FFCP PHASE1:Hg19::chr10:134121438..134121485,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:134121438..134121485,-
|short_description=p1@STK32C
|description=CAGE_peak_1_at_STK32C_5end
|association_with_transcript=0bp_to_ENST00000298630,NM_173575,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=282974 | |EntrezGene=282974 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21332 | |HGNC=21332 | ||
|TSSclassifier=strong | |||
|UniProt=Q86UX6 | |UniProt=Q86UX6 | ||
|association_with_transcript=0bp_to_ENST00000298630,NM_173575,uc001lle.1_5end | |||
|cluster_id=chr10:134121438..134121485,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_STK32C_5end | |||
|id=chr10:134121438..134121485,- | |||
|ontology_enrichment_celltype=CL:0000557!5.60e-12!71;CL:0002009!3.45e-10!65;CL:0000839!1.13e-09!70;CL:0002194!1.92e-09!63;CL:0000576!1.92e-09!63;CL:0000040!1.92e-09!63;CL:0000559!1.92e-09!63;CL:0000766!1.69e-08!76;CL:0000763!7.08e-07!112;CL:0000049!7.08e-07!112 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,2.00e-11,67;CL:0002009,1.22e-09,61;CL:0000839,4.07e-09,66;CL:0002194,6.77e-09,59;CL:0000576,6.77e-09,59;CL:0000040,6.77e-09,59;CL:0000559,6.77e-09,59;CL:0000766,4.09e-08,72;CL:0000473,1.59e-07,48;CL:0000234,1.59e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.42e-15!57;UBERON:0005068!2.42e-15!57;UBERON:0006241!2.42e-15!57;UBERON:0007135!2.42e-15!57;UBERON:0001869!3.01e-14!32;UBERON:0001893!3.42e-14!34;UBERON:0002020!6.64e-14!34;UBERON:0003528!6.64e-14!34;UBERON:0002791!1.40e-13!33;UBERON:0003080!2.09e-13!42;UBERON:0001017!2.93e-13!82;UBERON:0002780!3.15e-13!41;UBERON:0001890!3.15e-13!41;UBERON:0006240!3.15e-13!41;UBERON:0002619!4.46e-13!22;UBERON:0002616!1.32e-12!59;UBERON:0001950!5.61e-12!20;UBERON:0005743!1.26e-11!86;UBERON:0000955!1.27e-11!69;UBERON:0006238!1.27e-11!69;UBERON:0000956!1.25e-10!25;UBERON:0000203!1.25e-10!25;UBERON:0001474!8.59e-10!86;UBERON:0000073!1.01e-09!94;UBERON:0001016!1.01e-09!94;UBERON:0003075!1.12e-09!86;UBERON:0007284!1.12e-09!86;UBERON:0002346!3.99e-09!90;UBERON:0002371!4.69e-09!80;UBERON:0004765!5.03e-08!101;UBERON:0001434!5.03e-08!101;UBERON:0003056!2.83e-07!61;UBERON:0002390!9.92e-07!102;UBERON:0003061!9.92e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.24e-13;22!UBERON:0001869;2.64e-13;32!UBERON:0001893;4.80e-13;34!UBERON:0003528;1.17e-12;34!UBERON:0002020;1.17e-12;34!UBERON:0002791;1.17e-12;32!UBERON:0001950;3.00e-12;20!UBERON:0000956;3.17e-11;25!UBERON:0000203;3.17e-11;25!UBERON:0002780;1.45e-10;41!UBERON:0001890;1.45e-10;41!UBERON:0000073;2.51e-09;53!UBERON:0002616;2.51e-09;53!UBERON:0000955;6.61e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.22e-15,56;UBERON:0005068,3.22e-15,56;UBERON:0006241,3.22e-15,56;UBERON:0007135,3.22e-15,56;UBERON:0000073,1.45e-14,53;UBERON:0002616,1.45e-14,53;UBERON:0001869,2.13e-14,32;UBERON:0001893,2.44e-14,34;UBERON:0003528,4.76e-14,34;UBERON:0002020,4.76e-14,34;UBERON:0002791,1.77e-13,32;UBERON:0002780,2.75e-13,41;UBERON:0001890,2.75e-13,41;UBERON:0003080,2.75e-13,41;UBERON:0006240,2.75e-13,41;UBERON:0002619,3.08e-13,22;UBERON:0001017,5.41e-13,81;UBERON:0001950,3.92e-12,20;UBERON:0000955,2.36e-11,68;UBERON:0006238,2.36e-11,68;UBERON:0001016,7.46e-11,89;UBERON:0000956,9.23e-11,25;UBERON:0000203,9.23e-11,25;UBERON:0001474,2.10e-09,82;UBERON:0003075,7.06e-09,82;UBERON:0007284,7.06e-09,82;UBERON:0002371,1.14e-08,76;UBERON:0002346,2.31e-08,86;UBERON:0003056,4.42e-07,61;UBERON:0001434,6.51e-07,100;UBERON:0004765,7.06e-07,90;UBERON:0002405,9.49e-07,93 | |||
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| ||
|short_description=p1@STK32C | |||
}} | }} |
Latest revision as of 03:49, 17 September 2015
Short description: | p1@STK32C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_STK32C_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000298630, NM_173575, uc001lle.1_5end |
EntrezGene: | STK32C |
HGNC: | 21332 |
UniProt: | Q86UX6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 2.00e-11 | 67 |
macrophage dendritic cell progenitor | 1.22e-09 | 61 |
myeloid lineage restricted progenitor cell | 4.07e-09 | 66 |
monopoietic cell | 6.77e-09 | 59 |
monocyte | 6.77e-09 | 59 |
monoblast | 6.77e-09 | 59 |
promonocyte | 6.77e-09 | 59 |
myeloid leukocyte | 4.09e-08 | 72 |
defensive cell | 1.59e-07 | 48 |
phagocyte | 1.59e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
neural tube | 3.22e-15 | 56 |
neural rod | 3.22e-15 | 56 |
future spinal cord | 3.22e-15 | 56 |
neural keel | 3.22e-15 | 56 |
regional part of nervous system | 1.45e-14 | 53 |
regional part of brain | 1.45e-14 | 53 |
cerebral hemisphere | 2.13e-14 | 32 |
telencephalon | 2.44e-14 | 34 |
brain grey matter | 4.76e-14 | 34 |
gray matter | 4.76e-14 | 34 |
regional part of telencephalon | 1.77e-13 | 32 |
regional part of forebrain | 2.75e-13 | 41 |
forebrain | 2.75e-13 | 41 |
anterior neural tube | 2.75e-13 | 41 |
future forebrain | 2.75e-13 | 41 |
regional part of cerebral cortex | 3.08e-13 | 22 |
central nervous system | 5.41e-13 | 81 |
neocortex | 3.92e-12 | 20 |
brain | 2.36e-11 | 68 |
future brain | 2.36e-11 | 68 |
nervous system | 7.46e-11 | 89 |
cerebral cortex | 9.23e-11 | 25 |
pallium | 9.23e-11 | 25 |
bone element | 2.10e-09 | 82 |
neural plate | 7.06e-09 | 82 |
presumptive neural plate | 7.06e-09 | 82 |
bone marrow | 1.14e-08 | 76 |
neurectoderm | 2.31e-08 | 86 |
pre-chordal neural plate | 4.42e-07 | 61 |
skeletal system | 6.51e-07 | 100 |
skeletal element | 7.06e-07 | 90 |
immune system | 9.49e-07 | 93 |