FFCP PHASE1:Hg19::chr15:93426247..93426278,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1106 | |EntrezGene=1106 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1917 | |HGNC=1917 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=2bp_to_ENST00000557147_5end | |association_with_transcript=2bp_to_ENST00000557147_5end | ||
|cluster_id=chr15:93426247..93426278,+ | |||
|description=CAGE_peak_13_at_CHD2_5end | |description=CAGE_peak_13_at_CHD2_5end | ||
|id=chr15:93426247..93426278,+ | |id=chr15:93426247..93426278,+ | ||
|ontology_enrichment_celltype=CL:0000738!4.41e-20!140;CL:0000860!1.11e-16!45;CL:0002057!2.54e-16!42;CL:0000766!3.37e-16!76;CL:0002031!9.10e-16!124;CL:0000037!2.51e-14!172;CL:0000566!2.51e-14!172;CL:0000839!7.18e-14!70;CL:0002087!1.19e-13!119;CL:0000557!1.42e-13!71;CL:0000988!8.25e-13!182;CL:0002009!8.48e-13!65;CL:0002032!1.12e-12!165;CL:0000837!1.12e-12!165;CL:0002194!5.60e-12!63;CL:0000576!5.60e-12!63;CL:0000040!5.60e-12!63;CL:0000559!5.60e-12!63;CL:0000763!2.38e-10!112;CL:0000049!2.38e-10!112 | |ontology_enrichment_celltype=CL:0000738!4.41e-20!140;CL:0000860!1.11e-16!45;CL:0002057!2.54e-16!42;CL:0000766!3.37e-16!76;CL:0002031!9.10e-16!124;CL:0000037!2.51e-14!172;CL:0000566!2.51e-14!172;CL:0000839!7.18e-14!70;CL:0002087!1.19e-13!119;CL:0000557!1.42e-13!71;CL:0000988!8.25e-13!182;CL:0002009!8.48e-13!65;CL:0002032!1.12e-12!165;CL:0000837!1.12e-12!165;CL:0002194!5.60e-12!63;CL:0000576!5.60e-12!63;CL:0000040!5.60e-12!63;CL:0000559!5.60e-12!63;CL:0000763!2.38e-10!112;CL:0000049!2.38e-10!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.22e-20;33!CL:0002057;1.22e-20;33!CL:0000473;7.04e-17;39!CL:0000234;7.04e-17;39!CL:0000766;5.46e-13;69!CL:0000576;1.38e-10;48!CL:0000094;8.44e-10;8!CL:0000775;9.74e-08;3!CL:0002087;3.06e-07;104!CL:0000081;6.92e-07;11!CL:0000738;7.50e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.18e-27,136;CL:0000766,6.47e-25,72;CL:0000860,1.19e-22,42;CL:0002057,1.19e-22,42;CL:0000473,1.26e-20,48;CL:0000234,1.26e-20,48;CL:0002031,1.73e-20,120;CL:0000037,3.95e-20,168;CL:0000839,1.27e-18,66;CL:0000557,1.79e-18,67;CL:0000988,2.12e-18,177;CL:0002032,2.14e-18,161;CL:0000837,2.14e-18,161;CL:0002087,1.32e-16,115;CL:0002009,6.43e-16,61;CL:0000763,1.18e-15,108;CL:0000049,1.18e-15,108;CL:0002194,4.27e-15,59;CL:0000576,4.27e-15,59;CL:0000040,4.27e-15,59;CL:0000559,4.27e-15,59;CL:0000094,4.13e-10,8;CL:0000775,8.86e-08,3;CL:0000134,1.29e-07,354;CL:0002320,3.39e-07,361;CL:0000081,4.20e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.94e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.23e-14!102;UBERON:0003061!7.23e-14!102;UBERON:0002371!1.68e-12!80;UBERON:0002193!1.72e-11!112;UBERON:0001474!7.92e-11!86;UBERON:0004765!1.09e-08!101;UBERON:0001434!1.09e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.54e-18,98;UBERON:0003061,5.54e-18,98;UBERON:0002371,8.41e-17,76;UBERON:0002193,2.03e-15,108;UBERON:0001474,5.55e-15,82;UBERON:0002405,2.72e-13,93;UBERON:0004765,6.02e-13,90;UBERON:0001434,7.01e-11,100;UBERON:0003081,3.20e-07,203;UBERON:0002384,3.90e-07,371 | |||
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|phase1_expression=0.908391896352783,0,0.845726424575827,0,0.446961094427288,0,2.53299878168311,0,0.261185628199839,0,0.697801167972428,0.218441372130172,0.263766978228454,0.123766352960047,0,0,0,1.46062018077475,0.487932798790507,0.246242116153576,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0,0.246301768349837,0.236132343941038,0.786728553697808,1.53531759238885,1.54816123316076,0,0.30120591877825,0,0.0774672005803016,0.142169232487422,0.587200878669695,1.10799081706375,1.00272223735071,1.08505435357926,0.223915474239924,0.32389366601898,0.257575567634187,1.45398238779565,2.64513160582167,0.970336244751265,1.39457422143411,1.6446715520873,1.54853185447552,1.43846196161075,1.5369642391746,1.6553756092201,1.72372840368309,1.29096936716765,0,1.88242339542605,0.545812300115692,2.02251136000576,1.22433556948361,0.962787081228281,3.19668562899521,1.31940520074686,1.19678194572979,1.27867425159808,1.16083695451434,0.56738522469114,1.24564449799115,0.75374599577023,0,0.868755378820466,0.605399502633369,0.736555271975129,1.58231193720442,0.845021145247767,0.637812899895131,0.419317291016752,0.673971786878971,0.750884464207532,1.12507910687956,0.570025487482497,0.79566670879636,0.182664153764634,1.75996244461323,1.09227722252426,0,0.853460445133014,0,1.14950487990897,0.661044872784862,0.954053754535364,2.27685187643779,1.17447437874188,1.14681968437569,2.64342657158052,0.560508562981536,0,0.983548850569165,2.35806457649499,0.822405995998037,0.334372990781356,0.32592226663359,0.473447805734733,0,0.779873198196215,1.47302953737419,0.664601683750863,0.541607727530031,0.512365278902701,0.390178042679635,0,0.829050053357545,0.869409257205157,0.444859689486181,0.267540828089713,0,0.226618685395132,1.14966148080576,0.34362744548263,0.506039384039006,0.318565414324097,1.30216690771284,0.950452044448374,0.150575119077773,0.127986611154418,1.24930726552346,0.236777252044017,1.64225599384209,0,0.534880391567015,0,0,1.34140171940727,0,0,0.50133791063589,0.434539556882471,0,0.973269740605272,0.0945348171640679,0.221729397462564,0.175669571386252,2.48860243445654,0,0,0,0,0.930705723632056,0.953962497221368,1.14398982156026,2.22874500797739,0.39752481473341,0,0.347140501607594,0.56530794192401,0,0,0,0,0,0.33472061276467,0,0,0.24406205754817,0.367663080345869,0,0.17859945656816,0,0.225222960966644,0,0,0.366403487860815,3.9534125230819,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0.286836620748814,0.354668382198357,0.560677600142307,0,0.98667019366864,0.311211035399766,0.134710672069688,0.163461903113459,0.454072282934794,1.15235184896,0,0.312160076830321,0,0,0,0.161872944368132,0,0,0,0.103325781175765,0,0.494533858557114,0.910161361938026,0,0.168336113954066,0,0.277064115484183,0,0,0.600952235626387,0.113432183160021,0,0,0,0.600182192168805,0.206105058476878,0,0.37223371266318,0,0.194874010322397,0,0.184099797284599,0.161646056818812,0,0.403008392910561,0,0.386521706326594,0,0,0.243947412259191,0.132529768321485,0.232387885739037,0.10366105501537,0,0.36497735907583,0,0.643240938192885,0,0,0,0.473227200159376,0.842923450390509,1.20505514941741,1.21323370005633,0.653638332277218,0.949082476444386,0.404493924480493,0.98110732562673,0.769494313892781,0,0,0,0,0,0,0,0.441463099414651,0.245976877086227,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0.469634776943287,0.433099343283221,0,0,0,1.71697232418975,0,0.936017060556951,0.297262324577456,0,0,0.283550194484773,0,0,0.383382679165211,0.492663237895943,0.088048434013226,2.07328115540772,2.01767934783746,2.65109110195398,0.126995788584338,0.381988425558278,1.17217447210047,0,0.102827492703324,0,0,0.112131084345361,0,0.07333828582095,0.517086863031111,0,0.845302752556,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0.602878754119172,2.61460037580088,0.299918973546171,0,1.00451418286425,0,0.479249710983165,0,0,0.434343920002738,0.410952645100767,0.358121926479791,0.224170287987055,0.788123040807709,0.862510299438069,1.28343036279748,0.254094624222463,0,0,0.167516265334349,1.91381625495949,3.74503511973591,2.99161459204025,1.24324654030811,0,0,0.271265023699736,0.831883446123229,0.892144943985809,0.473107245101804,0.585707074963566,0,0,0,0.664225598535437,0,0.0868836144680828,0,0,0.413536052245775,1.07857100409308,0.426910231213777,0.606255142892519,1.66435439510497,0,0.744323423456331,0.153461973288062,0.280660094433074,1.02511319404561,2.04682899626681,0.482561763430822,1.48418066444991,0.154209693802656,0.177561725313127,0.0821271560138091,0.519254429183621,0.348631135379878,0.120859449591622,0.200506470303285,0.0920809889358963,0.114814448164607,0.182091168006717,0.524497659837696,0,0.0770153371044148,0,0,0,0,0.170093705276516,0.215915916102139,1.54227252690289,0.270946437543853,0,0,0,0.223874754722178,0.438519753291869,1.0457418040996,0,0.328014645699706,0,0.309123034943167,0.0915694648183434,0.082509499920588,0,0,0,0.193341436584244,0.154048617114644,0,0.137836572484531,0.107420244868274,0.145016693914229,0.0852266274161009,0.356128142586949,0.165284915360978,0,0,0.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| ||
|short_description=p13@CHD2 | |short_description=p13@CHD2 | ||
}} | }} |
Latest revision as of 23:11, 19 September 2015
Short description: | p13@CHD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_CHD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 2bp_to_ENST00000557147_5end |
EntrezGene: | CHD2 |
HGNC: | 1917 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 6.18e-27 | 136 |
myeloid leukocyte | 6.47e-25 | 72 |
classical monocyte | 1.19e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.19e-22 | 42 |
defensive cell | 1.26e-20 | 48 |
phagocyte | 1.26e-20 | 48 |
hematopoietic lineage restricted progenitor cell | 1.73e-20 | 120 |
hematopoietic stem cell | 3.95e-20 | 168 |
myeloid lineage restricted progenitor cell | 1.27e-18 | 66 |
granulocyte monocyte progenitor cell | 1.79e-18 | 67 |
hematopoietic cell | 2.12e-18 | 177 |
hematopoietic oligopotent progenitor cell | 2.14e-18 | 161 |
hematopoietic multipotent progenitor cell | 2.14e-18 | 161 |
nongranular leukocyte | 1.32e-16 | 115 |
macrophage dendritic cell progenitor | 6.43e-16 | 61 |
myeloid cell | 1.18e-15 | 108 |
common myeloid progenitor | 1.18e-15 | 108 |
monopoietic cell | 4.27e-15 | 59 |
monocyte | 4.27e-15 | 59 |
monoblast | 4.27e-15 | 59 |
promonocyte | 4.27e-15 | 59 |
granulocyte | 4.13e-10 | 8 |
neutrophil | 8.86e-08 | 3 |
mesenchymal cell | 1.29e-07 | 354 |
connective tissue cell | 3.39e-07 | 361 |
blood cell | 4.20e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.54e-18 | 98 |
blood island | 5.54e-18 | 98 |
bone marrow | 8.41e-17 | 76 |
hemolymphoid system | 2.03e-15 | 108 |
bone element | 5.55e-15 | 82 |
immune system | 2.72e-13 | 93 |
skeletal element | 6.02e-13 | 90 |
skeletal system | 7.01e-11 | 100 |
lateral plate mesoderm | 3.20e-07 | 203 |
connective tissue | 3.90e-07 | 371 |