FFCP PHASE1:Hg19::chr11:35548262..35548267,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:35548262..35548267,- | |||
|description=CAGE_peak_at_chr11:35548262..35548267,- | |description=CAGE_peak_at_chr11:35548262..35548267,- | ||
|id=chr11:35548262..35548267,- | |id=chr11:35548262..35548267,- | ||
|ontology_enrichment_celltype=CL:0002322!1.19e-07!5 | |ontology_enrichment_celltype=CL:0002322!1.19e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000540;1.12e-08;6!CL:0000404;1.12e-08;6!CL:0002262;4.17e-07;2!CL:1000398;4.17e-07;2!CL:0002363;4.17e-07;2!CL:0002583;4.17e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.08e-08,6;CL:0000031,1.08e-08,6;CL:0000404,1.08e-08,6;CL:0002262,3.48e-07,2;CL:1000398,3.48e-07,2;CL:0002583,4.98e-07,2;CL:0002363,5.60e-07,2;CL:0000008,5.60e-07,2;CL:0000047,9.94e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000031;1.12e-08;6!CL:0000008;4.17e-07;2 | |||
|ontology_enrichment_disease=DOID:3095!6.54e-09!22;DOID:2994!6.54e-09!22 | |ontology_enrichment_disease=DOID:3095!6.54e-09!22;DOID:2994!6.54e-09!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.74e-13;22!DOID:2994;1.74e-13;22!DOID:3193;4.17e-07;2!DOID:962;4.17e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.47e-13,22;DOID:2994,1.47e-13,22;DOID:3193,3.93e-07,2;DOID:962,3.93e-07,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001281;4.17e-07;2!UBERON:0003497;4.17e-07;2!UBERON:0003909;4.17e-07;2!UBERON:0003566;4.17e-07;2!UBERON:0003835;4.17e-07;2!UBERON:0001777;4.17e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,3.48e-07,2;UBERON:0003497,3.48e-07,2;UBERON:0003909,3.48e-07,2;UBERON:0003835,3.48e-07,2;UBERON:0003566,5.60e-07,2;UBERON:0001777,5.60e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0.125542639594803,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,1.14734648299525,0,0,0,0,0,0,0.163461903113459,0,0,0,0.312160076830321,0,0,0.23486899728753,0,0.561803226808994,0,0.61417158655884,0.103325781175765,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0.30648779579902,0.150238058906597,0,0.538168907066586,0.213557388818567,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.397589304964456,0.348581828608555,0.414644220061482,0.252320850875628,0,0,0,0,0.464367928031979,0,0,0.168584690078102,0.241011029883482,0,0,0.237270619111097,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.607724773004,0,1.04007436911366,0,0,0.799266537048298,0,0,0,0.325736184293735,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0.112085143993527,0,0,0,0,0,0,0,1.27587750330633,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,1.07946785661859,0,0,0,0.581051892299796,0,0,0.276242966807689,0.229628896329213,2.00300284807389,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0.460511024178389,0.689182862422653,0,0.145016693914229,0.426133137080504,0,0,0,0,0,0,1.25924938732256,0,0,0.532306030317022,0,0,0.286249773483982,0,0,0.38126038784765,0,0,0,0,0,0.274537029736055,0,0,1.58510321173008,0.421258456238981,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0,0.281695602532241,0,0,0,0,0,0,0,0.349934720244983,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0.313359791546046,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.910347586283997,0,0,0,0,0.694499979733169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0.167821586975843,0.189753732724185,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0.901940516486955,0.207376382794494,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0.0730893170861856,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0.144090417154106,0,0.171594997861965,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0.643012593860077,0.687697182986169,1.24632101408756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0.691743174681154,0.124980407962107,0,0,0.235265819698172,0,0,0,0,0,0.189403005275089,0,0,0.228840068396924,0.151230923763239,0,0.443565449968902,0,0,0.155262956876259,0,0.265841714557995,0,0,0,0.406870733204662,0,0,0,0,0.800055529326307,0,0,0,0,0,0.521988583930423,0,0.231522474323834,0,0,0.308801447160972,0,0.530067437837643,0,0,0,0,0,0,0,0,0,0.655219697692825,0,0.211312123358627,0,0,0,0,0,0,0,0.127894371303652,0,0.157265941855896,2.07498312564826,0.33946505990805,0,0.495743057036009,0,1.27201740261367,0,0,0,0.6124909547064,0,0,0.319267718114302,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0.20170506870352,0,0,0.327543835020193,0,0,0,0.413373593002368,0,0,0,0,4.22090986463089,0.127762427639595,0,0,0,0,0,0.230467975111559,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0.701818390386317,0.397901550322736,0,0,0.439762066981716,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0.436350690340377,0,0.743990036333503,0,0,2.14482922219634,2.62237372712869,0.380095503034311,0.407955318967927,1.87052183685892,0.0918948995348449,0.250707539292375,0,0,0,0.103432995861895,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0.213454691755431,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0.125542639594803,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,1.14734648299525,0,0,0,0,0,0,0.163461903113459,0,0,0,0.312160076830321,0,0,0.23486899728753,0,0.561803226808994,0,0.61417158655884,0.103325781175765,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0.30648779579902,0.150238058906597,0,0.538168907066586,0.213557388818567,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.397589304964456,0.348581828608555,0.414644220061482,0.252320850875628,0,0,0,0,0.464367928031979,0,0,0.168584690078102,0.241011029883482,0,0,0.237270619111097,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.607724773004,0,1.04007436911366,0,0,0.799266537048298,0,0,0,0.325736184293735,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0.112085143993527,0,0,0,0,0,0,0,1.27587750330633,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,1.07946785661859,0,0,0,0.581051892299796,0,0,0.276242966807689,0.229628896329213,2.00300284807389,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0.460511024178389,0.689182862422653,0,0.145016693914229,0.426133137080504,0,0,0,0,0,0,1.25924938732256,0,0,0.532306030317022,0,0,0.286249773483982,0,0,0.38126038784765,0,0,0,0,0,0.274537029736055,0,0,1.58510321173008,0.421258456238981,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0,0.281695602532241,0,0,0,0,0,0,0,0.349934720244983,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0.313359791546046,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.910347586283997,0,0,0,0,0.694499979733169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0.167821586975843,0.189753732724185,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0.901940516486955,0.207376382794494,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0.0730893170861856,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0.144090417154106,0,0.171594997861965,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0.643012593860077,0.687697182986169,1.24632101408756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0.691743174681154,0.124980407962107,0,0,0.235265819698172,0,0,0,0,0,0.189403005275089,0,0,0.228840068396924,0.151230923763239,0,0.443565449968902,0,0,0.155262956876259,0,0.265841714557995,0,0,0,0.406870733204662,0,0,0,0,0.800055529326307,0,0,0,0,0,0.521988583930423,0,0.231522474323834,0,0,0.308801447160972,0,0.530067437837643,0,0,0,0,0,0,0,0,0,0.655219697692825,0,0.211312123358627,0,0,0,0,0,0,0,0.127894371303652,0,0.157265941855896,2.07498312564826,0.33946505990805,0,0.495743057036009,0,1.27201740261367,0,0,0,0.6124909547064,0,0,0.319267718114302,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0.20170506870352,0,0,0.327543835020193,0,0,0,0.413373593002368,0,0,0,0,4.22090986463089,0.127762427639595,0,0,0,0,0,0.230467975111559,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0.701818390386317,0.397901550322736,0,0,0.439762066981716,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0.436350690340377,0,0.743990036333503,0,0,2.14482922219634,2.62237372712869,0.380095503034311,0.407955318967927,1.87052183685892,0.0918948995348449,0.250707539292375,0,0,0,0.103432995861895,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0.213454691755431,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:35548262..35548267,- | |short_description=p@chr11:35548262..35548267,- | ||
}} | }} |
Latest revision as of 21:59, 23 July 2015
Short description: | p@chr11:35548262..35548267, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:35548262..35548267, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.08e-08 | 6 |
neuroblast | 1.08e-08 | 6 |
electrically signaling cell | 1.08e-08 | 6 |
endothelial cell of sinusoid | 3.48e-07 | 2 |
endothelial cell of hepatic sinusoid | 3.48e-07 | 2 |
subcutaneous preadipocyte | 4.98e-07 | 2 |
keratocyte | 5.60e-07 | 2 |
migratory cranial neural crest cell | 5.60e-07 | 2 |
neuronal stem cell | 9.94e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 3.48e-07 | 2 |
abdomen blood vessel | 3.48e-07 | 2 |
sinusoid | 3.48e-07 | 2 |
abdominal segment blood vessel | 3.48e-07 | 2 |
head connective tissue | 5.60e-07 | 2 |
substantia propria of cornea | 5.60e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.47e-13 | 22 |
germ cell cancer | 1.47e-13 | 22 |
peripheral nerve sheath neoplasm | 3.93e-07 | 2 |
neurofibroma | 3.93e-07 | 2 |