FFCP PHASE1:Hg19::chr11:128141629..128141667,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:128141629..128141667,+ | |||
|coexpression_cluster_id=C1621 | |||
|description=CAGE_peak_at_chr11:128141629..128141667,+ | |description=CAGE_peak_at_chr11:128141629..128141667,+ | ||
|id=chr11:128141629..128141667,+ | |id=chr11:128141629..128141667,+ | ||
|ontology_enrichment_celltype=CL:0000738!9.70e-60!140;CL:0002031!9.49e-57!124;CL:0002087!4.83e-53!119;CL:0000037!9.54e-48!172;CL:0000566!9.54e-48!172;CL:0002032!7.27e-45!165;CL:0000837!7.27e-45!165;CL:0000988!2.81e-44!182;CL:0000838!2.21e-32!52;CL:0000542!1.28e-31!53;CL:0000051!1.28e-31!53;CL:0002057!7.32e-30!42;CL:0000791!1.22e-28!18;CL:0000789!1.22e-28!18;CL:0002420!1.22e-28!18;CL:0002419!1.22e-28!18;CL:0000790!1.22e-28!18;CL:0000860!2.05e-27!45;CL:0000766!1.90e-24!76;CL:0002393!3.53e-24!9;CL:0002397!3.53e-24!9;CL:0000557!3.82e-24!71;CL:0002009!1.38e-21!65;CL:0000839!5.02e-21!70;CL:0000084!1.57e-19!25;CL:0000827!1.57e-19!25;CL:0002194!6.19e-19!63;CL:0000576!6.19e-19!63;CL:0000040!6.19e-19!63;CL:0000559!6.19e-19!63;CL:0000625!3.12e-17!11;CL:0000763!2.54e-16!112;CL:0000049!2.54e-16!112;CL:0000134!1.04e-15!358;CL:0000624!2.44e-15!6;CL:0002320!4.11e-15!365;CL:0000236!6.10e-15!14;CL:0000219!5.18e-13!390;CL:0000034!9.51e-12!444;CL:0000945!1.01e-11!24;CL:0000826!1.01e-11!24;CL:0000048!3.54e-11!430;CL:0000723!8.22e-11!436;CL:0000767!6.71e-10!3;CL:0000875!1.15e-09!3;CL:0002396!1.15e-09!3;CL:0000898!1.62e-08!3 | |ontology_enrichment_celltype=CL:0000738!9.70e-60!140;CL:0002031!9.49e-57!124;CL:0002087!4.83e-53!119;CL:0000037!9.54e-48!172;CL:0000566!9.54e-48!172;CL:0002032!7.27e-45!165;CL:0000837!7.27e-45!165;CL:0000988!2.81e-44!182;CL:0000838!2.21e-32!52;CL:0000542!1.28e-31!53;CL:0000051!1.28e-31!53;CL:0002057!7.32e-30!42;CL:0000791!1.22e-28!18;CL:0000789!1.22e-28!18;CL:0002420!1.22e-28!18;CL:0002419!1.22e-28!18;CL:0000790!1.22e-28!18;CL:0000860!2.05e-27!45;CL:0000766!1.90e-24!76;CL:0002393!3.53e-24!9;CL:0002397!3.53e-24!9;CL:0000557!3.82e-24!71;CL:0002009!1.38e-21!65;CL:0000839!5.02e-21!70;CL:0000084!1.57e-19!25;CL:0000827!1.57e-19!25;CL:0002194!6.19e-19!63;CL:0000576!6.19e-19!63;CL:0000040!6.19e-19!63;CL:0000559!6.19e-19!63;CL:0000625!3.12e-17!11;CL:0000763!2.54e-16!112;CL:0000049!2.54e-16!112;CL:0000134!1.04e-15!358;CL:0000624!2.44e-15!6;CL:0002320!4.11e-15!365;CL:0000236!6.10e-15!14;CL:0000219!5.18e-13!390;CL:0000034!9.51e-12!444;CL:0000945!1.01e-11!24;CL:0000826!1.01e-11!24;CL:0000048!3.54e-11!430;CL:0000723!8.22e-11!436;CL:0000767!6.71e-10!3;CL:0000875!1.15e-09!3;CL:0002396!1.15e-09!3;CL:0000898!1.62e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000236;1.67e-38;13!CL:0000767;2.37e-21;3!CL:0000875;8.75e-21;3!CL:0002396;8.75e-21;3!CL:0000945;3.15e-20;24!CL:0002393;2.27e-17;6!CL:0002397;2.27e-17;6!CL:0000542;6.80e-17;53!CL:0000624;4.71e-10;6!CL:0002087;3.50e-09;104!CL:0000791;1.43e-08;18!CL:0000789;1.43e-08;18!CL:0002419;1.43e-08;18!CL:0000094;2.60e-08;8!CL:0000037;7.96e-08;1!CL:0001024;7.96e-08;1!CL:0000895;7.96e-08;1!CL:0000766;5.19e-07;69!CL:0000576;5.66e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.77e-35,14;CL:0002393,5.42e-35,9;CL:0002397,5.42e-35,9;CL:0000738,3.65e-27,136;CL:0002087,7.99e-25,115;CL:0002031,1.30e-23,120;CL:0000037,4.77e-23,168;CL:0002032,3.18e-22,161;CL:0000837,3.18e-22,161;CL:0000988,1.24e-21,177;CL:0000767,2.37e-21,3;CL:0000838,3.68e-21,52;CL:0000875,8.47e-21,3;CL:0002396,8.47e-21,3;CL:0000542,1.04e-20,53;CL:0000051,1.04e-20,53;CL:0000945,3.99e-20,24;CL:0000826,3.99e-20,24;CL:0000860,3.42e-11,42;CL:0002057,3.42e-11,42;CL:0000766,8.76e-11,72;CL:0000624,3.90e-10,6;CL:0000473,1.30e-09,48;CL:0000234,1.30e-09,48;CL:0000791,1.25e-08,18;CL:0000789,1.25e-08,18;CL:0002420,1.25e-08,18;CL:0002419,1.25e-08,18;CL:0000790,1.25e-08,18;CL:0000134,2.58e-08,354;CL:0000094,2.60e-08,8;CL:0002320,4.71e-08,361;CL:0000810,6.52e-08,1;CL:0000895,6.52e-08,1;CL:0002436,6.52e-08,1;CL:0002427,6.52e-08,1;CL:0002428,6.52e-08,1;CL:0002429,6.52e-08,1;CL:0002433,6.52e-08,1;CL:0002431,6.52e-08,1;CL:0002432,6.52e-08,1;CL:0001024,9.10e-08,1;CL:0002194,2.09e-07,59;CL:0000576,2.09e-07,59;CL:0000040,2.09e-07,59;CL:0000559,2.09e-07,59;CL:0000219,3.91e-07,386;CL:0002009,4.03e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000051;6.80e-17;53!CL:0002057;9.52e-09;42!CL:0000790;1.43e-08;18!CL:0002427;7.96e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.12e-22!102;UBERON:0003061!1.12e-22!102;UBERON:0002371!2.55e-22!80;UBERON:0001474!3.38e-20!86;UBERON:0002193!8.15e-20!112;UBERON:0004765!5.23e-16!101;UBERON:0001434!5.23e-16!101;UBERON:0002405!2.64e-14!115;UBERON:0002384!2.68e-14!375;UBERON:0002204!9.32e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.07e-07,371;UBERON:0002371,9.05e-07,76 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6208354749204,8.82807615623589,7.89562228911988,0,0,0,0.309868802321207,0.995184627411951,2.34880351467878,0.553995408531877,0.601633342410425,1.95309783644267,0,0,0,0,0,0.485168122375632,0,0,0.619412741790207,0,0,2.36482229888585,0.344745680736619,0,0,0,0,0,0.306083892370903,0.320929027076094,0.639337125799041,0,0,0.852449501065388,0.580418477257168,0,0,0.502497330513487,0,2.6062661364614,0,0,0.632924774881769,2.5350634357433,1.91343869968539,5.87044207423452,0.561643155732475,0.600707571366025,0.32145117339416,6.55529310604872,3.38158351238453,4.74926799788048,0,3.82297027883492,2.66852776159066,4.69403244823158,1.20118796110804,1.14950487990897,1.32208974556972,0,2.27685187643779,1.17447437874188,4.20500550937752,6.60856642895129,0,0.790152254325231,1.37696839079683,1.57204305099666,0.205601498999509,0,0.651844533267181,0,0,0,0.294605907474837,0.886135578334485,0.812411591295047,0,0,0,0,0,0.889719378972363,0.802622484269139,1.04535523804977,0,2.68254345521345,5.15441168223945,3.03623630423403,0.318565414324097,0.651083453856419,1.90090408889675,0.903450714466637,0.255973222308837,1.24930726552346,0.236777252044017,0,0.604820229674197,0.534880391567015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646882724578552,0.385029108839245,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6208354749204,8.82807615623589,7.89562228911988,0,0,0,0.309868802321207,0.995184627411951,2.34880351467878,0.553995408531877,0.601633342410425,1.95309783644267,0,0,0,0,0,0.485168122375632,0,0,0.619412741790207,0,0,2.36482229888585,0.344745680736619,0,0,0,0,0,0.306083892370903,0.320929027076094,0.639337125799041,0,0,0.852449501065388,0.580418477257168,0,0,0.502497330513487,0,2.6062661364614,0,0,0.632924774881769,2.5350634357433,1.91343869968539,5.87044207423452,0.561643155732475,0.600707571366025,0.32145117339416,6.55529310604872,3.38158351238453,4.74926799788048,0,3.82297027883492,2.66852776159066,4.69403244823158,1.20118796110804,1.14950487990897,1.32208974556972,0,2.27685187643779,1.17447437874188,4.20500550937752,6.60856642895129,0,0.790152254325231,1.37696839079683,1.57204305099666,0.205601498999509,0,0.651844533267181,0,0,0,0.294605907474837,0.886135578334485,0.812411591295047,0,0,0,0,0,0.889719378972363,0.802622484269139,1.04535523804977,0,2.68254345521345,5.15441168223945,3.03623630423403,0.318565414324097,0.651083453856419,1.90090408889675,0.903450714466637,0.255973222308837,1.24930726552346,0.236777252044017,0,0.604820229674197,0.534880391567015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646882724578552,0.385029108839245,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:128141629..128141667,+ | |short_description=p@chr11:128141629..128141667,+ | ||
}} | }} |
Latest revision as of 19:51, 23 July 2015
Short description: | p@chr11:128141629..128141667, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:128141629..128141667, + |
Coexpression cluster: | C1621_Basophils_CD14CD16_CD14_CD4_CD34_Natural_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.07e-07 | 371 |
bone marrow | 9.05e-07 | 76 |