FFCP PHASE1:Hg19::chr10:14613879..14613893,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:14613879..14613893,-
|short_description=p8@FAM107B
|description=CAGE_peak_8_at_FAM107B_5end
|association_with_transcript=260bp_to_ENST00000452706,ENST0000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=83641 | |EntrezGene=83641 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23726 | |HGNC=23726 | ||
|TSSclassifier=strong | |||
|UniProt=C9JW51 | |UniProt=C9JW51 | ||
|association_with_transcript=260bp_to_ENST00000452706,ENST00000495292_5end | |||
|cluster_id=chr10:14613879..14613893,- | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_8_at_FAM107B_5end | |||
|id=chr10:14613879..14613893,- | |||
|ontology_enrichment_celltype=CL:0000791!2.01e-26!18;CL:0000789!2.01e-26!18;CL:0002420!2.01e-26!18;CL:0002419!2.01e-26!18;CL:0000790!2.01e-26!18;CL:0000625!1.73e-18!11;CL:0000084!2.11e-17!25;CL:0000827!2.11e-17!25;CL:0000624!1.82e-11!6;CL:0000094!3.19e-09!8;CL:0000838!1.05e-08!52;CL:0000542!1.96e-08!53;CL:0000051!1.96e-08!53;CL:0000738!6.05e-08!140 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.19e-60;18!CL:0000789;1.19e-60;18!CL:0002419;1.19e-60;18!CL:0000084;1.81e-42;25!CL:0000625;3.46e-41;11!CL:0000624;8.92e-25;6!CL:0000542;4.10e-13;53!CL:0000898;4.82e-13;3!CL:0000623;1.07e-12;3!CL:0000226;1.21e-12;3!CL:0000842;1.21e-12;3!CL:0000815;3.61e-09;2!CL:0000792;3.61e-09;2!CL:0002677;3.61e-09;2!CL:0000094;1.49e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.39e-60,18;CL:0000789,1.39e-60,18;CL:0002420,1.39e-60,18;CL:0002419,1.39e-60,18;CL:0000790,1.39e-60,18;CL:0000084,2.03e-42,25;CL:0000827,2.03e-42,25;CL:0000625,3.40e-41,11;CL:0000838,5.95e-26,52;CL:0000542,2.29e-25,53;CL:0000051,2.29e-25,53;CL:0000624,1.07e-24,6;CL:0000738,4.87e-20,136;CL:0002087,3.33e-18,115;CL:0000037,7.65e-15,168;CL:0000988,1.01e-13,177;CL:0000898,5.90e-13,3;CL:0002031,6.60e-13,120;CL:0000623,8.80e-13,3;CL:0000825,8.80e-13,3;CL:0000226,1.47e-12,3;CL:0000842,1.47e-12,3;CL:0002032,3.72e-12,161;CL:0000837,3.72e-12,161;CL:0000815,4.60e-09,2;CL:0000792,4.60e-09,2;CL:0002677,4.60e-09,2;CL:0000094,1.23e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000790;1.19e-60;18!CL:0000051;4.10e-13;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.18e-29!115;UBERON:0001049!5.30e-26!57;UBERON:0005068!5.30e-26!57;UBERON:0006241!5.30e-26!57;UBERON:0007135!5.30e-26!57;UBERON:0002616!5.07e-20!59;UBERON:0001017!9.05e-19!82;UBERON:0000955!1.24e-17!69;UBERON:0006238!1.24e-17!69;UBERON:0005743!2.26e-17!86;UBERON:0003075!1.01e-16!86;UBERON:0007284!1.01e-16!86;UBERON:0002780!1.84e-16!41;UBERON:0001890!1.84e-16!41;UBERON:0006240!1.84e-16!41;UBERON:0002346!2.04e-16!90;UBERON:0003080!6.63e-16!42;UBERON:0000073!8.67e-16!94;UBERON:0001016!8.67e-16!94;UBERON:0001893!3.13e-14!34;UBERON:0002020!3.49e-14!34;UBERON:0003528!3.49e-14!34;UBERON:0002791!1.79e-13!33;UBERON:0001869!3.80e-12!32;UBERON:0003076!5.94e-12!15;UBERON:0003057!5.94e-12!15;UBERON:0004732!8.70e-10!13;UBERON:0002308!3.31e-09!9;UBERON:0000125!3.31e-09!9;UBERON:0000153!3.60e-09!129;UBERON:0007811!3.60e-09!129;UBERON:0002619!3.67e-09!22;UBERON:0000178!6.10e-09!15;UBERON:0000179!6.10e-09!15;UBERON:0000463!6.10e-09!15;UBERON:0003056!6.97e-09!61;UBERON:0001950!7.85e-09!20;UBERON:0002298!1.46e-08!8;UBERON:0004733!1.79e-08!12;UBERON:0002028!1.79e-08!12;UBERON:0007277!1.79e-08!12;UBERON:0000033!3.91e-08!123;UBERON:0000956!1.02e-07!25;UBERON:0000203!1.02e-07!25;UBERON:0009663!4.42e-07!7;UBERON:0002420!5.54e-07!9;UBERON:0007245!5.54e-07!9;UBERON:0010009!5.54e-07!9;UBERON:0010011!5.54e-07!9;UBERON:0000454!5.54e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001897;1.85e-08;2!UBERON:0005162;1.85e-08;2!UBERON:0000122;1.85e-08;2!UBERON:0010225;1.85e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005162,1.39e-08,2;UBERON:0000122,1.39e-08,2;UBERON:0001897,2.47e-08,2;UBERON:0010225,2.47e-08,2 | |||
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| ||
|short_description=p8@FAM107B | |||
}} | }} |
Latest revision as of 07:35, 17 September 2015
Short description: | p8@FAM107B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_FAM107B_5end |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | 260bp_to_ENST00000452706, ENST00000495292_5end |
EntrezGene: | FAM107B |
HGNC: | 23726 |
UniProt: | C9JW51 |
Genome view: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.39e-60 | 18 |
alpha-beta T cell | 1.39e-60 | 18 |
immature T cell | 1.39e-60 | 18 |
mature T cell | 1.39e-60 | 18 |
immature alpha-beta T cell | 1.39e-60 | 18 |
T cell | 2.03e-42 | 25 |
pro-T cell | 2.03e-42 | 25 |
CD8-positive, alpha-beta T cell | 3.40e-41 | 11 |
lymphoid lineage restricted progenitor cell | 5.95e-26 | 52 |
lymphocyte | 2.29e-25 | 53 |
common lymphoid progenitor | 2.29e-25 | 53 |
CD4-positive, alpha-beta T cell | 1.07e-24 | 6 |
leukocyte | 4.87e-20 | 136 |
nongranular leukocyte | 3.33e-18 | 115 |
hematopoietic stem cell | 7.65e-15 | 168 |
hematopoietic cell | 1.01e-13 | 177 |
naive T cell | 5.90e-13 | 3 |
hematopoietic lineage restricted progenitor cell | 6.60e-13 | 120 |
natural killer cell | 8.80e-13 | 3 |
pro-NK cell | 8.80e-13 | 3 |
single nucleate cell | 1.47e-12 | 3 |
mononuclear cell | 1.47e-12 | 3 |
hematopoietic oligopotent progenitor cell | 3.72e-12 | 161 |
hematopoietic multipotent progenitor cell | 3.72e-12 | 161 |
regulatory T cell | 4.60e-09 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 4.60e-09 | 2 |
naive regulatory T cell | 4.60e-09 | 2 |
granulocyte | 1.23e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
multi cell component structure | 1.39e-08 | 2 |
neuron projection bundle | 1.39e-08 | 2 |
dorsal plus ventral thalamus | 2.47e-08 | 2 |
thalamic complex | 2.47e-08 | 2 |