FFCP PHASE1:Hg19::chr10:134143462..134143482,-: Difference between revisions
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|id=chr10:134143462..134143482,-
|short_description=p@chr10:134143462..134143482,-
|description=CAGE_peak_at_chr10:134143462..134143482,-
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:134143462..134143482,- | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_at_chr10:134143462..134143482,- | |||
|id=chr10:134143462..134143482,- | |||
|ontology_enrichment_celltype=CL:0000860!3.97e-29!45;CL:0000839!1.21e-28!70;CL:0000557!6.58e-26!71;CL:0000766!8.56e-26!76;CL:0002057!1.82e-23!42;CL:0002194!1.21e-20!63;CL:0000576!1.21e-20!63;CL:0000040!1.21e-20!63;CL:0000559!1.21e-20!63;CL:0002009!7.88e-20!65;CL:0000763!6.71e-18!112;CL:0000049!6.71e-18!112;CL:0002031!2.55e-15!124;CL:0000738!9.81e-14!140;CL:0000037!1.45e-11!172;CL:0000566!1.45e-11!172;CL:0002032!1.76e-11!165;CL:0000837!1.76e-11!165;CL:0002274!2.09e-11!5;CL:0000457!2.09e-11!5;CL:0002191!2.09e-11!5;CL:0000097!2.09e-11!5;CL:0000831!2.09e-11!5;CL:0002028!2.09e-11!5;CL:0002087!4.45e-11!119;CL:0000988!1.73e-10!182;CL:0002150!2.56e-09!3;CL:0000861!2.56e-09!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.28e-54;33!CL:0002057;2.28e-54;33!CL:0000473;1.70e-37;39!CL:0000234;1.70e-37;39!CL:0000097;1.29e-34;5!CL:0000576;2.93e-29;48!CL:0000766;5.23e-22;69!CL:0000163;2.18e-19;9!CL:0000763;3.01e-13;100!CL:0000738;1.00e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,2.43e-48,66;CL:0000557,1.34e-47,67;CL:0000860,1.52e-46,42;CL:0002057,1.52e-46,42;CL:0000766,3.43e-44,72;CL:0000473,1.70e-40,48;CL:0000234,1.70e-40,48;CL:0000097,1.19e-34,5;CL:0002028,1.19e-34,5;CL:0002194,5.12e-32,59;CL:0000576,5.12e-32,59;CL:0000040,5.12e-32,59;CL:0000559,5.12e-32,59;CL:0002009,6.36e-31,61;CL:0000763,7.31e-29,108;CL:0000049,7.31e-29,108;CL:0002031,8.97e-26,120;CL:0000738,1.71e-22,136;CL:0000163,2.08e-19,9;CL:0002032,1.17e-18,161;CL:0000837,1.17e-18,161;CL:0000037,8.73e-18,168;CL:0000988,9.16e-17,177;CL:0002087,1.35e-15,115;CL:0000134,3.98e-07,354;CL:0002320,6.16e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;4.76e-38;42!CL:0000049;4.48e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.13e-24!80;UBERON:0001474!6.44e-22!86;UBERON:0002390!8.47e-22!102;UBERON:0003061!8.47e-22!102;UBERON:0002193!3.91e-19!112;UBERON:0004765!4.88e-19!101;UBERON:0001434!4.88e-19!101;UBERON:0002405!9.23e-16!115;UBERON:0002204!3.12e-12!167;UBERON:0003081!8.14e-10!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.79e-42,76;UBERON:0001474,1.33e-38,82;UBERON:0004765,5.14e-35,90;UBERON:0002405,7.93e-34,93;UBERON:0002390,5.25e-32,98;UBERON:0003061,5.25e-32,98;UBERON:0001434,2.50e-31,100;UBERON:0002193,7.31e-29,108;UBERON:0002204,3.70e-20,167;UBERON:0003081,2.57e-14,203;UBERON:0000926,1.52e-09,315;UBERON:0004120,1.52e-09,315;UBERON:0006603,1.52e-09,315 | |||
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| ||
|short_description=p@chr10:134143462..134143482,- | |||
}} | }} |
Latest revision as of 11:45, 23 July 2015
Short description: | p@chr10:134143462..134143482, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:134143462..134143482, - |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 2.43e-48 | 66 |
granulocyte monocyte progenitor cell | 1.34e-47 | 67 |
classical monocyte | 1.52e-46 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.52e-46 | 42 |
myeloid leukocyte | 3.43e-44 | 72 |
defensive cell | 1.70e-40 | 48 |
phagocyte | 1.70e-40 | 48 |
mast cell | 1.19e-34 | 5 |
basophil mast progenitor cell | 1.19e-34 | 5 |
monopoietic cell | 5.12e-32 | 59 |
monocyte | 5.12e-32 | 59 |
monoblast | 5.12e-32 | 59 |
promonocyte | 5.12e-32 | 59 |
macrophage dendritic cell progenitor | 6.36e-31 | 61 |
myeloid cell | 7.31e-29 | 108 |
common myeloid progenitor | 7.31e-29 | 108 |
hematopoietic lineage restricted progenitor cell | 8.97e-26 | 120 |
leukocyte | 1.71e-22 | 136 |
endocrine cell | 2.08e-19 | 9 |
hematopoietic oligopotent progenitor cell | 1.17e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.17e-18 | 161 |
hematopoietic stem cell | 8.73e-18 | 168 |
hematopoietic cell | 9.16e-17 | 177 |
nongranular leukocyte | 1.35e-15 | 115 |
mesenchymal cell | 3.98e-07 | 354 |
connective tissue cell | 6.16e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.79e-42 | 76 |
bone element | 1.33e-38 | 82 |
skeletal element | 5.14e-35 | 90 |
immune system | 7.93e-34 | 93 |
hematopoietic system | 5.25e-32 | 98 |
blood island | 5.25e-32 | 98 |
skeletal system | 2.50e-31 | 100 |
hemolymphoid system | 7.31e-29 | 108 |
musculoskeletal system | 3.70e-20 | 167 |
lateral plate mesoderm | 2.57e-14 | 203 |
mesoderm | 1.52e-09 | 315 |
mesoderm-derived structure | 1.52e-09 | 315 |
presumptive mesoderm | 1.52e-09 | 315 |