FFCP PHASE1:Hg19::chr16:11720965..11720989,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:11720965..11720989,- | |||
|coexpression_cluster_id=C165 | |||
|description=CAGE_peak_at_chr16:11720965..11720989,- | |description=CAGE_peak_at_chr16:11720965..11720989,- | ||
|id=chr16:11720965..11720989,- | |id=chr16:11720965..11720989,- | ||
|ontology_enrichment_celltype=CL:0000039!1.09e-11!7;CL:0000586!1.09e-11!7;CL:0002150!1.23e-09!3;CL:0000861!1.23e-09!3 | |ontology_enrichment_celltype=CL:0000039!1.09e-11!7;CL:0000586!1.09e-11!7;CL:0002150!1.23e-09!3;CL:0000861!1.23e-09!3 | ||
|ontology_enrichment_celltype_v019=CL:0000840;1.80e-17;5!CL:0002541;1.37e-15;3!CL:0000990;7.56e-12;8!CL:0000083;7.94e-12;4!CL:0000451;8.60e-10;10!CL:0000317;9.81e-07;2!CL:1000448;9.81e-07;2!CL:0002308;9.81e-07;2!CL:0002140;9.81e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,1.80e-17,5;CL:0001029,1.80e-17,5;CL:0002541,1.06e-15,3;CL:0000083,7.52e-12,4;CL:0000990,7.57e-12,8;CL:0000451,8.60e-10,10;CL:0000317,9.02e-07,2;CL:1000448,9.02e-07,2;CL:0002308,9.02e-07,2;CL:0002140,9.02e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!7.79e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:6193;7.03e-13;1!DOID:1799;3.26e-12;1!DOID:10165;3.26e-12;1!DOID:1798;3.26e-12;1!DOID:1793;7.94e-12;4!DOID:170;3.50e-08;6!DOID:3350;4.56e-07;2!DOID:4468;6.07e-07;2!DOID:4074;9.81e-07;2!DOID:4905;9.81e-07;2!DOID:3498;9.81e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,7.03e-13,1;DOID:1799,3.85e-12,1;DOID:10165,3.85e-12,1;DOID:1798,3.85e-12,1;DOID:1793,7.52e-12,4;DOID:170,3.37e-08,6;DOID:3350,4.56e-07,2;DOID:4468,6.07e-07,2;DOID:4074,8.52e-07,2;DOID:4905,8.52e-07,2;DOID:3498,8.52e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0003343!3.71e-08!4;UBERON:0004785!3.71e-08!4;UBERON:0000974!6.54e-08!10;UBERON:0001045!1.74e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.37e-15;3!UBERON:0000920;1.37e-15;3!UBERON:0003343;2.84e-12;4!UBERON:0004785;2.84e-12;4!UBERON:0000974;1.77e-08;6!UBERON:0002419;9.81e-07;2!UBERON:0007771;9.81e-07;2!UBERON:0003297;9.81e-07;2!UBERON:0001821;9.81e-07;2!UBERON:0003487;9.81e-07;2!UBERON:0001820;9.81e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.06e-15,3;UBERON:0003343,2.76e-12,4;UBERON:0004785,2.76e-12,4;UBERON:0003124,3.05e-07,7;UBERON:0002419,9.02e-07,2;UBERON:0007771,9.02e-07,2;UBERON:0003297,9.02e-07,2;UBERON:0001821,9.02e-07,2;UBERON:0003487,9.02e-07,2;UBERON:0001820,9.02e-07,2;UBERON:0005089,9.02e-07,2;UBERON:0005088,9.02e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0.272906150057846,0,0.306083892370903,0.320929027076094,0,0.329851300186716,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,6.16640047943898,4.17911369518241,10.9025527625469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.91547074219827,0,0,0,0,0,0,0,10.5474479505126,0,0.19924798825107,0.828851746593443,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,1.16684937732704,0,2.23300811812344,0,1.5991043280559,0,0,0,0,0,0,0,0,7.38493225848095,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,1.56531695145672,0,0,0,0,0.063186579628488,0,0,0,0,0.313932918407225,0,0,0,0,0.195984794828755,0,0,50.7358795791269,0.0967563312890851,0.438535902517113,0.0821154570532092,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.017074150619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,1.0362910251936,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.9425096706979,4.83675865725735,0,0.115525666150338,0,0,0,0,0,0.781514011233092,1.04762677792569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0.357107877211315,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509944148709909,0.534434810531121,0.36757959813938,0,0,0,0,0,0,0,0.129177819672012,0.31037357147929,0.112131862580613,0,0,0,0,0.673520530145875,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0.272906150057846,0,0.306083892370903,0.320929027076094,0,0.329851300186716,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,6.16640047943898,4.17911369518241,10.9025527625469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.91547074219827,0,0,0,0,0,0,0,10.5474479505126,0,0.19924798825107,0.828851746593443,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,1.16684937732704,0,2.23300811812344,0,1.5991043280559,0,0,0,0,0,0,0,0,7.38493225848095,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,1.56531695145672,0,0,0,0,0.063186579628488,0,0,0,0,0.313932918407225,0,0,0,0,0.195984794828755,0,0,50.7358795791269,0.0967563312890851,0.438535902517113,0.0821154570532092,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.017074150619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,1.0362910251936,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.9425096706979,4.83675865725735,0,0.115525666150338,0,0,0,0,0,0.781514011233092,1.04762677792569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0.357107877211315,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509944148709909,0.534434810531121,0.36757959813938,0,0,0,0,0,0,0,0.129177819672012,0.31037357147929,0.112131862580613,0,0,0,0,0.673520530145875,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr16:11720965..11720989,- | |short_description=p@chr16:11720965..11720989,- | ||
}} | }} |
Latest revision as of 06:13, 25 July 2015
Short description: | p@chr16:11720965..11720989, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:11720965..11720989, - |
Coexpression cluster: | C165_epithelioid_Adipocyte_mesothelioma_myxofibrosarcoma_lung_gastric_Mesothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 1.80e-17 | 5 |
common dendritic progenitor | 1.80e-17 | 5 |
chorionic membrane mesenchymal stem cell | 1.06e-15 | 3 |
epithelial cell of pancreas | 7.52e-12 | 4 |
conventional dendritic cell | 7.57e-12 | 8 |
dendritic cell | 8.60e-10 | 10 |
sebum secreting cell | 9.02e-07 | 2 |
epithelial cell of sweat gland | 9.02e-07 | 2 |
epithelial cell of skin gland | 9.02e-07 | 2 |
acinar cell of sebaceous gland | 9.02e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.06e-15 | 3 |
mucosa of oral region | 2.76e-12 | 4 |
respiratory system mucosa | 2.76e-12 | 4 |
chorion | 3.05e-07 | 7 |
skin gland | 9.02e-07 | 2 |
epidermis gland | 9.02e-07 | 2 |
gland of integumental system | 9.02e-07 | 2 |
sebaceous gland | 9.02e-07 | 2 |
skin sebaceous gland | 9.02e-07 | 2 |
sweat gland | 9.02e-07 | 2 |
sweat gland placode | 9.02e-07 | 2 |
sebaceous gland placode | 9.02e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 7.03e-13 | 1 |
islet cell tumor | 3.85e-12 | 1 |
endocrine pancreas cancer | 3.85e-12 | 1 |
pancreatic endocrine carcinoma | 3.85e-12 | 1 |
pancreatic cancer | 7.52e-12 | 4 |
endocrine gland cancer | 3.37e-08 | 6 |
mesenchymal cell neoplasm | 4.56e-07 | 2 |
clear cell adenocarcinoma | 6.07e-07 | 2 |
pancreas adenocarcinoma | 8.52e-07 | 2 |
pancreatic carcinoma | 8.52e-07 | 2 |
pancreatic ductal adenocarcinoma | 8.52e-07 | 2 |