FFCP PHASE1:Hg19::chr11:12495305..12495321,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55742 | |EntrezGene=55742 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14652 | |HGNC=14652 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=14bp_to_ENST00000526746,ENST00000533392_5end | |association_with_transcript=14bp_to_ENST00000526746,ENST00000533392_5end | ||
|cluster_id=chr11:12495305..12495321,+ | |||
|description=CAGE_peak_2_at_PARVA_5end | |description=CAGE_peak_2_at_PARVA_5end | ||
|id=chr11:12495305..12495321,+ | |id=chr11:12495305..12495321,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.84e-18!180;CL:0000057!7.11e-11!75;CL:0000220!3.02e-09!246;CL:0000222!4.84e-09!119;CL:0002321!4.88e-09!248;CL:0000680!1.90e-07!57;CL:0000056!1.90e-07!57;CL:0000355!1.90e-07!57 | |ontology_enrichment_celltype=CL:0000055!2.84e-18!180;CL:0000057!7.11e-11!75;CL:0000220!3.02e-09!246;CL:0000222!4.84e-09!119;CL:0002321!4.88e-09!248;CL:0000680!1.90e-07!57;CL:0000056!1.90e-07!57;CL:0000355!1.90e-07!57 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.67e-07!14 | |ontology_enrichment_disease=DOID:2394!2.67e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:0060072;2.71e-07;4!DOID:2394;6.34e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:0060072,3.26e-07,4;DOID:2394,3.86e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.09e-09!83;UBERON:0002329!1.09e-09!83;UBERON:0003077!1.09e-09!83;UBERON:0003059!1.09e-09!83;UBERON:0007282!1.09e-09!83;UBERON:0009618!1.09e-09!83;UBERON:0007285!1.09e-09!83;UBERON:0005256!3.65e-09!143;UBERON:0002049!9.50e-09!79;UBERON:0007798!9.50e-09!79;UBERON:0000475!1.32e-08!365;UBERON:0000468!2.31e-08!659;UBERON:0004872!4.15e-08!84;UBERON:0003914!4.16e-08!118;UBERON:0001637!5.82e-08!42;UBERON:0003509!5.82e-08!42;UBERON:0004572!5.82e-08!42;UBERON:0004290!6.48e-08!70;UBERON:0002100!6.76e-08!216;UBERON:0001981!7.45e-08!60;UBERON:0007500!7.45e-08!60;UBERON:0004537!7.45e-08!60;UBERON:0006965!7.45e-08!60;UBERON:0000481!1.09e-07!347;UBERON:0002385!1.91e-07!63;UBERON:0001015!1.91e-07!63;UBERON:0000383!1.91e-07!63;UBERON:0003104!3.83e-07!238;UBERON:0009142!3.83e-07!238;UBERON:0000486!4.53e-07!82;UBERON:0001134!4.56e-07!61;UBERON:0002036!4.56e-07!61;UBERON:0003082!4.56e-07!61;UBERON:0003102!4.67e-07!95;UBERON:0000477!6.38e-07!286;UBERON:0000055!8.92e-07!69 | |ontology_enrichment_uberon=UBERON:0000914!1.09e-09!83;UBERON:0002329!1.09e-09!83;UBERON:0003077!1.09e-09!83;UBERON:0003059!1.09e-09!83;UBERON:0007282!1.09e-09!83;UBERON:0009618!1.09e-09!83;UBERON:0007285!1.09e-09!83;UBERON:0005256!3.65e-09!143;UBERON:0002049!9.50e-09!79;UBERON:0007798!9.50e-09!79;UBERON:0000475!1.32e-08!365;UBERON:0000468!2.31e-08!659;UBERON:0004872!4.15e-08!84;UBERON:0003914!4.16e-08!118;UBERON:0001637!5.82e-08!42;UBERON:0003509!5.82e-08!42;UBERON:0004572!5.82e-08!42;UBERON:0004290!6.48e-08!70;UBERON:0002100!6.76e-08!216;UBERON:0001981!7.45e-08!60;UBERON:0007500!7.45e-08!60;UBERON:0004537!7.45e-08!60;UBERON:0006965!7.45e-08!60;UBERON:0000481!1.09e-07!347;UBERON:0002385!1.91e-07!63;UBERON:0001015!1.91e-07!63;UBERON:0000383!1.91e-07!63;UBERON:0003104!3.83e-07!238;UBERON:0009142!3.83e-07!238;UBERON:0000486!4.53e-07!82;UBERON:0001134!4.56e-07!61;UBERON:0002036!4.56e-07!61;UBERON:0003082!4.56e-07!61;UBERON:0003102!4.67e-07!95;UBERON:0000477!6.38e-07!286;UBERON:0000055!8.92e-07!69 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,5.32e-07,15 | |||
|phase1_expression=0.726713517082227,4.28201047781966,1.26858963686374,7.00513088471913,0.893922188854576,2.61701557230111,0,1.26343974685366,1.56711376919903,0,0,0,0.527533956456907,0.866364470720326,0.662794751455832,3.36162573225888,2.41077811209591,1.46062018077475,1.95173119516203,0.123121058076788,0.204000691244253,0,0.286235987131057,0.410623275218653,0.502170558379211,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.383587685530591,1.0843174571537,0.50133791063589,2.17269778441236,0.795285947051099,0.486634870302636,0.472674085820339,1.10864698731282,0.790513071238134,0.196468613246569,0,0,0,0,0,0,0,0,0.596287222100115,0.860234595106124,0.347140501607594,0.56530794192401,1.25849830862972,0.550236083880135,0.417989933073621,0.258416759169329,0,0,0.402829317109147,0,1.46437234528902,0,1.62028389576352,0.17859945656816,0.673588117878509,0.450445921933289,0,0,1.46561395144326,0,0,0,0.496971951695318,0.633152558322899,0.132409180813219,0.286836620748814,0.709336764396714,1.12135520028461,2.1349799145941,0.98667019366864,0,0.942974704487816,0.817309515567294,0.454072282934794,0.576175924479999,0.468642863667593,0.936480230490962,0,0.896692083310806,0.352303495931295,0.323745888736263,0.421352420106746,0,0.737005903870608,0.516628905878827,1.18800285728205,3.21447008062124,0,0.718618141816238,0.505008341862199,0.625592599359821,0,2.63386572528503,5.21029252858333,1.35214253015937,0.567160915800105,0.358779271377724,1.49490172172997,0.423863802319124,0.300091096084402,1.44273540933814,0.772921620136887,0.744467425326359,0.168776332241266,0.584622030967192,0.504867548488229,0.460249493211497,0.646584227275248,0,0.403008392910561,1.18692414617341,0.57978255948989,0.545492241181669,0.286804595389004,0,0.132529768321485,0.116193942869518,0.414644220061482,0,0,0,5.78916844373597,1.38134921352481,2.3218396401599,2.88751792667834,0.354920400119532,1.01150814046861,0.723033089650446,0.441175890929576,0.435758888184812,0.474541238222193,1.07865046528132,0.392442930250692,0.38474715694639,0,0,0.4115740113314,0,1.26755034821831,0,0.590789906681404,0,0,0.343135620597051,0,0,0.603173834469785,0.370353780634118,0,0,1.44331342025273,0.115930404975077,0.117408694235822,0.577465791044295,0,1.14152491340759,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0.581267877027924,0.383382679165211,0,0,0,0,0,0.253991577168676,0.763976851116555,1.17217447210047,1.71072446022705,1.13110241973656,1.20137223137567,0.285826432630578,0.112131084345361,0,0.22001485746285,0.258543431515556,0,0.845302752556,0.797814349754612,1.04007436911366,0.257207374262142,0,1.5985330740966,0.428933980974443,0,0.823240336780769,0,1.06617584622764,0.791951872933429,0.602878754119172,1.74306691720059,1.09970290300263,0,0,0,1.19812427745791,1.14861935834114,0,1.01346914667305,1.84928690295345,0.358121926479791,0,0,0,0,0.254094624222463,1.30139853857622,0.773288812777695,0,0,0,0,0,0.24538298343828,0.500170521059677,0.271265023699736,2.07970861530807,7.31558854068363,2.68094105557689,0.585707074963566,0.300946099727719,0,1.03473071292505,0,1.10621501125022,1.04260337361699,0,0,0,0,0,0,0,0.604780586659361,0.992431231275107,0.61384789315225,4.2099014164961,0.768834895534206,2.04682899626681,1.28683136914886,0,1.54209693802656,0.887808626565635,0.164254312027618,1.55776328755086,1.16210378459959,0.120859449591622,0.40101294060657,0.184161977871793,1.26295892981067,0.910455840033585,2.36023946926963,0.451199612907412,0,0,0,0.527758144464379,1.13733384070897,0.680374821106063,0.863663664408557,0,0.270946437543853,1.00337954770971,0,1.66215201785745,0.447749509444357,0,0,0,0.328014645699706,0.976135183992909,0.206082023295445,0.183138929636687,0.082509499920588,0,1.30012049207304,0,0.386682873168488,0.462145851343933,1.22802939780904,0.964856007391714,0.214840489736547,0.725083469571143,0.340906509664404,0.178064071293475,0.495854746082934,1.15314040419064,0,0.30347334256665,1.39453664789186,0.94443704049192,0,0,0,0,0.55597265731176,0.715624433709956,0.744316738719335,0.316379424718726,0.571890581771475,0.511795582622668,0,0.95460974377781,0.78494864019923,1.2591072030832,1.92175920815238,1.17812402345686,0.202182481573316,1.58510321173008,0.842516912477962,0.48763373908959,1.21856744815642,1.05650146756755,0,2.2624869112594,1.13008116620243,0.551365343546124,0,1.31535265576129,0,0,0,3.0982349809975,1.12678241012897,0,0.491245205065606,1.07001315444375,0,2.11107635297664,1.97576935775941,0.379473173765715,0.349934720244983,0.0962221127255121,0,1.08890984861323,0.282431402330337,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,1.92495971052672,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0.121360521749513,0,0.284136146806413,0,0.593929361665277,0,0,0,0.222617410045812,0,0.211125408127993,1.9924798825107,0.552567831062295,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| ||
|short_description=p2@PARVA | |short_description=p2@PARVA | ||
}} | }} |
Latest revision as of 12:39, 16 September 2015
Short description: | p2@PARVA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PARVA_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_ENST00000526746, ENST00000533392_5end |
EntrezGene: | PARVA |
HGNC: | 14652 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 5.32e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
benign neoplasm | 3.26e-07 | 4 |
ovarian cancer | 3.86e-07 | 14 |