FFCP PHASE1:Hg19::chr10:134121401..134121430,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:134121401..134121430,-
|short_description=p4@STK32C
|description=CAGE_peak_4_at_STK32C_5end
|association_with_transcript=13bp_to_ENST00000298630_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=282974 | |EntrezGene=282974 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21332 | |HGNC=21332 | ||
|TSSclassifier=strong | |||
|UniProt=Q86UX6 | |UniProt=Q86UX6 | ||
|association_with_transcript=13bp_to_ENST00000298630_5end | |||
|cluster_id=chr10:134121401..134121430,- | |||
|description=CAGE_peak_4_at_STK32C_5end | |||
|id=chr10:134121401..134121430,- | |||
|ontology_enrichment_celltype=CL:0000557!1.32e-19!71;CL:0002009!4.57e-19!65;CL:0000839!1.14e-18!70;CL:0002194!3.21e-18!63;CL:0000576!3.21e-18!63;CL:0000040!3.21e-18!63;CL:0000559!3.21e-18!63;CL:0000766!5.07e-16!76;CL:0000860!7.34e-14!45;CL:0000763!1.16e-12!112;CL:0000049!1.16e-12!112;CL:0002057!2.40e-12!42 | |||
|ontology_enrichment_celltype_v019=CL:0000576;2.68e-11;48!CL:0000766;5.04e-10;69!CL:0002393;2.37e-07;6!CL:0002397;2.37e-07;6!CL:0000473;2.90e-07;39!CL:0000234;2.90e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,2.96e-24,67;CL:0000839,3.10e-23,66;CL:0000766,1.35e-22,72;CL:0002009,8.77e-22,61;CL:0002194,2.37e-21,59;CL:0000576,2.37e-21,59;CL:0000040,2.37e-21,59;CL:0000559,2.37e-21,59;CL:0000763,3.61e-18,108;CL:0000049,3.61e-18,108;CL:0000473,1.31e-16,48;CL:0000234,1.31e-16,48;CL:0000860,3.55e-14,42;CL:0002057,3.55e-14,42;CL:0002031,2.69e-11,120;CL:0002393,2.87e-11,9;CL:0002397,2.87e-11,9;CL:0000988,8.69e-11,177;CL:0002032,2.92e-10,161;CL:0000837,2.92e-10,161;CL:0000738,3.90e-10,136;CL:0000037,1.06e-09,168;CL:0002087,3.20e-09,115 | |||
|ontology_enrichment_development_v019=CL:0002057;2.67e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.14e-14!80;UBERON:0001474!2.74e-14!86;UBERON:0002390!1.13e-13!102;UBERON:0003061!1.13e-13!102;UBERON:0004765!1.92e-12!101;UBERON:0001434!1.92e-12!101;UBERON:0002193!4.62e-11!112;UBERON:0002619!6.91e-10!22;UBERON:0001950!7.60e-10!20;UBERON:0002405!3.73e-09!115;UBERON:0000956!4.53e-08!25;UBERON:0000203!4.53e-08!25;UBERON:0000923!3.73e-07!604;UBERON:0005291!3.73e-07!604;UBERON:0006598!3.73e-07!604;UBERON:0002532!3.73e-07!604;UBERON:0001869!3.76e-07!32;UBERON:0002050!5.64e-07!605;UBERON:0005423!5.64e-07!605;UBERON:0003081!5.74e-07!216;UBERON:0001893!7.05e-07!34;UBERON:0002020!7.48e-07!34;UBERON:0003528!7.48e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.03e-09;20!UBERON:0002619;1.72e-08;22!UBERON:0000956;4.95e-07;25!UBERON:0000203;4.95e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.23e-19,76;UBERON:0001474,5.17e-18,82;UBERON:0004765,6.24e-16,90;UBERON:0002405,3.09e-15,93;UBERON:0002390,2.75e-14,98;UBERON:0003061,2.75e-14,98;UBERON:0001434,8.40e-14,100;UBERON:0002193,1.51e-12,108;UBERON:0001950,6.37e-10,20;UBERON:0002619,1.12e-08,22;UBERON:0000956,3.44e-07,25;UBERON:0000203,3.44e-07,25;UBERON:0003081,5.26e-07,203 | |||
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|phase1_expression=0,1.71280419112787,0,0,0.446961094427288,0,2.53299878168311,0.631719873426831,2.08948502559871,0.245733936501509,4.18680700783456,0,0,0,0,0,0,0,0.487932798790507,0.61560529038394,0.204000691244253,0.313454721478088,0,0.273748850145768,0.125542639594803,0,0,0,1.57345710739562,0,2.01260960310899,0.919421224478927,1.50602959389125,0.369754010166788,0,0,0.293600439334847,1.10799081706375,1.80490002723128,1.51907609501096,2.68698569087909,3.56283032620878,2.83333124397605,1.45398238779565,3.02300754951048,3.15359279544161,0.464858073811369,1.23350366406548,1.23882548358041,0.28769239232215,0.512321413058201,1.6553756092201,1.72372840368309,0,2.70852973188684,0.376484679085209,1.36453075028923,1.12361742222542,0.306083892370903,0.962787081228281,1.91801137739712,0.329851300186716,0.997318288108159,2.13112375266347,0.290209238628584,0.56738522469114,3.11411124497787,0.251248665256743,2.60741459210101,1.52032191293582,0.605399502633369,1.84138817993782,0.632924774881769,3.38008458099107,6.37812899895131,4.19317291016752,1.12328631146495,2.4028302854641,0.803627933485401,3.42015292489498,7.16100037916724,6.57590953552682,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0.560508562981536,1.31692042387539,0.393419540227666,0.786021525498329,0.822405995998037,0,0,0.473447805734733,0,0.222820913770347,0,0,0,0.128091319725675,0,0.164437904603676,0,0,0,0.267540828089713,2.09071047609954,0.226618685395132,0,0.34362744548263,0,0,0,0,0.301150238155546,0.383959833463255,0,0,0,1.20964045934839,2.40696176205157,1.59306844271079,0,0,0.383587685530591,0.361439152384566,0.50133791063589,0.434539556882471,0,0.486634870302636,0,0.221729397462564,0.087834785693126,0.654895377488563,0.364295288292542,0,15.9028222890795,18.9801413656201,8.24339355216964,0,0,0,0.198762407366705,1.72046919021225,0,0.56530794192401,0.419499436209906,0.550236083880135,1.04497483268405,0,0.35576626268671,0,0.805658634218294,0,0,1.47065232138347,1.62028389576352,0.267899184852239,0.44905874525234,0.225222960966644,0,0,0.183201743930407,0,0,1.3082821564276,0,0.506522046658319,0.529636723252875,0.573673241497627,0.709336764396714,0,2.1349799145941,1.2333377420858,0,0,0.326923806226917,0.302714855289863,0,0,1.24864030732128,1.1409436430889,1.49448680551801,0.469737994575059,0.485618833104395,0.561803226808994,0.204154171254893,0.245668634623536,0.516628905878827,0,0.989067717114227,0,2.87447256726495,0.168336113954066,0.375355559615893,0.831192346452549,0.438977620880838,0.919463387397059,0.45071417671979,0.567160915800105,0.358779271377724,0.427114777637135,0.211931901159562,0.600182192168805,0.103052529238439,0.515281080091258,0.744467425326359,0,0.0974370051611986,0,0.0920498986422993,0,0.355009592516614,0.10075209822764,0.508681776931463,0.193260853163297,0.272746120590835,0.286804595389004,0.243947412259191,0,0.348581828608555,0.414644220061482,0,0,0,0.643240938192885,0,0,1.44375896333917,0.828147600278907,0.842923450390509,0.482022059766964,1.65440959098591,2.17879444092406,1.18635309555548,1.61797569792197,1.17732879075208,0.769494313892781,1.4763109092493,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0.343135620597051,0,1.1240175325762,0.100528972411631,0,0.651616610620649,1.03993478527958,0,0.115930404975077,0,0.144366447761074,0,0.190254152234598,2.37061319387782,0,0.738651018262192,4.91408956792399,2.37809859661965,0,0.16798212819886,0,0.268675568108545,0.581267877027924,0,0,1.40877494421162,2.48793738648926,3.89123874225796,7.32206113873004,0.444485260045183,0.763976851116555,1.17217447210047,0,0.514137463516618,0.901029173531752,0.571652865261156,0,0,0.22001485746285,0.387815147273333,0,0,0.531876233169741,0,0.257207374262142,0,0,0.714889968290738,0,0.823240336780769,0.65147236858747,0,0.791951872933429,0.301439377059586,0,0.099972991182057,0,2.51128545716063,2.10833939483032,1.19812427745791,1.14861935834114,0,0.579125226670317,1.43833425785268,0,0,1.18218456121156,1.50939302401662,1.54011643535698,1.01637849688985,0,0,0.335032530668698,0,0,0,0,0.12269149171914,0,1.08506009479894,0.623912584592421,0,0.315404830067869,0.234282829985426,0.300946099727719,0,1.03473071292505,0,0.184369168541703,0.260650843404249,0.587403472388222,1.71571711905428,0.206768026122887,1.50999940573032,0.853820462427555,0.303127571446259,0,0,0.248107807818777,0,0,0,0,0.160853921143607,0,0.308419387605311,0.177561725313127,0.164254312027618,0,0.348631135379878,0.846016147141356,0,0.276242966807689,0.574072240823034,0.728364672026868,0.524497659837696,0,0.462092022626489,2.35304930753057,0,0.211103257785751,0,0.340187410553031,0.647747748306418,0,1.08378575017541,1.00337954770971,0.764628819135115,2.49322802678617,1.79099803777743,0.438519753291869,0,0,0,0.325378394664303,0.103041011647722,0.915694648183434,0.247528499761764,0,0.650060246036521,0,0,0.616194468458578,0.307007349452259,0.275673144969061,0.107420244868274,0,0.255679882248303,0.534192213880424,0.826424576804891,0.192190067365106,0.255225424989168,0.910420027699949,0.929691098594572,0.31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| ||
|short_description=p4@STK32C | |||
}} | }} |
Latest revision as of 03:48, 17 September 2015
Short description: | p4@STK32C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_STK32C_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_ENST00000298630_5end |
EntrezGene: | STK32C |
HGNC: | 21332 |
UniProt: | Q86UX6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 2.96e-24 | 67 |
myeloid lineage restricted progenitor cell | 3.10e-23 | 66 |
myeloid leukocyte | 1.35e-22 | 72 |
macrophage dendritic cell progenitor | 8.77e-22 | 61 |
monopoietic cell | 2.37e-21 | 59 |
monocyte | 2.37e-21 | 59 |
monoblast | 2.37e-21 | 59 |
promonocyte | 2.37e-21 | 59 |
myeloid cell | 3.61e-18 | 108 |
common myeloid progenitor | 3.61e-18 | 108 |
defensive cell | 1.31e-16 | 48 |
phagocyte | 1.31e-16 | 48 |
classical monocyte | 3.55e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.55e-14 | 42 |
hematopoietic lineage restricted progenitor cell | 2.69e-11 | 120 |
intermediate monocyte | 2.87e-11 | 9 |
CD14-positive, CD16-positive monocyte | 2.87e-11 | 9 |
hematopoietic cell | 8.69e-11 | 177 |
hematopoietic oligopotent progenitor cell | 2.92e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.92e-10 | 161 |
leukocyte | 3.90e-10 | 136 |
hematopoietic stem cell | 1.06e-09 | 168 |
nongranular leukocyte | 3.20e-09 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.23e-19 | 76 |
bone element | 5.17e-18 | 82 |
skeletal element | 6.24e-16 | 90 |
immune system | 3.09e-15 | 93 |
hematopoietic system | 2.75e-14 | 98 |
blood island | 2.75e-14 | 98 |
skeletal system | 8.40e-14 | 100 |
hemolymphoid system | 1.51e-12 | 108 |
neocortex | 6.37e-10 | 20 |
regional part of cerebral cortex | 1.12e-08 | 22 |
cerebral cortex | 3.44e-07 | 25 |
pallium | 3.44e-07 | 25 |
lateral plate mesoderm | 5.26e-07 | 203 |