FFCP PHASE1:Hg19::chr10:135086004..135086013,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:135086004..135086013,-
|short_description=p5@ADAM8
|description=CAGE_peak_5_at_ADAM8_5end
|association_with_transcript=66bp_to_ENST00000561175_5end
|Entr...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=101 | |EntrezGene=101 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=215 | |HGNC=215 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=66bp_to_ENST00000561175_5end | |||
|cluster_id=chr10:135086004..135086013,- | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_5_at_ADAM8_5end | |||
|id=chr10:135086004..135086013,- | |||
|ontology_enrichment_celltype=CL:0002057!2.02e-67!42;CL:0000860!1.76e-62!45;CL:0000766!3.79e-56!76;CL:0000839!6.74e-50!70;CL:0000557!4.22e-49!71;CL:0002194!1.06e-48!63;CL:0000576!1.06e-48!63;CL:0000040!1.06e-48!63;CL:0000559!1.06e-48!63;CL:0002009!5.22e-47!65;CL:0000763!1.02e-35!112;CL:0000049!1.02e-35!112;CL:0000738!8.23e-31!140;CL:0002031!5.92e-29!124;CL:0002087!2.23e-26!119;CL:0002032!6.34e-25!165;CL:0000837!6.34e-25!165;CL:0000037!1.40e-23!172;CL:0000566!1.40e-23!172;CL:0000988!7.67e-22!182;CL:0000775!1.93e-14!3;CL:0000134!3.66e-07!358;CL:0002320!7.08e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000775;5.60e-67;3!CL:0000094;1.07e-25;8!CL:0000081;6.59e-19;11!CL:0000860;2.31e-15;33!CL:0002057;2.31e-15;33!CL:0000473;1.80e-13;39!CL:0000234;1.80e-13;39!CL:0000766;1.09e-08;69!CL:0000763;5.22e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,5.01e-67,3;CL:0000094,1.03e-25,8;CL:0000766,4.31e-19,72;CL:0000081,6.40e-19,11;CL:0000860,3.41e-13,42;CL:0002057,3.41e-13,42;CL:0000763,9.81e-13,108;CL:0000049,9.81e-13,108;CL:0000473,1.44e-11,48;CL:0000234,1.44e-11,48;CL:0000738,4.40e-10,136;CL:0002194,2.75e-09,59;CL:0000576,2.75e-09,59;CL:0000040,2.75e-09,59;CL:0000559,2.75e-09,59;CL:0002009,5.43e-09,61;CL:0002032,1.76e-08,161;CL:0000837,1.76e-08,161;CL:0000839,2.49e-08,66;CL:0000557,3.29e-08,67;CL:0000037,4.07e-08,168;CL:0000988,1.09e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.07e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.11e-43!80;UBERON:0002390!1.17e-39!102;UBERON:0003061!1.17e-39!102;UBERON:0001474!2.38e-39!86;UBERON:0002193!1.92e-35!112;UBERON:0004765!1.81e-32!101;UBERON:0001434!1.81e-32!101;UBERON:0002405!1.04e-29!115;UBERON:0002204!8.11e-17!167;UBERON:0003081!1.15e-14!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.89e-08,98;UBERON:0003061,5.89e-08,98;UBERON:0002371,2.92e-07,76;UBERON:0002193,3.23e-07,108;UBERON:0001474,9.67e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0.726991193897824,0.755751887377619,0.485168122375632,0.929716147622738,0.411167888021826,0.309706370895104,0.28769239232215,0.256160706529101,0.236482229888585,0.344745680736619,1.29096936716765,0,0.564727018627814,0,0.224723484445085,0.612167784741805,0.320929027076094,1.91801137739712,0.659702600373432,0,0.852449501065388,1.16083695451434,0.56738522469114,1.86846674698672,0.251248665256743,0.521482918420201,0,1.21079900526674,0.736555271975129,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0.288239906833923,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99602809578873,11.966458368161,7.0450637284126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0.726991193897824,0.755751887377619,0.485168122375632,0.929716147622738,0.411167888021826,0.309706370895104,0.28769239232215,0.256160706529101,0.236482229888585,0.344745680736619,1.29096936716765,0,0.564727018627814,0,0.224723484445085,0.612167784741805,0.320929027076094,1.91801137739712,0.659702600373432,0,0.852449501065388,1.16083695451434,0.56738522469114,1.86846674698672,0.251248665256743,0.521482918420201,0,1.21079900526674,0.736555271975129,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0.288239906833923,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99602809578873,11.966458368161,7.0450637284126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@ADAM8 | |||
}} | }} |
Latest revision as of 05:01, 17 September 2015
Short description: | p5@ADAM8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ADAM8_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 66bp_to_ENST00000561175_5end |
EntrezGene: | ADAM8 |
HGNC: | 215 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 5.01e-67 | 3 |
granulocyte | 1.03e-25 | 8 |
myeloid leukocyte | 4.31e-19 | 72 |
blood cell | 6.40e-19 | 11 |
classical monocyte | 3.41e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.41e-13 | 42 |
myeloid cell | 9.81e-13 | 108 |
common myeloid progenitor | 9.81e-13 | 108 |
defensive cell | 1.44e-11 | 48 |
phagocyte | 1.44e-11 | 48 |
leukocyte | 4.40e-10 | 136 |
monopoietic cell | 2.75e-09 | 59 |
monocyte | 2.75e-09 | 59 |
monoblast | 2.75e-09 | 59 |
promonocyte | 2.75e-09 | 59 |
macrophage dendritic cell progenitor | 5.43e-09 | 61 |
hematopoietic oligopotent progenitor cell | 1.76e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.76e-08 | 161 |
myeloid lineage restricted progenitor cell | 2.49e-08 | 66 |
granulocyte monocyte progenitor cell | 3.29e-08 | 67 |
hematopoietic stem cell | 4.07e-08 | 168 |
hematopoietic cell | 1.09e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.89e-08 | 98 |
blood island | 5.89e-08 | 98 |
bone marrow | 2.92e-07 | 76 |
hemolymphoid system | 3.23e-07 | 108 |
bone element | 9.67e-07 | 82 |