FFCP PHASE1:Hg19::chr11:1463728..1463735,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9024 | |EntrezGene=9024 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11405 | |HGNC=11405 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=8bp_to_uc010qwx.1_5end | |association_with_transcript=8bp_to_uc010qwx.1_5end | ||
|cluster_id=chr11:1463728..1463735,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_22_at_BRSK2_5end | |description=CAGE_peak_22_at_BRSK2_5end | ||
|id=chr11:1463728..1463735,+ | |id=chr11:1463728..1463735,+ | ||
|ontology_enrichment_celltype=CL:0000064!7.67e-11!3;CL:0005012!7.67e-11!3;CL:0000067!7.67e-11!3;CL:0002304!7.67e-11!3 | |ontology_enrichment_celltype=CL:0000064!7.67e-11!3;CL:0005012!7.67e-11!3;CL:0000067!7.67e-11!3;CL:0002304!7.67e-11!3 | ||
|ontology_enrichment_celltype_v019=CL:0000306;9.45e-18;4!CL:0002222;9.45e-18;4!CL:0002224;9.45e-18;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,1.03e-17,4;CL:0002222,1.03e-17,4;CL:0002224,1.03e-17,4 | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.79e-88;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!2.73e-24!86;UBERON:0007284!2.73e-24!86;UBERON:0002346!4.48e-23!90;UBERON:0001049!1.69e-22!57;UBERON:0005068!1.69e-22!57;UBERON:0006241!1.69e-22!57;UBERON:0007135!1.69e-22!57;UBERON:0005743!1.60e-18!86;UBERON:0002616!1.67e-18!59;UBERON:0000033!7.17e-18!123;UBERON:0000955!7.72e-18!69;UBERON:0006238!7.72e-18!69;UBERON:0003076!8.59e-18!15;UBERON:0003057!8.59e-18!15;UBERON:0001017!4.62e-17!82;UBERON:0000153!6.86e-17!129;UBERON:0007811!6.86e-17!129;UBERON:0000073!1.59e-16!94;UBERON:0001016!1.59e-16!94;UBERON:0004733!1.05e-15!12;UBERON:0002028!1.05e-15!12;UBERON:0007277!1.05e-15!12;UBERON:0003056!6.22e-15!61;UBERON:0004732!1.75e-14!13;UBERON:0004121!1.40e-13!169;UBERON:0000924!3.46e-13!173;UBERON:0006601!3.46e-13!173;UBERON:0001893!2.44e-12!34;UBERON:0001896!4.90e-11!3;UBERON:0005290!4.90e-11!3;UBERON:0010096!4.90e-11!3;UBERON:0001778!7.67e-11!3;UBERON:0001775!7.67e-11!3;UBERON:0001869!3.86e-10!32;UBERON:0002780!4.20e-10!41;UBERON:0001890!4.20e-10!41;UBERON:0006240!4.20e-10!41;UBERON:0007023!5.72e-10!115;UBERON:0003080!7.64e-10!42;UBERON:0002791!8.21e-10!33;UBERON:0002020!1.67e-09!34;UBERON:0003528!1.67e-09!34;UBERON:0000970!3.12e-09!20;UBERON:0002298!6.17e-09!8;UBERON:0002104!8.79e-09!21;UBERON:0003112!9.02e-09!1;UBERON:0000032!9.02e-09!1;UBERON:0005253!9.02e-09!1;UBERON:0003128!9.02e-09!1;UBERON:0002241!9.02e-09!1;UBERON:0001703!9.02e-09!1;UBERON:0004761!9.02e-09!1;UBERON:0009617!9.02e-09!1;UBERON:0007190!1.22e-08!1;UBERON:0002336!1.32e-08!1;UBERON:0001018!1.32e-08!1;UBERON:0002473!1.32e-08!1;UBERON:0005340!1.32e-08!1;UBERON:0002316!1.32e-08!1;UBERON:0003544!1.32e-08!1;UBERON:0001020!1.32e-08!1;UBERON:0005970!1.32e-08!1;UBERON:0002437!1.32e-08!1;UBERON:0001950!1.47e-08!20;UBERON:0002022!2.22e-08!1;UBERON:0000488!2.40e-08!4;UBERON:0002680!3.40e-08!9;UBERON:0001895!3.40e-08!9;UBERON:0010092!3.40e-08!9;UBERON:0000020!5.33e-08!23;UBERON:0002619!8.50e-08!22;UBERON:0001032!1.17e-07!24;UBERON:0004456!1.17e-07!24;UBERON:0000956!7.13e-07!25;UBERON:0000203!7.13e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.09e-44;6!UBERON:0002680;2.87e-30;9!UBERON:0001895;2.87e-30;9!UBERON:0004733;4.86e-23;12!UBERON:0002028;4.86e-23;12!UBERON:0004732;2.28e-21;13!UBERON:0010077;9.45e-18;4!UBERON:0005389;9.45e-18;4!UBERON:0000484;9.45e-18;4!UBERON:0000965;9.45e-18;4!UBERON:0001803;9.45e-18;4!UBERON:0007625;2.55e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,9.76e-45,6;UBERON:0006215,9.76e-45,6;UBERON:0002680,2.66e-30,9;UBERON:0001895,2.66e-30,9;UBERON:0010092,2.66e-30,9;UBERON:0004733,4.59e-23,12;UBERON:0002028,4.59e-23,12;UBERON:0007277,4.59e-23,12;UBERON:0004732,2.16e-21,13;UBERON:0003076,1.04e-18,15;UBERON:0003057,1.04e-18,15;UBERON:0010077,1.03e-17,4;UBERON:0005389,1.03e-17,4;UBERON:0000484,1.03e-17,4;UBERON:0002546,1.03e-17,4;UBERON:0000965,1.03e-17,4;UBERON:0001803,1.03e-17,4;UBERON:0003073,1.03e-17,4;UBERON:0005426,1.03e-17,4;UBERON:0000076,1.47e-09,8;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0007625,2.63e-07,11 | |||
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|short_description=p22@BRSK2 | |short_description=p22@BRSK2 | ||
}} | }} |
Latest revision as of 21:48, 16 September 2015
Short description: | p22@BRSK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_BRSK2_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 8bp_to_uc010qwx.1_5end |
EntrezGene: | BRSK2 |
HGNC: | 11405 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 1.03e-17 | 4 |
vertebrate lens cell | 1.03e-17 | 4 |
lens epithelial cell | 1.03e-17 | 4 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 9.76e-45 | 6 |
rhombic lip | 9.76e-45 | 6 |
regional part of metencephalon | 2.66e-30 | 9 |
metencephalon | 2.66e-30 | 9 |
future metencephalon | 2.66e-30 | 9 |
segmental subdivision of hindbrain | 4.59e-23 | 12 |
hindbrain | 4.59e-23 | 12 |
presumptive hindbrain | 4.59e-23 | 12 |
segmental subdivision of nervous system | 2.16e-21 | 13 |
posterior neural tube | 1.04e-18 | 15 |
chordal neural plate | 1.04e-18 | 15 |
cuboidal epithelium | 1.03e-17 | 4 |
transparent eye structure | 1.03e-17 | 4 |
simple cuboidal epithelium | 1.03e-17 | 4 |
cranial placode | 1.03e-17 | 4 |
lens of camera-type eye | 1.03e-17 | 4 |
epithelium of lens | 1.03e-17 | 4 |
lens placode | 1.03e-17 | 4 |
lens vesicle | 1.03e-17 | 4 |
external ectoderm | 1.47e-09 | 8 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
pigment epithelium of eye | 2.63e-07 | 11 |