FFCP PHASE1:Hg19::chr10:134145373..134145398,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:134145373..134145398,-
|short_description=p3@STK32C
|description=CAGE_peak_3_at_STK32C_5end
|association_with_transcript=-17bp_to_uc009ybc.1,uc010quu.1_5e...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=282974 | |EntrezGene=282974 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21332 | |HGNC=21332 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-17bp_to_uc009ybc.1,uc010quu.1_5end | |||
|cluster_id=chr10:134145373..134145398,- | |||
|description=CAGE_peak_3_at_STK32C_5end | |||
|id=chr10:134145373..134145398,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!5.76e-13!365;UBERON:0001049!4.73e-12!57;UBERON:0005068!4.73e-12!57;UBERON:0006241!4.73e-12!57;UBERON:0007135!4.73e-12!57;UBERON:0003075!2.36e-11!86;UBERON:0007284!2.36e-11!86;UBERON:0000955!2.62e-11!69;UBERON:0006238!2.62e-11!69;UBERON:0007023!4.54e-11!115;UBERON:0000481!1.32e-10!347;UBERON:0002616!3.44e-10!59;UBERON:0005743!1.03e-09!86;UBERON:0000033!1.30e-09!123;UBERON:0002346!1.49e-09!90;UBERON:0000153!1.66e-09!129;UBERON:0007811!1.66e-09!129;UBERON:0001017!3.92e-09!82;UBERON:0000467!6.58e-09!625;UBERON:0000480!1.14e-08!626;UBERON:0000064!1.28e-08!219;UBERON:0000468!1.58e-08!659;UBERON:0000062!1.68e-08!511;UBERON:0000922!5.96e-08!612;UBERON:0000923!1.44e-07!604;UBERON:0005291!1.44e-07!604;UBERON:0006598!1.44e-07!604;UBERON:0002532!1.44e-07!604;UBERON:0000477!1.72e-07!286;UBERON:0000073!1.90e-07!94;UBERON:0001016!1.90e-07!94;UBERON:0002050!2.60e-07!605;UBERON:0005423!2.60e-07!605;UBERON:0003080!2.86e-07!42;UBERON:0002780!4.69e-07!41;UBERON:0001890!4.69e-07!41;UBERON:0006240!4.69e-07!41;UBERON:0004732!4.98e-07!13;UBERON:0000483!8.86e-07!309;UBERON:0003056!8.96e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;4.88e-07;53!UBERON:0002616;4.88e-07;53!UBERON:0004732;8.21e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.08e-12,56;UBERON:0005068,3.08e-12,56;UBERON:0006241,3.08e-12,56;UBERON:0007135,3.08e-12,56;UBERON:0003075,5.07e-12,82;UBERON:0007284,5.07e-12,82;UBERON:0000073,7.36e-12,53;UBERON:0002616,7.36e-12,53;UBERON:0000955,1.93e-11,68;UBERON:0006238,1.93e-11,68;UBERON:0007023,7.29e-11,114;UBERON:0010314,1.97e-10,132;UBERON:0002346,3.48e-10,86;UBERON:0010371,1.88e-09,104;UBERON:0001017,3.90e-09,81;UBERON:0002780,2.49e-07,41;UBERON:0001890,2.49e-07,41;UBERON:0003080,2.49e-07,41;UBERON:0006240,2.49e-07,41;UBERON:0004732,3.65e-07,13;UBERON:0003056,3.67e-07,61;UBERON:0003076,8.13e-07,15;UBERON:0003057,8.13e-07,15;UBERON:0000922,9.03e-07,592;UBERON:0000483,9.14e-07,306;UBERON:0001016,9.43e-07,89 | |||
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| ||
|short_description=p3@STK32C | |||
}} | }} |
Latest revision as of 03:52, 17 September 2015
Short description: | p3@STK32C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_STK32C_5end |
Coexpression cluster: | NA |
Association with transcript: | -17bp_to_uc009ybc.1, uc010quu.1_5end |
EntrezGene: | STK32C |
HGNC: | 21332 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 3.08e-12 | 56 |
neural rod | 3.08e-12 | 56 |
future spinal cord | 3.08e-12 | 56 |
neural keel | 3.08e-12 | 56 |
neural plate | 5.07e-12 | 82 |
presumptive neural plate | 5.07e-12 | 82 |
regional part of nervous system | 7.36e-12 | 53 |
regional part of brain | 7.36e-12 | 53 |
brain | 1.93e-11 | 68 |
future brain | 1.93e-11 | 68 |
adult organism | 7.29e-11 | 114 |
structure with developmental contribution from neural crest | 1.97e-10 | 132 |
neurectoderm | 3.48e-10 | 86 |
ecto-epithelium | 1.88e-09 | 104 |
central nervous system | 3.90e-09 | 81 |
regional part of forebrain | 2.49e-07 | 41 |
forebrain | 2.49e-07 | 41 |
anterior neural tube | 2.49e-07 | 41 |
future forebrain | 2.49e-07 | 41 |
segmental subdivision of nervous system | 3.65e-07 | 13 |
pre-chordal neural plate | 3.67e-07 | 61 |
posterior neural tube | 8.13e-07 | 15 |
chordal neural plate | 8.13e-07 | 15 |
embryo | 9.03e-07 | 592 |
epithelium | 9.14e-07 | 306 |
nervous system | 9.43e-07 | 89 |