 53 |
regional part of forebrain | 3.67e-08 | 41 |
forebrain | 3.67e-08 | 41 |
anterior neural tube | 3.67e-08 | 41 |
future forebrain | 3.67e-08 | 41 |
brain | 6.19e-08 | 68 |
future brain | 6.19e-08 | 68 |