FFCP PHASE1:Hg19::chr10:125853200..125853208,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:125853200..125853208,-
|short_description=p6@CHST15
|description=CAGE_peak_6_at_CHST15_5end
|association_with_transcript=0bp_to_ENST00000421115,uc001lhn.2...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51363 | |EntrezGene=51363 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18137 | |HGNC=18137 | ||
|TSSclassifier=strong | |||
|UniProt=Q7LFX5 | |UniProt=Q7LFX5 | ||
|association_with_transcript=0bp_to_ENST00000421115,uc001lhn.2,uc001lho.2_5end | |||
|cluster_id=chr10:125853200..125853208,- | |||
|description=CAGE_peak_6_at_CHST15_5end | |||
|id=chr10:125853200..125853208,- | |||
|ontology_enrichment_celltype=CL:0002057!5.07e-22!42;CL:0000860!1.09e-19!45;CL:0000766!4.53e-19!76;CL:0002194!2.82e-16!63;CL:0000576!2.82e-16!63;CL:0000040!2.82e-16!63;CL:0000559!2.82e-16!63;CL:0002009!4.49e-15!65;CL:0000839!2.07e-13!70;CL:0000557!6.49e-13!71;CL:0000738!3.34e-08!140;CL:0002087!1.83e-07!119;CL:0002393!2.61e-07!9;CL:0002397!2.61e-07!9;CL:0000094!4.94e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.85e-23;33!CL:0002057;1.85e-23;33!CL:0000473;6.89e-20;39!CL:0000234;6.89e-20;39!CL:0000576;6.98e-20;48!CL:0000766;9.75e-19;69!CL:0000094;9.34e-17;8!CL:0002393;2.04e-12;6!CL:0002397;2.04e-12;6!CL:0000081;1.04e-11;11!CL:0000775;4.06e-08;3!CL:0000763;6.19e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.43e-39,42;CL:0002057,3.43e-39,42;CL:0000473,2.55e-38,48;CL:0000234,2.55e-38,48;CL:0000766,5.15e-37,72;CL:0002194,1.36e-28,59;CL:0000576,1.36e-28,59;CL:0000040,1.36e-28,59;CL:0000559,1.36e-28,59;CL:0002009,2.42e-27,61;CL:0000839,1.49e-24,66;CL:0000557,4.81e-24,67;CL:0000763,1.04e-20,108;CL:0000049,1.04e-20,108;CL:0000738,4.11e-19,136;CL:0002393,3.71e-17,9;CL:0002397,3.71e-17,9;CL:0000094,2.07e-16,8;CL:0002087,6.89e-14,115;CL:0002032,2.12e-13,161;CL:0000837,2.12e-13,161;CL:0000037,4.11e-13,168;CL:0002031,6.71e-13,120;CL:0000988,7.68e-12,177;CL:0000081,1.81e-11,11;CL:0000775,4.14e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;4.82e-29;42!CL:0000049;2.94e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.77e-17!112;UBERON:0002390!4.18e-15!102;UBERON:0003061!4.18e-15!102;UBERON:0002405!1.65e-13!115;UBERON:0002371!4.76e-11!80;UBERON:0007023!6.75e-11!115;UBERON:0000922!2.28e-10!612;UBERON:0001474!1.37e-09!86;UBERON:0000480!1.47e-09!626;UBERON:0000468!2.11e-09!659;UBERON:0004765!2.58e-09!101;UBERON:0001434!2.58e-09!101;UBERON:0000467!2.89e-09!625;UBERON:0002050!8.08e-09!605;UBERON:0005423!8.08e-09!605;UBERON:0000923!1.43e-08!604;UBERON:0005291!1.43e-08!604;UBERON:0006598!1.43e-08!604;UBERON:0002532!1.43e-08!604 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.88e-30,108;UBERON:0002405,3.67e-25,93;UBERON:0002390,5.25e-25,98;UBERON:0003061,5.25e-25,98;UBERON:0002371,4.40e-20,76;UBERON:0001474,2.75e-19,82;UBERON:0004765,5.31e-18,90;UBERON:0001434,1.61e-17,100;UBERON:0003081,9.73e-12,203;UBERON:0002204,9.80e-07,167 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0.61560529038394,0,0.313454721478088,0.85870796139317,0.136874425072884,0.251085279189606,0,0,0,1.18009283054671,1.15148819429164,1.08371286321253,0,0,0.739508020333575,0,0,0,1.66198622559563,3.40925560699241,1.51907609501096,0.447830948479849,0.971680998056939,0,1.59938062657521,1.51150377475524,0.970336244751265,2.09186133215116,1.6446715520873,1.85823822537062,2.3015391385772,0.512321413058201,1.18241114944293,4.82643953031266,1.93645405075148,4.06279459783025,2.82363509313907,0.545812300115692,0.449446968890169,2.14258724659632,1.60464513538047,1.27867425159808,0,0.797854630486527,0.426224750532694,2.03146467040009,2.26954089876456,0,2.26123798731069,1.0429658368404,1.08594422352558,3.63239701580021,0.736555271975129,0.949387162322653,2.11255286311942,2.12604299965044,2.72556239160889,2.13424399178341,0.901061357049038,2.4108838004562,1.42506371870624,1.19350006319454,1.46131323011707,0,0.546138611262131,0,0.426730222566507,0.800791974072025,1.72425731986345,0.661044872784862,0.954053754535364,1.70763890732835,0.587237189370939,1.52909291250092,0,0,0.263384084775077,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0.361439152384566,0,0.434539556882471,0,0,0.189069634328136,0.221729397462564,0.175669571386252,0.458426764241994,0,0,0,0,0.26591592103773,0.953962497221368,0,1.11437250398869,0.79504962946682,1.72046919021225,2.08284300964557,0.56530794192401,0,0,0.626984899610432,1.8089173141853,1.42306505074684,3.68192674041137,3.62546385398232,0.760272105718513,2.19655851793353,0,0.81014194788176,0.625098097988558,0.22452937262617,0.225222960966644,0,1.89853131913626,0.549605231791222,5.27121669744253,3.87780264148325,0,0,0,0,0,0.354668382198357,0,0,0.24666754841716,0,0.808264032418128,0.163461903113459,2.27036141467397,1.15235184896,0,0,0,0,0,0,0,0.204154171254893,0,0.206651562351531,0,0.494533858557114,0,0,0,0.125118519871964,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0.193260853163297,0.272746120590835,0.860413786167011,0.365921118388786,0.662648841607426,0.813357600086629,0.414644220061482,0.504641701751257,0.36497735907583,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,4.20725321410337,0,0,0,0.982827216677626,0.590789906681404,0,0.245976877086227,0.171567810298526,0.219500570817251,0,0.100528972411631,0.0925884451585296,0.325808305310325,0,0,0.231860809950154,0.469634776943287,1.01056513432752,0.925971025153221,0.190254152234598,0.790204397959275,0,0.492434012174795,0.468008530278475,0.743155811443641,0,1.6798212819886,0.283550194484773,0,0,1.53353071666084,0,0.176096868026452,0.207328115540772,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0.355391948742546,0,0,0,0.299918973546171,2.43247561282381,0,2.10833939483032,0,0,0,0.144781306667579,0.205476322550383,0.537182889719687,0,0.197030760201927,0,0.128343036279748,0.254094624222463,0,0,0.335032530668698,0.637938751653163,7.49007023947182,8.97484377612075,7.45947924184864,0.12269149171914,0,0.542530047399471,0,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.979005787313703,0.686286847621712,0.620304078368662,0.862856803274467,0.853820462427555,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0.604297247958111,0,0.184161977871793,0.229628896329213,0,0.131124414959424,0,0.231046011313244,0,0,0.422206515571503,2.27466768141793,0.680374821106063,0,0,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0.976135183992909,0.206082023295445,0,0,0,0,0,0.48335359146061,0,0,0.137836572484531,0,0,0.340906509664404,0.445160178233687,0,0,0.127612712494584,0.30347334256665,0,0,0,0,0,0,0,0,0,0.632758849437452,0.190630193923825,0.255897791311334,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0.211107635297664,1.64647446479951,0.75894634753143,0,0.192444225451024,0,0,0.376575203107117,0.43050537267123,0,0.443430153536676,0,1.01489521846434,0.764637207142375,1.13929437434833,0.714695326373367,1.64544909234478,2.59389324477087,3.24018862342869,2.37937552888281,0,0.962479855263359,0,0.371606350251437,0.28853842595289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0.66866030566487,0.284136146806413,0,0.296964680832639,0,0,0.422008249231538,0.333926115068718,0,0,0.19924798825107,1.10513566212459,0,0,0,0,0.449341755736634,0.179021174675609,0,0.493217028184668,2.3948309234694,0,0,0.556608588971108,3.99227596002388,0,0.349839999984783,0,0.1137934482855,0.508507300585533,0.236387681767936,0,0,0,0,0.361789315876224,0,0.110579259931225,0.295547618953547,0.658156191461918,0,0.278847488557207,0.153900517007594,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0.163232808159148,0.706765357169704,0,0,0.796118080530053,1.22206028986725,0,0.12356393894650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| ||
|short_description=p6@CHST15 | |||
}} | }} |
Latest revision as of 21:50, 16 September 2015
Short description: | p6@CHST15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CHST15_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000421115, uc001lhn.2, uc001lho.2_5end |
EntrezGene: | CHST15 |
HGNC: | 18137 |
UniProt: | Q7LFX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.43e-39 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.43e-39 | 42 |
defensive cell | 2.55e-38 | 48 |
phagocyte | 2.55e-38 | 48 |
myeloid leukocyte | 5.15e-37 | 72 |
monopoietic cell | 1.36e-28 | 59 |
monocyte | 1.36e-28 | 59 |
monoblast | 1.36e-28 | 59 |
promonocyte | 1.36e-28 | 59 |
macrophage dendritic cell progenitor | 2.42e-27 | 61 |
myeloid lineage restricted progenitor cell | 1.49e-24 | 66 |
granulocyte monocyte progenitor cell | 4.81e-24 | 67 |
myeloid cell | 1.04e-20 | 108 |
common myeloid progenitor | 1.04e-20 | 108 |
leukocyte | 4.11e-19 | 136 |
intermediate monocyte | 3.71e-17 | 9 |
CD14-positive, CD16-positive monocyte | 3.71e-17 | 9 |
granulocyte | 2.07e-16 | 8 |
nongranular leukocyte | 6.89e-14 | 115 |
hematopoietic oligopotent progenitor cell | 2.12e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.12e-13 | 161 |
hematopoietic stem cell | 4.11e-13 | 168 |
hematopoietic lineage restricted progenitor cell | 6.71e-13 | 120 |
hematopoietic cell | 7.68e-12 | 177 |
blood cell | 1.81e-11 | 11 |
neutrophil | 4.14e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.88e-30 | 108 |
immune system | 3.67e-25 | 93 |
hematopoietic system | 5.25e-25 | 98 |
blood island | 5.25e-25 | 98 |
bone marrow | 4.40e-20 | 76 |
bone element | 2.75e-19 | 82 |
skeletal element | 5.31e-18 | 90 |
skeletal system | 1.61e-17 | 100 |
lateral plate mesoderm | 9.73e-12 | 203 |
musculoskeletal system | 9.80e-07 | 167 |