FFCP PHASE1:Hg19::chr10:134331775..134331789,-: Difference between revisions
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|id=chr10:134331775..134331789,-
|short_description=p2@ENST00000455414,p2@uc001lln.2
|description=CAGE_peak_2_at_ENST00000455414_5end,CAGE_peak_2_at_uc001lln.2_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-80bp_to_ENST00000455414,uc001lln.2_5end | |||
|cluster_id=chr10:134331775..134331789,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_2_at_ENST00000455414_5end,CAGE_peak_2_at_uc001lln.2_5end | |||
|id=chr10:134331775..134331789,- | |||
|ontology_enrichment_celltype=CL:0002322!2.81e-07!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.61e-13;1!UBERON:0010226;1.82e-13;1!UBERON:0004140;3.76e-13;1!UBERON:0005062;9.47e-13;4!UBERON:0007284;9.47e-13;4!UBERON:0003104;2.00e-12;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;8.49e-25;2!DOID:178;2.95e-13;1!DOID:326;2.95e-13;1!DOID:3978;2.95e-13;1!DOID:3394;2.95e-13;1!DOID:5844;2.95e-13;1!DOID:1287;6.64e-13;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,9.02e-25,2;DOID:178,2.95e-13,1;DOID:326,2.95e-13,1;DOID:3978,2.95e-13,1;DOID:3394,2.95e-13,1;DOID:5844,2.95e-13,1;DOID:1287,6.84e-13,4 | |||
|ontology_enrichment_uberon=UBERON:0003103!2.20e-09!69;UBERON:0000473!4.95e-09!8;UBERON:0003135!2.26e-08!11;UBERON:0003101!2.47e-07!22;UBERON:0000079!2.47e-07!22;UBERON:0007100!7.02e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.42e-37;25!UBERON:0000948;4.25e-19;22!UBERON:0004151;3.85e-17;3!UBERON:0003978;1.13e-16;3!UBERON:0000946;1.13e-16;3!UBERON:0002079;1.61e-13;1!UBERON:0002084;1.82e-13;1!UBERON:0002082;1.82e-13;1!UBERON:0002146;2.05e-13;1!UBERON:0005623;2.05e-13;1!UBERON:0005795;7.24e-13;1!UBERON:0002135;7.24e-13;1!UBERON:0003103;2.11e-11;61!UBERON:0002081;2.15e-07;2!UBERON:0002133;4.55e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.55e-34,27;UBERON:0003103,1.16e-19,68;UBERON:0000948,1.68e-17,24;UBERON:0005498,1.68e-17,24;UBERON:0004140,1.68e-17,24;UBERON:0009881,1.68e-17,24;UBERON:0004141,1.68e-17,24;UBERON:0003084,1.68e-17,24;UBERON:0007005,1.68e-17,24;UBERON:0004139,1.68e-17,24;UBERON:0004291,1.68e-17,24;UBERON:0004151,3.85e-17,3;UBERON:0003978,1.00e-16,3;UBERON:0009751,1.00e-16,3;UBERON:0000946,1.00e-16,3;UBERON:0002523,1.00e-16,3;UBERON:0005983,1.00e-16,3;UBERON:0002165,1.00e-16,3;UBERON:0002062,1.00e-16,3;UBERON:0007280,1.00e-16,3;UBERON:0002079,1.61e-13,1;UBERON:0002084,1.82e-13,1;UBERON:0002082,1.82e-13,1;UBERON:0010226,1.82e-13,1;UBERON:0002146,2.06e-13,1;UBERON:0005623,2.06e-13,1;UBERON:0002135,6.06e-13,1;UBERON:0004797,1.09e-07,7;UBERON:0001009,1.61e-07,112;UBERON:0002081,2.15e-07,2;UBERON:0010227,2.15e-07,2;UBERON:0002133,4.17e-07,2 | |||
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| ||
|short_description=p2@ENST00000455414,p2@uc001lln.2 | |||
}} | }} |
Latest revision as of 11:47, 23 July 2015
Short description: | p2@ENST00000455414, p2@uc001lln.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000455414_5end, CAGE_peak_2_at_uc001lln.2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -80bp_to_ENST00000455414, uc001lln.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.55e-34 | 27 |
compound organ | 1.16e-19 | 68 |
heart | 1.68e-17 | 24 |
primitive heart tube | 1.68e-17 | 24 |
primary heart field | 1.68e-17 | 24 |
anterior lateral plate mesoderm | 1.68e-17 | 24 |
heart tube | 1.68e-17 | 24 |
heart primordium | 1.68e-17 | 24 |
cardiac mesoderm | 1.68e-17 | 24 |
cardiogenic plate | 1.68e-17 | 24 |
heart rudiment | 1.68e-17 | 24 |
cardiac chamber | 3.85e-17 | 3 |
valve | 1.00e-16 | 3 |
cardiac mesenchyme | 1.00e-16 | 3 |
cardial valve | 1.00e-16 | 3 |
tunica intima | 1.00e-16 | 3 |
heart layer | 1.00e-16 | 3 |
endocardium | 1.00e-16 | 3 |
endocardial cushion | 1.00e-16 | 3 |
presumptive endocardium | 1.00e-16 | 3 |
left cardiac atrium | 1.61e-13 | 1 |
heart left ventricle | 1.82e-13 | 1 |
cardiac ventricle | 1.82e-13 | 1 |
future cardiac ventricle | 1.82e-13 | 1 |
pulmonary valve | 2.06e-13 | 1 |
semi-lunar valve | 2.06e-13 | 1 |
mitral valve | 6.06e-13 | 1 |
blood vessel layer | 1.09e-07 | 7 |
circulatory system | 1.61e-07 | 112 |
cardiac atrium | 2.15e-07 | 2 |
future cardiac atrium | 2.15e-07 | 2 |
atrioventricular valve | 4.17e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 9.02e-25 | 2 |
vascular disease | 2.95e-13 | 1 |
ischemia | 2.95e-13 | 1 |
extrinsic cardiomyopathy | 2.95e-13 | 1 |
myocardial ischemia | 2.95e-13 | 1 |
myocardial infarction | 2.95e-13 | 1 |
cardiovascular system disease | 6.84e-13 | 4 |