FFCP PHASE1:Hg19::chr11:1774382..1774391,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:1774382..1774391,- | |||
|coexpression_cluster_id=C315 | |||
|description=CAGE_peak_at_chr11:1774382..1774391,- | |description=CAGE_peak_at_chr11:1774382..1774391,- | ||
|id=chr11:1774382..1774391,- | |id=chr11:1774382..1774391,- | ||
|ontology_enrichment_celltype=CL:0000839!1.90e-08!70;CL:0000557!1.25e-07!71;CL:0000766!2.28e-07!76;CL:0002194!7.33e-07!63;CL:0000576!7.33e-07!63;CL:0000040!7.33e-07!63;CL:0000559!7.33e-07!63 | |ontology_enrichment_celltype=CL:0000839!1.90e-08!70;CL:0000557!1.25e-07!71;CL:0000766!2.28e-07!76;CL:0002194!7.33e-07!63;CL:0000576!7.33e-07!63;CL:0000040!7.33e-07!63;CL:0000559!7.33e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000097;4.85e-14;5!CL:0002619;1.01e-13;3!CL:0000235;4.88e-12;6!CL:0000163;8.10e-08;9!CL:0000766;9.99e-08;69!CL:0000473;7.19e-07;39!CL:0000234;7.19e-07;39!CL:0002615;7.54e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,2.85e-14,66;CL:0000557,5.29e-14,67;CL:0002619,6.50e-14,3;CL:0000097,6.50e-14,5;CL:0002028,6.50e-14,5;CL:0000766,9.02e-13,72;CL:0000235,3.18e-12,6;CL:0002194,4.12e-09,59;CL:0000576,4.12e-09,59;CL:0000040,4.12e-09,59;CL:0000559,4.12e-09,59;CL:0002009,9.93e-09,61;CL:0000163,9.47e-08,9;CL:0000763,2.69e-07,108;CL:0000049,2.69e-07,108;CL:0000473,7.22e-07,48;CL:0000234,7.22e-07,48;CL:0002615,8.13e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,9.91e-07,3;DOID:127,9.91e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002405!8.76e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;5.54e-07;6!UBERON:0002358;5.54e-07;6!UBERON:0003684;5.54e-07;6!UBERON:0001178;5.54e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.66e-12,76;UBERON:0001474,9.24e-11,82;UBERON:0004765,1.78e-09,90;UBERON:0002405,4.71e-09,93;UBERON:0002390,2.09e-08,98;UBERON:0003061,2.09e-08,98;UBERON:0001434,3.64e-08,100;UBERON:0002193,2.69e-07,108;UBERON:0000926,6.76e-07,315;UBERON:0004120,6.76e-07,315;UBERON:0006603,6.76e-07,315;UBERON:0003688,7.93e-07,6;UBERON:0002358,7.93e-07,6;UBERON:0003684,7.93e-07,6;UBERON:0001178,7.93e-07,6 | |||
|phase1_expression=0.908391896352783,0.642301571672949,0.845726424575827,2.00146596706261,4.46961094427288,1.74467704820074,0,1.26343974685366,0.783556884599516,0,0,0,0,0,0,1.34465029290355,0,0,0.487932798790507,0,0,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,6.49354875295781,4.85840499028469,1.54545340580512,1.01778767145695,1.88937971844405,0.727752183563449,0.464858073811369,0.822335776043652,0.309706370895104,0.575384784644301,0.256160706529101,0,0,1.29096936716765,0,1.12945403725563,1.36453075028923,0.449446968890169,1.83650335422542,0.320929027076094,0,0.659702600373432,0.199463657621632,0,0.290209238628584,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0.211255286311942,0,0,0.22465726229299,0.150176892841506,0.16072558669708,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0.328875809207352,0.552700035571697,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0.361439152384566,0,0.289693037921647,2.3858578411533,0.973269740605272,0,0,0,0.327447688744282,0.364295288292542,0,0.97364218096405,0.522389211897802,0.398873881556595,0,0,0,0,0,0.347140501607594,0,0,0,0.208994966536811,0,0,0,0.402829317109147,0.760272105718513,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,2.0078563452417,0,0.560677600142307,0,0.49333509683432,0.311211035399766,0,0,0,0,0,0,0.570471821544449,0,0,0,0.280901613404497,0,0.122834317311768,0.103325781175765,0,0.494533858557114,0,0,0,0,0,0,0.30648779579902,0.600952235626387,0,0,0,0.211931901159562,0.300091096084402,0,0,0.18611685633159,0.168776332241266,0.389748020644795,0.252433774244115,0,0.161646056818812,0,0.10075209822764,0,0.193260853163297,0,0.286804595389004,0.121973706129595,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0.330881918197182,0.217879444092406,0,0,0,0.38474715694639,0.738155454624648,0,0,1.47008711385542,0,0.982827216677626,1.77236972004421,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0,0,0.462985512576611,0.380508304469197,0,0,1.96973604869918,0.702012795417713,0.445893486866185,0,0.16798212819886,0,0,0.290633938513962,0,0,2.46535615237033,1.03664057770386,2.88239906833923,3.66103056936502,0.126995788584338,0.763976851116555,1.17217447210047,0,0.308482478109971,0,0.285826432630578,0,0,0,0.129271715757778,0,0,0.531876233169741,0,0,0,0,0,0,0,0.325736184293735,0,0,0.904318131178758,0.871533458600294,0.399891964728228,14.5948536769429,7.03159928004977,6.32501818449095,0.239624855491583,1.14861935834114,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0.12269149171914,0.500170521059677,0,0.207970861530807,0,0,0,0.601892199455438,34.1111256083977,1.03473071292505,0,0,0.0868836144680828,0,1.37257369524342,0,0.431428401637234,0,0,0,0,1.24053903909388,0,0.280660094433074,0.768834895534206,1.02341449813341,0.482561763430822,0,0,0.177561725313127,0.0821271560138091,0,0.232420756919918,0.120859449591622,3.40860999515584,0.368323955743585,0,0.364182336013434,0.393373244878272,0,0,0,0,0,1.13733384070897,0,0,1.54227252690289,0,0.501689773854853,0,0,0,0.219259876645935,0,0,0.328014645699706,0.325378394664303,0.309123034943167,0.183138929636687,0,0,0.650060246036521,0,0.096670718292122,0,0,0,0,0,0.170453254832202,0,0.165284915360978,0,0,0.2023155617111,0,0.31481234683064,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0.421258456238981,0,0,0,0,0.424216295861138,0,0,0,0.438450885253763,0,0,0,0,0.281695602532241,0,0,0.35667105148125,0,0.844430541190656,0.987884678879706,0,0,0.0962221127255121,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0.144269212976445,0,0,0,0,0.211673582723883,0,0.280797178113459,0.228234679033192,0.156679895773023,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0.66614393599564,0,0,0.586032717087576,0,0,0.284136146806413,0.23874448473769,0,0,0,0.281338832821026,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0.311039587661807,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,1.04171104434093,0,0,0.568967241427498,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.307801034015188,1.13942055847001,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0.995261931078505,0.530745387020035,0,0,0,0,0,0,0.234264445725339,0,0,0.242780379534093,0.394584402849391,0,0.30607276163049,0.063186579628488,0,0,0,0,0.313932918407225,0,0,0,0,0.0979923974143777,0.0870592065804026,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0.195551382734803,0.240476460754601,0.213452994739353,0.39961921916426,0,0,0.171594997861965,0,0,0.235694034616795,0,0,0.203996435272644,0.288950589901519,0,0,0,0,0,0,0,0.717873024576814,0,0.429226048136571,0.223171457441873,0,0,0,0,0,0.0674035438541849,0.295282444544246,0,0,0,0,0.275078873194468,0,0,0,0,0.335434687599266,0.472834243795189,0,0,0.35857467866569,0,1.42939065274673,1.32418394073086,0,4.34399681402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| ||
|short_description=p@chr11:1774382..1774391,- | |short_description=p@chr11:1774382..1774391,- | ||
}} | }} |
Latest revision as of 20:30, 23 July 2015
Short description: | p@chr11:1774382..1774391, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:1774382..1774391, - |
Coexpression cluster: | C315_Osteoblast_Preadipocyte_mesenchymal_Smooth_Cardiac_leiomyoma_Adipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 2.85e-14 | 66 |
granulocyte monocyte progenitor cell | 5.29e-14 | 67 |
adult endothelial progenitor cell | 6.50e-14 | 3 |
mast cell | 6.50e-14 | 5 |
basophil mast progenitor cell | 6.50e-14 | 5 |
myeloid leukocyte | 9.02e-13 | 72 |
macrophage | 3.18e-12 | 6 |
monopoietic cell | 4.12e-09 | 59 |
monocyte | 4.12e-09 | 59 |
monoblast | 4.12e-09 | 59 |
promonocyte | 4.12e-09 | 59 |
macrophage dendritic cell progenitor | 9.93e-09 | 61 |
endocrine cell | 9.47e-08 | 9 |
myeloid cell | 2.69e-07 | 108 |
common myeloid progenitor | 2.69e-07 | 108 |
defensive cell | 7.22e-07 | 48 |
phagocyte | 7.22e-07 | 48 |
adipocyte of omentum tissue | 8.13e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.66e-12 | 76 |
bone element | 9.24e-11 | 82 |
skeletal element | 1.78e-09 | 90 |
immune system | 4.71e-09 | 93 |
hematopoietic system | 2.09e-08 | 98 |
blood island | 2.09e-08 | 98 |
skeletal system | 3.64e-08 | 100 |
hemolymphoid system | 2.69e-07 | 108 |
mesoderm | 6.76e-07 | 315 |
mesoderm-derived structure | 6.76e-07 | 315 |
presumptive mesoderm | 6.76e-07 | 315 |
omentum | 7.93e-07 | 6 |
peritoneum | 7.93e-07 | 6 |
abdominal cavity | 7.93e-07 | 6 |
visceral peritoneum | 7.93e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 9.91e-07 | 3 |
leiomyoma | 9.91e-07 | 3 |