FFCP PHASE1:Hg19::chr11:47376627..47376644,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:47376627..47376644,- | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_at_chr11:47376627..47376644,- | |description=CAGE_peak_at_chr11:47376627..47376644,- | ||
|id=chr11:47376627..47376644,- | |id=chr11:47376627..47376644,- | ||
|ontology_enrichment_celltype=CL:0000766!9.73e-76!76;CL:0002194!1.09e-65!63;CL:0000576!1.09e-65!63;CL:0000040!1.09e-65!63;CL:0000559!1.09e-65!63;CL:0000839!2.59e-65!70;CL:0000557!3.68e-64!71;CL:0002009!3.46e-63!65;CL:0002057!6.54e-61!42;CL:0000763!2.25e-58!112;CL:0000049!2.25e-58!112;CL:0000860!5.84e-56!45;CL:0000738!4.68e-46!140;CL:0000037!1.31e-41!172;CL:0000566!1.31e-41!172;CL:0002032!6.32e-40!165;CL:0000837!6.32e-40!165;CL:0002087!5.58e-39!119;CL:0000988!3.79e-38!182;CL:0002031!8.83e-37!124;CL:0002393!1.30e-11!9;CL:0002397!1.30e-11!9;CL:0000134!1.50e-09!358;CL:0002320!5.06e-09!365;CL:0000094!1.16e-08!8;CL:0000775!1.76e-07!3;CL:0000219!3.35e-07!390 | |ontology_enrichment_celltype=CL:0000766!9.73e-76!76;CL:0002194!1.09e-65!63;CL:0000576!1.09e-65!63;CL:0000040!1.09e-65!63;CL:0000559!1.09e-65!63;CL:0000839!2.59e-65!70;CL:0000557!3.68e-64!71;CL:0002009!3.46e-63!65;CL:0002057!6.54e-61!42;CL:0000763!2.25e-58!112;CL:0000049!2.25e-58!112;CL:0000860!5.84e-56!45;CL:0000738!4.68e-46!140;CL:0000037!1.31e-41!172;CL:0000566!1.31e-41!172;CL:0002032!6.32e-40!165;CL:0000837!6.32e-40!165;CL:0002087!5.58e-39!119;CL:0000988!3.79e-38!182;CL:0002031!8.83e-37!124;CL:0002393!1.30e-11!9;CL:0002397!1.30e-11!9;CL:0000134!1.50e-09!358;CL:0002320!5.06e-09!365;CL:0000094!1.16e-08!8;CL:0000775!1.76e-07!3;CL:0000219!3.35e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.21e-63;33!CL:0002057;3.21e-63;33!CL:0000473;5.17e-56;39!CL:0000234;5.17e-56;39!CL:0000766;4.31e-33;69!CL:0000576;4.49e-33;48!CL:0000775;2.37e-21;3!CL:0000763;9.96e-17;100!CL:0000094;6.03e-14;8!CL:0002087;2.54e-10;104!CL:0000235;3.38e-10;6!CL:0000081;3.58e-10;11!CL:0000738;9.64e-10;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.10e-66,48;CL:0000234,2.10e-66,48;CL:0000766,1.03e-64,72;CL:0000860,2.03e-57,42;CL:0002057,2.03e-57,42;CL:0002194,4.72e-57,59;CL:0000576,4.72e-57,59;CL:0000040,4.72e-57,59;CL:0000559,4.72e-57,59;CL:0002009,4.55e-55,61;CL:0000839,1.26e-50,66;CL:0000557,8.16e-50,67;CL:0000763,9.57e-42,108;CL:0000049,9.57e-42,108;CL:0000738,3.28e-32,136;CL:0002087,2.53e-27,115;CL:0002032,1.79e-26,161;CL:0000837,1.79e-26,161;CL:0002031,5.27e-26,120;CL:0000037,3.60e-25,168;CL:0000988,1.21e-23,177;CL:0000775,2.37e-21,3;CL:0000094,5.57e-14,8;CL:0000081,3.38e-10,11;CL:0000235,4.43e-10,6;CL:0000134,2.75e-09,354;CL:0002320,5.26e-09,361;CL:0000219,5.18e-08,386;CL:0000034,3.53e-07,441;CL:0000048,8.55e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;4.63e-43;42!CL:0000049;1.24e-17;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.67e-61!102;UBERON:0003061!6.67e-61!102;UBERON:0002371!2.23e-57!80;UBERON:0002193!6.06e-56!112;UBERON:0001474!3.37e-52!86;UBERON:0002405!1.30e-44!115;UBERON:0004765!6.00e-42!101;UBERON:0001434!6.00e-42!101;UBERON:0003081!1.73e-22!216;UBERON:0002204!8.29e-21!167;UBERON:0002384!7.80e-09!375;UBERON:0007023!1.04e-07!115 | |ontology_enrichment_uberon=UBERON:0002390!6.67e-61!102;UBERON:0003061!6.67e-61!102;UBERON:0002371!2.23e-57!80;UBERON:0002193!6.06e-56!112;UBERON:0001474!3.37e-52!86;UBERON:0002405!1.30e-44!115;UBERON:0004765!6.00e-42!101;UBERON:0001434!6.00e-42!101;UBERON:0003081!1.73e-22!216;UBERON:0002204!8.29e-21!167;UBERON:0002384!7.80e-09!375;UBERON:0007023!1.04e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;5.89e-08;1!UBERON:0006518;5.89e-08;1!UBERON:0008949;5.89e-08;1!UBERON:0000101;5.89e-08;1!UBERON:0002167;5.89e-08;1!UBERON:0000029;1.18e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.82e-43,76;UBERON:0001474,5.35e-40,82;UBERON:0002405,4.82e-38,93;UBERON:0004765,4.39e-36,90;UBERON:0002390,8.44e-33,98;UBERON:0003061,8.44e-33,98;UBERON:0002193,3.63e-32,108;UBERON:0001434,4.64e-32,100;UBERON:0002204,1.95e-17,167;UBERON:0003081,1.55e-13,203;UBERON:0002384,1.28e-08,371;UBERON:0002171,5.33e-08,1;UBERON:0006518,5.33e-08,1;UBERON:0008949,5.33e-08,1;UBERON:0000101,5.33e-08,1;UBERON:0002167,5.33e-08,1;UBERON:0000029,7.45e-08,1;UBERON:0000926,4.47e-07,315;UBERON:0004120,4.47e-07,315;UBERON:0006603,4.47e-07,315 | |||
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| ||
|short_description=p@chr11:47376627..47376644,- | |short_description=p@chr11:47376627..47376644,- | ||
}} | }} |
Latest revision as of 22:34, 23 July 2015
Short description: | p@chr11:47376627..47376644, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:47376627..47376644, - |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.10e-66 | 48 |
phagocyte | 2.10e-66 | 48 |
myeloid leukocyte | 1.03e-64 | 72 |
classical monocyte | 2.03e-57 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.03e-57 | 42 |
monopoietic cell | 4.72e-57 | 59 |
monocyte | 4.72e-57 | 59 |
monoblast | 4.72e-57 | 59 |
promonocyte | 4.72e-57 | 59 |
macrophage dendritic cell progenitor | 4.55e-55 | 61 |
myeloid lineage restricted progenitor cell | 1.26e-50 | 66 |
granulocyte monocyte progenitor cell | 8.16e-50 | 67 |
myeloid cell | 9.57e-42 | 108 |
common myeloid progenitor | 9.57e-42 | 108 |
leukocyte | 3.28e-32 | 136 |
nongranular leukocyte | 2.53e-27 | 115 |
hematopoietic oligopotent progenitor cell | 1.79e-26 | 161 |
hematopoietic multipotent progenitor cell | 1.79e-26 | 161 |
hematopoietic lineage restricted progenitor cell | 5.27e-26 | 120 |
hematopoietic stem cell | 3.60e-25 | 168 |
hematopoietic cell | 1.21e-23 | 177 |
neutrophil | 2.37e-21 | 3 |
granulocyte | 5.57e-14 | 8 |
blood cell | 3.38e-10 | 11 |
macrophage | 4.43e-10 | 6 |
mesenchymal cell | 2.75e-09 | 354 |
connective tissue cell | 5.26e-09 | 361 |
motile cell | 5.18e-08 | 386 |
stem cell | 3.53e-07 | 441 |
multi fate stem cell | 8.55e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.82e-43 | 76 |
bone element | 5.35e-40 | 82 |
immune system | 4.82e-38 | 93 |
skeletal element | 4.39e-36 | 90 |
hematopoietic system | 8.44e-33 | 98 |
blood island | 8.44e-33 | 98 |
hemolymphoid system | 3.63e-32 | 108 |
skeletal system | 4.64e-32 | 100 |
musculoskeletal system | 1.95e-17 | 167 |
lateral plate mesoderm | 1.55e-13 | 203 |
connective tissue | 1.28e-08 | 371 |
lower lobe of right lung | 5.33e-08 | 1 |
right lung lobe | 5.33e-08 | 1 |
lower lobe of lung | 5.33e-08 | 1 |
lobe of lung | 5.33e-08 | 1 |
right lung | 5.33e-08 | 1 |
lymph node | 7.45e-08 | 1 |
mesoderm | 4.47e-07 | 315 |
mesoderm-derived structure | 4.47e-07 | 315 |
presumptive mesoderm | 4.47e-07 | 315 |