FFCP PHASE1:Hg19::chr11:19619663..19619674,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:19619663..19619674,+ | |||
|description=CAGE_peak_at_chr11:19619663..19619674,+ | |description=CAGE_peak_at_chr11:19619663..19619674,+ | ||
|id=chr11:19619663..19619674,+ | |id=chr11:19619663..19619674,+ | ||
|ontology_enrichment_celltype=CL:0002150!2.01e-08!3;CL:0000861!2.01e-08!3;CL:0000680!7.94e-08!57;CL:0000056!7.94e-08!57;CL:0000355!7.94e-08!57;CL:0000222!9.87e-08!119;CL:0000515!1.28e-07!4;CL:0002594!2.30e-07!4 | |ontology_enrichment_celltype=CL:0002150!2.01e-08!3;CL:0000861!2.01e-08!3;CL:0000680!7.94e-08!57;CL:0000056!7.94e-08!57;CL:0000355!7.94e-08!57;CL:0000222!9.87e-08!119;CL:0000515!1.28e-07!4;CL:0002594!2.30e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000515;4.66e-34;3!CL:0000222;3.15e-26;1!CL:0000056;7.64e-26;4!CL:0002321;1.15e-15;15!CL:0000680;3.06e-15;7!CL:0002586;1.41e-09;3!CL:0000149;1.69e-07;4!CL:0002594;1.98e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,8.66e-26,4;CL:0002586,1.41e-09,3;CL:0000149,1.69e-07,4;CL:0002594,2.04e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000515;7.64e-26;4!UBERON:0006965;7.78e-14;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!1.22e-07!9;UBERON:0001310!2.30e-07!4;UBERON:0001134!4.31e-07!61;UBERON:0002036!4.31e-07!61;UBERON:0003082!4.31e-07!61;UBERON:0000914!6.18e-07!83;UBERON:0002329!6.18e-07!83;UBERON:0003077!6.18e-07!83;UBERON:0003059!6.18e-07!83;UBERON:0007282!6.18e-07!83;UBERON:0009618!6.18e-07!83;UBERON:0007285!6.18e-07!83;UBERON:0000481!7.21e-07!347;UBERON:0002385!9.21e-07!63;UBERON:0001015!9.21e-07!63;UBERON:0000383!9.21e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0001781;1.41e-09;3!UBERON:0001782;1.41e-09;3!UBERON:0001310;1.98e-07;4!UBERON:0001134;3.34e-07;16!UBERON:0002036;3.34e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,1.41e-09,3;UBERON:0005424,1.41e-09,3;UBERON:0001781,1.69e-07,4;UBERON:0001310,2.04e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0.841680569770331,0.875829639103749,1.93944880838928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.168584690078102,0,0,0,0,0.134831308160164,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579652024875384,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,2.26023954805422,7.16243852959582,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.36807447515742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,2.29610251989794,0,0,0,0,0,0,0,0,0.154048617114644,0,0.551346289938122,0,0,0.170453254832202,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0.949138274156178,0,0,0,0,0,0,0,0,0,0,0,0.975267478179181,0,0,0,0,0,0,0,0.438450885253763,0,0,0.405820753925408,0.30982349809975,0,0,0,1.426684205925,0,0,0,0.75894634753143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.58646378851925,0,0,0.715880777515084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0.17472666824203,0,0.19351266257817,0.146178634172371,0.0821154570532092,0,0,0.90392296312213,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0.600420288709789,0,0,0.859530882839914,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80019435264208,0,0,3.78554694685953,0,0,0,0,0,0.244736704506468,0,0,0,0,0.192914038270915,0,0,0.690860683462397,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0.714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0.841680569770331,0.875829639103749,1.93944880838928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.168584690078102,0,0,0,0,0.134831308160164,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579652024875384,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,2.26023954805422,7.16243852959582,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.36807447515742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,2.29610251989794,0,0,0,0,0,0,0,0,0.154048617114644,0,0.551346289938122,0,0,0.170453254832202,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0.949138274156178,0,0,0,0,0,0,0,0,0,0,0,0.975267478179181,0,0,0,0,0,0,0,0.438450885253763,0,0,0.405820753925408,0.30982349809975,0,0,0,1.426684205925,0,0,0,0.75894634753143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.58646378851925,0,0,0.715880777515084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0.17472666824203,0,0.19351266257817,0.146178634172371,0.0821154570532092,0,0,0.90392296312213,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0.600420288709789,0,0,0.859530882839914,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80019435264208,0,0,3.78554694685953,0,0,0,0,0,0.244736704506468,0,0,0,0,0.192914038270915,0,0,0.690860683462397,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0.714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:19619663..19619674,+ | |short_description=p@chr11:19619663..19619674,+ | ||
}} | }} |
Latest revision as of 20:50, 23 July 2015
Short description: | p@chr11:19619663..19619674, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:19619663..19619674, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 8.66e-26 | 4 |
retinal pigment epithelial cell | 1.41e-09 | 3 |
visual pigment cell | 1.69e-07 | 4 |
smooth muscle cell of the umbilical artery | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 1.41e-09 | 3 |
presumptive retinal pigmented epithelium | 1.41e-09 | 3 |
layer of retina | 1.69e-07 | 4 |
umbilical artery | 2.04e-07 | 4 |