FFCP PHASE1:Hg19::chr11:1889880..1889892,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4046 | |EntrezGene=4046 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6707 | |HGNC=6707 | ||
|TSSclassifier=strong | |||
|UniProt=E9PBV6,P33241 | |UniProt=E9PBV6,P33241 | ||
|association_with_transcript=-10bp_to_ENST00000405957,NM_001013253,uc001luk.2_5end | |association_with_transcript=-10bp_to_ENST00000405957,NM_001013253,uc001luk.2_5end | ||
|cluster_id=chr11:1889880..1889892,+ | |||
|coexpression_cluster_id=C2118 | |||
|description=CAGE_peak_14_at_LSP1_5end | |description=CAGE_peak_14_at_LSP1_5end | ||
|id=chr11:1889880..1889892,+ | |id=chr11:1889880..1889892,+ | ||
|ontology_enrichment_celltype=CL:0000153!1.68e-11!9;CL:0000447!1.68e-11!9;CL:0000327!3.84e-11!14;CL:0000188!4.97e-10!9;CL:0000667!3.52e-09!6;CL:0000058!3.52e-09!6;CL:0000138!3.52e-09!6;CL:0000499!3.69e-09!27;CL:0000135!6.79e-08!3;CL:0000386!6.79e-08!3;CL:0000388!6.79e-08!3 | |ontology_enrichment_celltype=CL:0000153!1.68e-11!9;CL:0000447!1.68e-11!9;CL:0000327!3.84e-11!14;CL:0000188!4.97e-10!9;CL:0000667!3.52e-09!6;CL:0000058!3.52e-09!6;CL:0000138!3.52e-09!6;CL:0000499!3.69e-09!27;CL:0000135!6.79e-08!3;CL:0000386!6.79e-08!3;CL:0000388!6.79e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000153;6.57e-26;9!CL:0000447;6.57e-26;9!CL:0000138;4.32e-20;6!CL:0000327;1.34e-19;15!CL:0000499;3.18e-19;28!CL:0000135;2.82e-16;3!CL:0000388;2.82e-16;3!CL:0000214;1.00e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,9.80e-26,9;CL:0000447,9.80e-26,9;CL:0000058,7.73e-20,6;CL:0000138,7.73e-20,6;CL:0000327,1.56e-19,15;CL:0000499,3.50e-19,28;CL:0000135,2.69e-16,3;CL:0000388,2.69e-16,3;CL:0000214,8.80e-08,3;CL:0000151,2.07e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.68e-15!115;UBERON:0000043!6.79e-08!3;UBERON:0003978!4.42e-07!3;UBERON:0009751!4.42e-07!3;UBERON:0000946!4.42e-07!3;UBERON:0002523!4.42e-07!3;UBERON:0005983!4.42e-07!3;UBERON:0002165!4.42e-07!3;UBERON:0002062!4.42e-07!3;UBERON:0007280!4.42e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!4.68e-15!115;UBERON:0000043!6.79e-08!3;UBERON:0003978!4.42e-07!3;UBERON:0009751!4.42e-07!3;UBERON:0000946!4.42e-07!3;UBERON:0002523!4.42e-07!3;UBERON:0005983!4.42e-07!3;UBERON:0002165!4.42e-07!3;UBERON:0002062!4.42e-07!3;UBERON:0007280!4.42e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;2.82e-16;3!UBERON:0000043;2.82e-16;3!UBERON:0007845;2.82e-16;3!UBERON:0006915;1.00e-07;3!UBERON:0007616;1.00e-07;3!UBERON:0002217;1.00e-07;3!UBERON:0002018;1.00e-07;3!UBERON:0001723;2.02e-07;3!UBERON:0001033;2.02e-07;3!UBERON:0001134;3.10e-07;16!UBERON:0002036;3.10e-07;16!UBERON:0003978;4.00e-07;3!UBERON:0000946;4.00e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,2.69e-16,3;UBERON:0000043,2.69e-16,3;UBERON:0007845,2.69e-16,3;UBERON:0006915,8.80e-08,3;UBERON:0007616,8.80e-08,3;UBERON:0002217,8.80e-08,3;UBERON:0002018,8.80e-08,3;UBERON:0001723,2.74e-07,3;UBERON:0001033,2.74e-07,3;UBERON:0010056,2.74e-07,3;UBERON:0003978,2.83e-07,3;UBERON:0009751,2.83e-07,3;UBERON:0000946,2.83e-07,3;UBERON:0002523,2.83e-07,3;UBERON:0005983,2.83e-07,3;UBERON:0002165,2.83e-07,3;UBERON:0002062,2.83e-07,3;UBERON:0007280,2.83e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.522371256399677,0,0,0,0,0.74259811776028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,3.00802746381534,1.01392563272577,1.5905718941022,9.24606253575008,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0.937285727335186,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0.646584227275248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,1.47008711385542,0,0,1.18157981336281,0,0,0,0,0,0,0,0.325808305310325,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.5967024754802,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579125226670317,0.410952645100767,2.50685348535854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0.300946099727719,0,0,0,0,0,0,3.77457766191941,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.247528499761764,0,0,0,1.35339005608971,0.308097234229289,0.921022048356777,1.24052915236078,0,0.580066775656914,0.255679882248303,1.51354460599453,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.79993743535795,3.29294892959902,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0.597743964753209,1.38141957765574,0,0,0,0,0,0,0,1.28236427328014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0.134802265961354,0,0,0,0,0,0.394584402849391,1.20990716048664,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,2.62090002363045,0,0,0,0,0.678923115418936,0,1.12990370390266,0,0,0,0,0,0.85381197895741,0.599428828746391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95497680890578,1.3749625440701,0.717873024576814,0,0.429226048136571,0.669514372325618,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0.597019211547496,0,0,0,0.251567901752575,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.00027764663154,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0,2.97726707033577,0,0,0,0,0,0,0.887023701626388,0,0,0,0,0,0,0.549451649953598,0,0,0,0,0,3.14496794377288,0,0,0,0,0,0,0,1.72090943528111,0,0,0,0,0,0,0,0,0,0,0.923965261706223,2.3196288626764,0,0,0,0,0,0,0,0.0771741581079447,0,0,2.45148321753905,0,0,0,0,0,2.53756578545605,0,0,0,0,0,1.46067277649303,1.83491713361816,0,0,0,0,0,4.09194519983426,4.15958065768276,5.62414530760926,0,0,0,0,0,0,0,0.530450887527676,0.535928260312357,0,0,1.70587185520785,0.476128862927481,0,0,0,0.0636471582781649,0.202117188958219,3.26575121845442,1.02669990325584,0.134704106029175,0.286888821570705,0,0,0,0,0,2.34640942403454,1.22241444182866,0,0,0.603821380773079,0 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|phase1_expression=0,0,0,0,0,0,0,0,0.522371256399677,0,0,0,0,0.74259811776028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,3.00802746381534,1.01392563272577,1.5905718941022,9.24606253575008,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0.937285727335186,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0.646584227275248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,1.47008711385542,0,0,1.18157981336281,0,0,0,0,0,0,0,0.325808305310325,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.5967024754802,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579125226670317,0.410952645100767,2.50685348535854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0.300946099727719,0,0,0,0,0,0,3.77457766191941,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.247528499761764,0,0,0,1.35339005608971,0.308097234229289,0.921022048356777,1.24052915236078,0,0.580066775656914,0.255679882248303,1.51354460599453,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.79993743535795,3.29294892959902,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0.597743964753209,1.38141957765574,0,0,0,0,0,0,0,1.28236427328014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0.134802265961354,0,0,0,0,0,0.394584402849391,1.20990716048664,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,2.62090002363045,0,0,0,0,0.678923115418936,0,1.12990370390266,0,0,0,0,0,0.85381197895741,0.599428828746391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95497680890578,1.3749625440701,0.717873024576814,0,0.429226048136571,0.669514372325618,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0.597019211547496,0,0,0,0.251567901752575,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.00027764663154,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0,2.97726707033577,0,0,0,0,0,0,0.887023701626388,0,0,0,0,0,0,0.549451649953598,0,0,0,0,0,3.14496794377288,0,0,0,0,0,0,0,1.72090943528111,0,0,0,0,0,0,0,0,0,0,0.923965261706223,2.3196288626764,0,0,0,0,0,0,0,0.0771741581079447,0,0,2.45148321753905,0,0,0,0,0,2.53756578545605,0,0,0,0,0,1.46067277649303,1.83491713361816,0,0,0,0,0,4.09194519983426,4.15958065768276,5.62414530760926,0,0,0,0,0,0,0,0.530450887527676,0.535928260312357,0,0,1.70587185520785,0.476128862927481,0,0,0,0.0636471582781649,0.202117188958219,3.26575121845442,1.02669990325584,0.134704106029175,0.286888821570705,0,0,0,0,0,2.34640942403454,1.22241444182866,0,0,0.603821380773079,0 | ||
|short_description=p14@LSP1 | |short_description=p14@LSP1 | ||
}} | }} |
Latest revision as of 04:04, 17 September 2015
Short description: | p14@LSP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_LSP1_5end |
Coexpression cluster: | C2118_Mesenchymal_Chondrocyte_tenocyte_retina_Synoviocyte_heart_spleen |
Association with transcript: | -10bp_to_ENST00000405957, NM_001013253, uc001luk.2_5end |
EntrezGene: | LSP1 |
HGNC: | 6707 |
UniProt: | E9PBV6P33241 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 9.80e-26 | 9 |
carbohydrate secreting cell | 9.80e-26 | 9 |
chondroblast | 7.73e-20 | 6 |
chondrocyte | 7.73e-20 | 6 |
extracellular matrix secreting cell | 1.56e-19 | 15 |
stromal cell | 3.50e-19 | 28 |
fibrocyte | 2.69e-16 | 3 |
tendon cell | 2.69e-16 | 3 |
synovial cell | 8.80e-08 | 3 |
secretory cell | 2.07e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 2.69e-16 | 3 |
tendon | 2.69e-16 | 3 |
regular connective tissue | 2.69e-16 | 3 |
stratified squamous epithelium | 8.80e-08 | 3 |
layer of synovial tissue | 8.80e-08 | 3 |
synovial joint | 8.80e-08 | 3 |
synovial membrane of synovial joint | 8.80e-08 | 3 |
tongue | 2.74e-07 | 3 |
gustatory system | 2.74e-07 | 3 |
future tongue | 2.74e-07 | 3 |
valve | 2.83e-07 | 3 |
cardiac mesenchyme | 2.83e-07 | 3 |
cardial valve | 2.83e-07 | 3 |
tunica intima | 2.83e-07 | 3 |
heart layer | 2.83e-07 | 3 |
endocardium | 2.83e-07 | 3 |
endocardial cushion | 2.83e-07 | 3 |
presumptive endocardium | 2.83e-07 | 3 |