FFCP PHASE1:Hg19::chr16:1020954..1020991,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64788 | |EntrezGene=64788 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14154 | |HGNC=14154 | ||
|TSSclassifier=strong | |||
|UniProt=Q96S06,F5H152,F5H585,B4DH50,B3KS80,F5H802 | |UniProt=Q96S06,F5H152,F5H585,B4DH50,B3KS80,F5H802 | ||
|association_with_transcript=0bp_to_ENST00000262301,ENST00000399843,ENST00000539151,ENST00000539379,ENST00000543238,ENST00000545827,NM_022773,NR_033646,uc002ckj.2,uc010brh.2,uc010bri.2,uc010uuu.1,uc010uuv.1_5end | |association_with_transcript=0bp_to_ENST00000262301,ENST00000399843,ENST00000539151,ENST00000539379,ENST00000543238,ENST00000545827,NM_022773,NR_033646,uc002ckj.2,uc010brh.2,uc010bri.2,uc010uuu.1,uc010uuv.1_5end | ||
|cluster_id=chr16:1020954..1020991,- | |||
|description=CAGE_peak_2_at_LMF1_5end | |description=CAGE_peak_2_at_LMF1_5end | ||
|id=chr16:1020954..1020991,- | |id=chr16:1020954..1020991,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.80e-21!115;UBERON:0001049!1.29e-17!57;UBERON:0005068!1.29e-17!57;UBERON:0006241!1.29e-17!57;UBERON:0007135!1.29e-17!57;UBERON:0002616!3.54e-17!59;UBERON:0000073!6.17e-16!94;UBERON:0001016!6.17e-16!94;UBERON:0005743!6.36e-16!86;UBERON:0000955!8.73e-15!69;UBERON:0006238!8.73e-15!69;UBERON:0002346!1.02e-14!90;UBERON:0001017!1.30e-14!82;UBERON:0003075!2.96e-14!86;UBERON:0007284!2.96e-14!86;UBERON:0002780!1.48e-13!41;UBERON:0001890!1.48e-13!41;UBERON:0006240!1.48e-13!41;UBERON:0003080!3.61e-13!42;UBERON:0001893!3.03e-11!34;UBERON:0002791!4.66e-11!33;UBERON:0002020!4.87e-11!34;UBERON:0003528!4.87e-11!34;UBERON:0001869!3.54e-10!32;UBERON:0003056!4.44e-10!61;UBERON:0000025!1.77e-09!194;UBERON:0000153!6.97e-09!129;UBERON:0007811!6.97e-09!129;UBERON:0000033!1.80e-08!123;UBERON:0000924!2.34e-08!173;UBERON:0006601!2.34e-08!173;UBERON:0000956!4.88e-08!25;UBERON:0000203!4.88e-08!25;UBERON:0004121!6.10e-08!169;UBERON:0002619!8.08e-08!22;UBERON:0004111!3.20e-07!241;UBERON:0000475!3.37e-07!365;UBERON:0001950!3.81e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;2.19e-10;53!UBERON:0002616;2.19e-10;53!UBERON:0002780;3.04e-10;41!UBERON:0001890;3.04e-10;41!UBERON:0001893;1.16e-09;34!UBERON:0003528;2.05e-09;34!UBERON:0002020;2.05e-09;34!UBERON:0002791;2.05e-09;32!UBERON:0001869;3.27e-09;32!UBERON:0000956;5.18e-08;25!UBERON:0000203;5.18e-08;25!UBERON:0002619;9.34e-08;22!UBERON:0000955;1.24e-07;68!UBERON:0001017;2.07e-07;75!UBERON:0001950;4.42e-07;20!UBERON:0001016;7.56e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.57e-21,114;UBERON:0001049,5.24e-18,56;UBERON:0005068,5.24e-18,56;UBERON:0006241,5.24e-18,56;UBERON:0007135,5.24e-18,56;UBERON:0000073,1.10e-16,53;UBERON:0002616,1.10e-16,53;UBERON:0002346,8.60e-16,86;UBERON:0003075,2.43e-15,82;UBERON:0007284,2.43e-15,82;UBERON:0000955,4.51e-15,68;UBERON:0006238,4.51e-15,68;UBERON:0001016,7.15e-15,89;UBERON:0001017,7.37e-15,81;UBERON:0002780,1.48e-13,41;UBERON:0001890,1.48e-13,41;UBERON:0003080,1.48e-13,41;UBERON:0006240,1.48e-13,41;UBERON:0010314,2.31e-11,132;UBERON:0001893,3.03e-11,34;UBERON:0003528,4.87e-11,34;UBERON:0002020,4.87e-11,34;UBERON:0003056,1.08e-10,61;UBERON:0002791,1.74e-10,32;UBERON:0001869,3.54e-10,32;UBERON:0010371,4.71e-10,104;UBERON:0000025,1.90e-09,192;UBERON:0004121,1.03e-08,171;UBERON:0000924,1.03e-08,171;UBERON:0006601,1.03e-08,171;UBERON:0000956,4.87e-08,25;UBERON:0000203,4.87e-08,25;UBERON:0002619,8.07e-08,22;UBERON:0004111,2.68e-07,240;UBERON:0001950,3.81e-07,20 | |||
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| ||
|short_description=p2@LMF1 | |short_description=p2@LMF1 | ||
}} | }} |
Latest revision as of 04:00, 20 September 2015
Short description: | p2@LMF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LMF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000262301, ENST00000399843, ENST00000539151, ENST00000539379, ENST00000543238, ENST00000545827, NM_022773, NR_033646, uc002ckj.2, uc010brh.2, uc010bri.2, uc010uuu.1, uc010uuv.1_5end |
EntrezGene: | LMF1 |
HGNC: | 14154 |
UniProt: | Q96S06F5H152F5H585B4DH50B3KS80F5H802 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data