FFCP PHASE1:Hg19::chr11:31832461..31832468,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5080 | |EntrezGene=5080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8620 | |HGNC=8620 | ||
|TSSclassifier=strong | |||
|UniProt=P26367 | |UniProt=P26367 | ||
|association_with_transcript=124bp_to_ENST00000379111,uc001mte.3_5end | |association_with_transcript=124bp_to_ENST00000379111,uc001mte.3_5end | ||
|cluster_id=chr11:31832461..31832468,- | |||
|coexpression_cluster_id=C185 | |||
|description=CAGE_peak_20_at_PAX6_5end | |description=CAGE_peak_20_at_PAX6_5end | ||
|id=chr11:31832461..31832468,- | |id=chr11:31832461..31832468,- | ||
|ontology_enrichment_celltype=CL:0000064!1.15e-17!3;CL:0005012!1.15e-17!3;CL:0000067!1.15e-17!3;CL:0002304!1.15e-17!3;CL:0000080!2.52e-09!6 | |ontology_enrichment_celltype=CL:0000064!1.15e-17!3;CL:0005012!1.15e-17!3;CL:0000067!1.15e-17!3;CL:0002304!1.15e-17!3;CL:0000080!2.52e-09!6 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:6193!9.79e-07!1 | |ontology_enrichment_disease=DOID:6193!9.79e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:5409;2.53e-11;4!DOID:1325;5.08e-07;7!DOID:3904;5.08e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,2.53e-11,4;DOID:1325,5.08e-07,7;DOID:3904,5.08e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0001778!1.15e-17!3;UBERON:0001775!1.15e-17!3;UBERON:0003075!3.79e-16!86;UBERON:0007284!3.79e-16!86;UBERON:0002346!2.88e-15!90;UBERON:0000488!2.21e-13!4;UBERON:0007625!1.57e-12!11;UBERON:0003056!5.31e-12!61;UBERON:0000019!4.74e-10!19;UBERON:0000047!4.74e-10!19;UBERON:0004088!4.74e-10!19;UBERON:0003072!4.74e-10!19;UBERON:0003071!4.74e-10!19;UBERON:0004128!4.74e-10!19;UBERON:0001801!8.65e-10!14;UBERON:0000970!1.62e-09!20;UBERON:0002203!4.49e-09!6;UBERON:0001768!4.49e-09!6;UBERON:0002104!4.90e-09!21;UBERON:0001456!4.90e-09!21;UBERON:0001049!5.43e-09!57;UBERON:0005068!5.43e-09!57;UBERON:0006241!5.43e-09!57;UBERON:0007135!5.43e-09!57;UBERON:0000020!3.38e-08!23;UBERON:0000988!4.89e-08!3;UBERON:0001032!7.87e-08!24;UBERON:0004456!7.87e-08!24;UBERON:0005743!1.25e-07!86;UBERON:0000033!1.30e-07!123;UBERON:0000153!4.06e-07!129;UBERON:0007811!4.06e-07!129;UBERON:0002616!5.06e-07!59;UBERON:0001017!8.74e-07!82 | |ontology_enrichment_uberon=UBERON:0001778!1.15e-17!3;UBERON:0001775!1.15e-17!3;UBERON:0003075!3.79e-16!86;UBERON:0007284!3.79e-16!86;UBERON:0002346!2.88e-15!90;UBERON:0000488!2.21e-13!4;UBERON:0007625!1.57e-12!11;UBERON:0003056!5.31e-12!61;UBERON:0000019!4.74e-10!19;UBERON:0000047!4.74e-10!19;UBERON:0004088!4.74e-10!19;UBERON:0003072!4.74e-10!19;UBERON:0003071!4.74e-10!19;UBERON:0004128!4.74e-10!19;UBERON:0001801!8.65e-10!14;UBERON:0000970!1.62e-09!20;UBERON:0002203!4.49e-09!6;UBERON:0001768!4.49e-09!6;UBERON:0002104!4.90e-09!21;UBERON:0001456!4.90e-09!21;UBERON:0001049!5.43e-09!57;UBERON:0005068!5.43e-09!57;UBERON:0006241!5.43e-09!57;UBERON:0007135!5.43e-09!57;UBERON:0000020!3.38e-08!23;UBERON:0000988!4.89e-08!3;UBERON:0001032!7.87e-08!24;UBERON:0004456!7.87e-08!24;UBERON:0005743!1.25e-07!86;UBERON:0000033!1.30e-07!123;UBERON:0000153!4.06e-07!129;UBERON:0007811!4.06e-07!129;UBERON:0002616!5.06e-07!59;UBERON:0001017!8.74e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;4.37e-36;10!UBERON:0000178;2.09e-24;15!UBERON:0000179;2.09e-24;15!UBERON:0000463;2.09e-24;15!UBERON:0000478;1.31e-15;24!UBERON:0002390;5.06e-12;32!UBERON:0000945;2.97e-09;5!UBERON:0010039;2.97e-09;5!UBERON:0000922;6.63e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,4.37e-36,10;UBERON:0000358,4.37e-36,10;UBERON:0000307,4.37e-36,10;UBERON:0000091,4.37e-36,10;UBERON:0000087,4.37e-36,10;UBERON:0007010,4.37e-36,10;UBERON:0007806,4.37e-36,10;UBERON:0008780,4.37e-36,10;UBERON:0005728,4.37e-36,10;UBERON:0000178,2.09e-24,15;UBERON:0000179,2.09e-24,15;UBERON:0000463,2.09e-24,15;UBERON:0000478,1.31e-15,24 | |||
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|short_description=p20@PAX6 | |short_description=p20@PAX6 | ||
}} | }} |
Latest revision as of 14:55, 17 September 2015
Short description: | p20@PAX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_PAX6_5end |
Coexpression cluster: | C185_small_adrenal_gastric_Mesenchymal_acute_HES3GFP_testis |
Association with transcript: | 124bp_to_ENST00000379111, uc001mte.3_5end |
EntrezGene: | PAX6 |
HGNC: | 8620 |
UniProt: | P26367 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
umbilical cord | 4.37e-36 | 10 |
blastocyst | 4.37e-36 | 10 |
blastula | 4.37e-36 | 10 |
bilaminar disc | 4.37e-36 | 10 |
inner cell mass | 4.37e-36 | 10 |
cleaving embryo | 4.37e-36 | 10 |
connecting stalk | 4.37e-36 | 10 |
inner cell mass derived epiblast | 4.37e-36 | 10 |
extraembryonic mesoderm | 4.37e-36 | 10 |
blood | 2.09e-24 | 15 |
haemolymphatic fluid | 2.09e-24 | 15 |
organism substance | 2.09e-24 | 15 |
extraembryonic structure | 1.31e-15 | 24 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 2.53e-11 | 4 |
bronchus cancer | 5.08e-07 | 7 |
bronchogenic carcinoma | 5.08e-07 | 7 |