FFCP PHASE1:Hg19::chr16:2094808..2094822,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:2094808..2094822,- | |||
|coexpression_cluster_id=C249 | |||
|description=CAGE_peak_at_chr16:2094808..2094822,- | |description=CAGE_peak_at_chr16:2094808..2094822,- | ||
|id=chr16:2094808..2094822,- | |id=chr16:2094808..2094822,- | ||
|ontology_enrichment_celltype=CL:0000071!3.31e-15!18;CL:0002546!3.31e-15!18;CL:0002139!4.45e-11!24;CL:1000413!1.34e-08!9;CL:0002544!1.10e-07!6;CL:0002144!2.64e-07!3;CL:0000115!3.41e-07!35 | |ontology_enrichment_celltype=CL:0000071!3.31e-15!18;CL:0002546!3.31e-15!18;CL:0002139!4.45e-11!24;CL:1000413!1.34e-08!9;CL:0002544!1.10e-07!6;CL:0002144!2.64e-07!3;CL:0000115!3.41e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0002553;6.62e-41;1!CL:0000322;1.83e-14;3!CL:0000082;2.17e-09;19!CL:0002544;7.25e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,6.62e-41,1;CL:0000322,1.83e-14,3;CL:0000082,2.17e-09,19;CL:0002544,7.25e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3493!6.36e-10!2 | |||
|ontology_enrichment_disease_v019=DOID:3111;9.91e-41;1!DOID:3603;9.91e-41;1!DOID:3910;5.70e-21;2!DOID:1324;1.27e-11;15!DOID:0050615;5.84e-11;16!DOID:3908;3.22e-09;5!DOID:1325;6.04e-07;7!DOID:3904;6.04e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,9.91e-41,1;DOID:3603,9.91e-41,1;DOID:3910,5.70e-21,2;DOID:1324,1.27e-11,15;DOID:0050615,5.84e-11,16;DOID:3908,3.22e-09,5;DOID:1325,6.04e-07,7;DOID:3904,6.04e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0000487!1.51e-15!22;UBERON:0001986!3.31e-15!18;UBERON:0004638!3.31e-15!18;UBERON:0004852!3.31e-15!18;UBERON:0006914!1.74e-13!25;UBERON:0003915!1.34e-08!9;UBERON:0004700!1.34e-08!9;UBERON:0001917!1.34e-08!9;UBERON:0001042!1.37e-07!10;UBERON:0009145!1.37e-07!10;UBERON:0001915!2.64e-07!3;UBERON:0001982!2.64e-07!3;UBERON:0006562!6.70e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;5.70e-21;2!UBERON:0002173;5.70e-21;2!UBERON:0002186;5.70e-21;2!UBERON:0004821;1.83e-14;3!UBERON:0007499;1.83e-14;3!UBERON:0003215;1.83e-14;3!UBERON:0010368;1.83e-14;3!UBERON:0009911;1.83e-14;3!UBERON:0002299;1.83e-14;3!UBERON:0006524;1.83e-14;3!UBERON:0008874;1.83e-14;3!UBERON:0002169;1.83e-14;3!UBERON:0004894;1.83e-14;3!UBERON:0009856;3.42e-11;4!UBERON:0004802;2.17e-09;19!UBERON:0000115;2.17e-09;19!UBERON:0002048;3.04e-08;22!UBERON:0004807;3.04e-08;22!UBERON:0000117;3.04e-08;22!UBERON:0000171;3.04e-08;22!UBERON:0000170;3.04e-08;22!UBERON:0000487;3.51e-08;22!UBERON:0006914;2.58e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,5.70e-21,2;UBERON:0002173,5.70e-21,2;UBERON:0002186,5.70e-21,2;UBERON:0004821,1.83e-14,3;UBERON:0003215,1.83e-14,3;UBERON:0010368,1.83e-14,3;UBERON:0009911,1.83e-14,3;UBERON:0002299,1.83e-14,3;UBERON:0006524,1.83e-14,3;UBERON:0008874,1.83e-14,3;UBERON:0002169,1.83e-14,3;UBERON:0004894,1.83e-14,3;UBERON:0004802,2.17e-09,19;UBERON:0000115,2.17e-09,19;UBERON:0002048,3.04e-08,22;UBERON:0000117,3.04e-08,22;UBERON:0000171,3.04e-08,22;UBERON:0000170,3.04e-08,22;UBERON:0005597,3.04e-08,22;UBERON:0000118,3.04e-08,22;UBERON:0000487,3.51e-08,22;UBERON:0006914,2.58e-07,25 | |||
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| ||
|short_description=p@chr16:2094808..2094822,- | |short_description=p@chr16:2094808..2094822,- | ||
}} | }} |
Latest revision as of 07:03, 25 July 2015
Short description: | p@chr16:2094808..2094822, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:2094808..2094822, - |
Coexpression cluster: | C249_nonsmall_small_smallcell_occipital_somatostatinoma_maxillary_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 6.62e-41 | 1 |
pneumocyte | 1.83e-14 | 3 |
epithelial cell of lung | 2.17e-09 | 19 |
aortic endothelial cell | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 5.70e-21 | 2 |
alveolar duct | 5.70e-21 | 2 |
bronchiole | 5.70e-21 | 2 |
pulmonary alveolus epithelium | 1.83e-14 | 3 |
alveolus | 1.83e-14 | 3 |
pulmonary lobule | 1.83e-14 | 3 |
lobule | 1.83e-14 | 3 |
alveolus of lung | 1.83e-14 | 3 |
alveolar system | 1.83e-14 | 3 |
pulmonary acinus | 1.83e-14 | 3 |
alveolar sac | 1.83e-14 | 3 |
alveolar wall | 1.83e-14 | 3 |
respiratory tract epithelium | 2.17e-09 | 19 |
lung epithelium | 2.17e-09 | 19 |
lung | 3.04e-08 | 22 |
respiratory tube | 3.04e-08 | 22 |
respiration organ | 3.04e-08 | 22 |
pair of lungs | 3.04e-08 | 22 |
lung primordium | 3.04e-08 | 22 |
lung bud | 3.04e-08 | 22 |
simple squamous epithelium | 3.51e-08 | 22 |
squamous epithelium | 2.58e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 9.91e-41 | 1 |
mucinous cystadenocarcinoma | 9.91e-41 | 1 |
lung adenocarcinoma | 5.70e-21 | 2 |
lung cancer | 1.27e-11 | 15 |
respiratory system cancer | 5.84e-11 | 16 |
non-small cell lung carcinoma | 3.22e-09 | 5 |
bronchus cancer | 6.04e-07 | 7 |
bronchogenic carcinoma | 6.04e-07 | 7 |