FFCP PHASE1:Mm9::chr7:20355858..20355875,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=57278 | |EntrezGene=57278 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3347 | |||
|TSSclassifier=NA | |||
|UniProt=Q9R069,Q8BGB4 | |UniProt=Q9R069,Q8BGB4 | ||
|association_with_transcript=5bp_to_NM_020486,uc009fnf.1,uc009fng.1_5end | |association_with_transcript=5bp_to_NM_020486,uc009fnf.1,uc009fng.1_5end | ||
|cluster_id=chr7:20355858..20355875,- | |||
|description=CAGE_peak_2_at_Bcam_5end | |description=CAGE_peak_2_at_Bcam_5end | ||
|id=chr7:20355858..20355875,- | |id=chr7:20355858..20355875,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003103!1.32e-14!43;UBERON:0007100!3.90e-10!18;UBERON:0000948!3.90e-10!18;UBERON:0005498!3.90e-10!18;UBERON:0004140!3.90e-10!18;UBERON:0009881!3.90e-10!18;UBERON:0004141!3.90e-10!18;UBERON:0003084!3.90e-10!18;UBERON:0007005!3.90e-10!18;UBERON:0004139!3.90e-10!18;UBERON:0004291!3.90e-10!18;UBERON:0005178!1.32e-09!17;UBERON:0005181!1.32e-09!17;UBERON:0002224!1.32e-09!17;UBERON:0000915!1.32e-09!17;UBERON:0008947!1.32e-09!17;UBERON:0003258!1.32e-09!17;UBERON:0002048!1.69e-09!14;UBERON:0000117!1.69e-09!14;UBERON:0000171!1.69e-09!14;UBERON:0000170!1.69e-09!14;UBERON:0005597!1.69e-09!14;UBERON:0000118!1.69e-09!14;UBERON:0000468!2.39e-09!333;UBERON:0000464!1.40e-08!57;UBERON:0004535!1.48e-08!23;UBERON:0001009!1.48e-08!23;UBERON:0005153!1.86e-08!17;UBERON:0005177!6.20e-07!85 | |ontology_enrichment_uberon=UBERON:0003103!1.32e-14!43;UBERON:0007100!3.90e-10!18;UBERON:0000948!3.90e-10!18;UBERON:0005498!3.90e-10!18;UBERON:0004140!3.90e-10!18;UBERON:0009881!3.90e-10!18;UBERON:0004141!3.90e-10!18;UBERON:0003084!3.90e-10!18;UBERON:0007005!3.90e-10!18;UBERON:0004139!3.90e-10!18;UBERON:0004291!3.90e-10!18;UBERON:0005178!1.32e-09!17;UBERON:0005181!1.32e-09!17;UBERON:0002224!1.32e-09!17;UBERON:0000915!1.32e-09!17;UBERON:0008947!1.32e-09!17;UBERON:0003258!1.32e-09!17;UBERON:0002048!1.69e-09!14;UBERON:0000117!1.69e-09!14;UBERON:0000171!1.69e-09!14;UBERON:0000170!1.69e-09!14;UBERON:0005597!1.69e-09!14;UBERON:0000118!1.69e-09!14;UBERON:0000468!2.39e-09!333;UBERON:0000464!1.40e-08!57;UBERON:0004535!1.48e-08!23;UBERON:0001009!1.48e-08!23;UBERON:0005153!1.86e-08!17;UBERON:0005177!6.20e-07!85 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003103,8.97e-15,43;UBERON:0007100,3.03e-10,18;UBERON:0000948,3.03e-10,18;UBERON:0005498,3.03e-10,18;UBERON:0004140,3.03e-10,18;UBERON:0009881,3.03e-10,18;UBERON:0004141,3.03e-10,18;UBERON:0003084,3.03e-10,18;UBERON:0007005,3.03e-10,18;UBERON:0004139,3.03e-10,18;UBERON:0004291,3.03e-10,18;UBERON:0005178,1.04e-09,17;UBERON:0005181,1.04e-09,17;UBERON:0002224,1.04e-09,17;UBERON:0000915,1.04e-09,17;UBERON:0008947,1.04e-09,17;UBERON:0003258,1.04e-09,17;UBERON:0002048,1.34e-09,14;UBERON:0000117,1.34e-09,14;UBERON:0000171,1.34e-09,14;UBERON:0000170,1.34e-09,14;UBERON:0005597,1.34e-09,14;UBERON:0000118,1.34e-09,14;UBERON:0005153,1.52e-08,17;UBERON:0004535,2.09e-08,23;UBERON:0001009,2.09e-08,23;UBERON:0005177,2.67e-07,79 | |||
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|short_description=p2@Bcam | |short_description=p2@Bcam | ||
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Latest revision as of 09:06, 26 September 2015
Short description: | p2@Bcam |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Bcam_5end |
Coexpression cluster: | MCL_coexpression_mm9:3347 |
Association with transcript: | 5bp_to_NM_020486, uc009fnf.1, uc009fng.1_5end |
EntrezGene: | Bcam |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
compound organ | 8.97e-15 | 43 |
primary circulatory organ | 3.03e-10 | 18 |
heart | 3.03e-10 | 18 |
primitive heart tube | 3.03e-10 | 18 |
primary heart field | 3.03e-10 | 18 |
anterior lateral plate mesoderm | 3.03e-10 | 18 |
heart tube | 3.03e-10 | 18 |
heart primordium | 3.03e-10 | 18 |
cardiac mesoderm | 3.03e-10 | 18 |
cardiogenic plate | 3.03e-10 | 18 |
heart rudiment | 3.03e-10 | 18 |
thoracic cavity element | 1.04e-09 | 17 |
thoracic segment organ | 1.04e-09 | 17 |
thoracic cavity | 1.04e-09 | 17 |
thoracic segment of trunk | 1.04e-09 | 17 |
respiratory primordium | 1.04e-09 | 17 |
endoderm of foregut | 1.04e-09 | 17 |
lung | 1.34e-09 | 14 |
respiratory tube | 1.34e-09 | 14 |
respiration organ | 1.34e-09 | 14 |
pair of lungs | 1.34e-09 | 14 |
lung primordium | 1.34e-09 | 14 |
lung bud | 1.34e-09 | 14 |
epithelial bud | 1.52e-08 | 17 |
cardiovascular system | 2.09e-08 | 23 |
circulatory system | 2.09e-08 | 23 |
trunk region element | 2.67e-07 | 79 |