FFCP PHASE1:Mm9::chr7:17502533..17502561,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12313,12314,12315 | |EntrezGene=12313,12314,12315 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=741 | |||
|TSSclassifier=NA | |||
|UniProt=G3UZ90 | |UniProt=G3UZ90 | ||
|association_with_transcript=0bp_to_ENSMUST00000173139_5end | |association_with_transcript=0bp_to_ENSMUST00000173139_5end | ||
|cluster_id=chr7:17502533..17502561,- | |||
|description=CAGE_peak_5_at_Calm2_5end,CAGE_peak_6_at_Calm3_5end,CAGE_peak_7_at_Calm1_5end | |description=CAGE_peak_5_at_Calm2_5end,CAGE_peak_6_at_Calm3_5end,CAGE_peak_7_at_Calm1_5end | ||
|id=chr7:17502533..17502561,- | |id=chr7:17502533..17502561,- | ||
|ontology_enrichment_celltype=CL:0000055!7.09e-14!50;CL:0002319!7.32e-13!43;CL:0000221!1.35e-12!44;CL:0000133!1.35e-12!44;CL:0000393!3.02e-12!39;CL:0000211!3.02e-12!39;CL:0000117!8.54e-12!23;CL:0000337!8.54e-12!23;CL:0000540!2.65e-10!33;CL:0000047!2.65e-10!33;CL:0000031!2.65e-10!33;CL:0000404!2.65e-10!33;CL:0002321!5.43e-09!70;CL:0000220!5.43e-09!70 | |ontology_enrichment_celltype=CL:0000055!7.09e-14!50;CL:0002319!7.32e-13!43;CL:0000221!1.35e-12!44;CL:0000133!1.35e-12!44;CL:0000393!3.02e-12!39;CL:0000211!3.02e-12!39;CL:0000117!8.54e-12!23;CL:0000337!8.54e-12!23;CL:0000540!2.65e-10!33;CL:0000047!2.65e-10!33;CL:0000031!2.65e-10!33;CL:0000404!2.65e-10!33;CL:0002321!5.43e-09!70;CL:0000220!5.43e-09!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,7.18e-16,43;CL:0000221,3.56e-15,44;CL:0000133,3.56e-15,44;CL:0000393,4.67e-15,39;CL:0000211,4.67e-15,39;CL:0000117,5.81e-15,23;CL:0000337,5.81e-15,23;CL:0000540,1.59e-12,33;CL:0000047,1.59e-12,33;CL:0000031,1.59e-12,33;CL:0000404,1.59e-12,33;CL:0002321,2.69e-11,70;CL:0000723,5.39e-08,91;CL:0000048,5.39e-08,91 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.75e-25!73;UBERON:0005743!7.75e-25!73;UBERON:0000073!1.25e-23!75;UBERON:0001016!1.25e-23!75;UBERON:0001049!3.78e-19!52;UBERON:0005068!3.78e-19!52;UBERON:0006241!3.78e-19!52;UBERON:0007135!3.78e-19!52;UBERON:0000955!8.81e-18!50;UBERON:0006238!8.81e-18!50;UBERON:0002616!2.06e-17!49;UBERON:0002020!2.35e-17!34;UBERON:0002346!9.80e-16!71;UBERON:0003075!9.80e-16!71;UBERON:0007284!9.80e-16!71;UBERON:0002791!2.61e-14!29;UBERON:0003528!2.61e-14!29;UBERON:0001893!2.61e-14!29;UBERON:0000033!3.14e-14!63;UBERON:0004121!4.38e-14!102;UBERON:0000924!4.38e-14!102;UBERON:0006601!4.38e-14!102;UBERON:0003080!4.45e-13!40;UBERON:0002780!6.91e-13!39;UBERON:0001890!6.91e-13!39;UBERON:0006240!6.91e-13!39;UBERON:0003056!1.21e-11!49;UBERON:0000956!6.54e-11!21;UBERON:0001869!6.54e-11!21;UBERON:0000203!6.54e-11!21;UBERON:0002619!3.65e-10!17;UBERON:0002021!6.26e-08!10;UBERON:0000411!6.26e-08!10;UBERON:0001950!6.26e-08!10;UBERON:0007811!4.63e-07!86;UBERON:0003076!4.90e-07!12;UBERON:0003057!4.90e-07!12 | |ontology_enrichment_uberon=UBERON:0001017!7.75e-25!73;UBERON:0005743!7.75e-25!73;UBERON:0000073!1.25e-23!75;UBERON:0001016!1.25e-23!75;UBERON:0001049!3.78e-19!52;UBERON:0005068!3.78e-19!52;UBERON:0006241!3.78e-19!52;UBERON:0007135!3.78e-19!52;UBERON:0000955!8.81e-18!50;UBERON:0006238!8.81e-18!50;UBERON:0002616!2.06e-17!49;UBERON:0002020!2.35e-17!34;UBERON:0002346!9.80e-16!71;UBERON:0003075!9.80e-16!71;UBERON:0007284!9.80e-16!71;UBERON:0002791!2.61e-14!29;UBERON:0003528!2.61e-14!29;UBERON:0001893!2.61e-14!29;UBERON:0000033!3.14e-14!63;UBERON:0004121!4.38e-14!102;UBERON:0000924!4.38e-14!102;UBERON:0006601!4.38e-14!102;UBERON:0003080!4.45e-13!40;UBERON:0002780!6.91e-13!39;UBERON:0001890!6.91e-13!39;UBERON:0006240!6.91e-13!39;UBERON:0003056!1.21e-11!49;UBERON:0000956!6.54e-11!21;UBERON:0001869!6.54e-11!21;UBERON:0000203!6.54e-11!21;UBERON:0002619!3.65e-10!17;UBERON:0002021!6.26e-08!10;UBERON:0000411!6.26e-08!10;UBERON:0001950!6.26e-08!10;UBERON:0007811!4.63e-07!86;UBERON:0003076!4.90e-07!12;UBERON:0003057!4.90e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.63e-30,73;UBERON:0001016,5.54e-29,75;UBERON:0000073,2.26e-25,54;UBERON:0001049,1.32e-23,52;UBERON:0005068,1.32e-23,52;UBERON:0006241,1.32e-23,52;UBERON:0007135,1.32e-23,52;UBERON:0002020,2.98e-22,34;UBERON:0002346,1.28e-20,64;UBERON:0003075,1.28e-20,64;UBERON:0007284,1.28e-20,64;UBERON:0004121,1.06e-19,95;UBERON:0000924,1.06e-19,95;UBERON:0006601,1.06e-19,95;UBERON:0000955,2.01e-19,47;UBERON:0006238,2.01e-19,47;UBERON:0002616,5.92e-19,46;UBERON:0003528,2.95e-18,29;UBERON:0002791,2.95e-18,29;UBERON:0001893,2.95e-18,29;UBERON:0010371,2.84e-16,73;UBERON:0003080,9.71e-16,40;UBERON:0002780,1.74e-15,39;UBERON:0001890,1.74e-15,39;UBERON:0006240,1.74e-15,39;UBERON:0000956,8.36e-14,21;UBERON:0001869,8.36e-14,21;UBERON:0000203,8.36e-14,21;UBERON:0010314,1.10e-13,92;UBERON:0002619,7.94e-13,17;UBERON:0003056,1.42e-12,49;UBERON:0002021,6.63e-10,10;UBERON:0000411,6.63e-10,10;UBERON:0001950,6.63e-10,10;UBERON:0003076,9.75e-09,12;UBERON:0003057,9.75e-09,12;UBERON:0000025,2.53e-07,114 | |||
|phase1_expression=1.28119077683835,0.348975407639361,1.36499771816861,0.90739263392049,0.500895729946347,0.671517087647559,1.40167584357315,0.387369970324729,0.140788722151667,0.234064526321993,0.171217968225505,0.319088635981346,0.342401459862411,0.0874204024189974,1.33243904726265,0.607425802169478,2.79824751251259,0.946386496074713,0.411343300817216,0,0.765389611359628,0.397163804803541,0.522399578277871,1.43993180514066,2.75291137280604,0.57423196411502,0,0.430942465371778,3.23039813075836,0,1.33038306393183,0,1.84519436275371,0,0,0.498703936075477,0.816677425049476,1.25559489221072,0,1.0470474879476,0.588231488031014,0,0.971020706062307,1.38486499773135,1.52065396829272,1.46837401729345,2.34717403304412,3.48840250208714,1.5378032791413,2.3331587888914,3.3596741190087,7.18762821824858,0,2.17608642603403,0.672187598284928,2.82985379639542,4.01146815914259,3.6097046459421,3.03474691289397,6.34789175126439,3.80298842103708,1.69422266034566,3.55717918444456,2.2497492932035,7.9109309005358,2.1314403448383,6.89080254192331,11.5265491596466,1.45165457231869,3.37514845829227,1.05162480675691,7.9982275633065,7.95126747425809,2.08234358665422,2.30029130443767,1.83843757322004,16.5173821499083,6.38436690425939,6.29786786350598,1.84640802822271,5.58074625974699,1.56274011167028,10.3297709630511,8.4414391504752,4.73674568108111,10.0173719061047,10.2507610175354,2.60959224155421,0.605809546665472,0.377857800533928,0.579728977403356,0,0,0.539703191637817,0.649776417447669,0,0.421333260395256,1.53387290320252,1.55871602761721,1.41335829804136,0.704217098883403,2.56652954828636,0,0,1.08245520505607,0.760079596425296,1.51657333504435,0.5709193985953,0.258937883647172,0,0.867426633830679,1.52232739156071,0.230615497256059,0.60289056221049,0.705532242814229,0.753999547978053,0.494389935468748,0.144599356919912,0.884610551949874,0.485300549842228,0.441683036920787,0.484875253135222,1.86391761218122,1.75668478206928,2.51336048176146,1.02182822083437,1.43778149407104,0,0.762421362438388,1.49790639404823,4.57500602818627,1.13088916901578,1.91206752211504,5.37002460393694,3.32460871295296,4.2182728397617,0.81471491080253,0.497627882440372,0,1.05220927943237,0.910843100738926,0.689706313300419,0.360124259610698,1.50704817835715,0.408218994907967,0.768682321709099,0.937017245597288,1.55222022443409,0.862271971731369,0.945530400839096,0.527853372491847,0.876782929710299,0.834141747676794,0,0.205782136407943,0.398068533636986,0.702213187313235,0.772043721344145,1.42081749697796,0.414251545071004,0.938104239924385,1.2604344302271,1.18372367792605,1.37734962223183,0.308534225774757,0.930135779001631,0,0.934122738937356,0.987359099480883,0.656669856316381,0.486412857275134,0.730999937126662,0.439100230582101,0.671032093801859,3.78521907415429,2.88132914661996,1.98251269790279,0.793351699990633,0.426576501070468,0,0.644337306610467,1.00841762311671,1.77902435075896,0.760902504450237,2.84717436926707,0.658795818896044,1.00534083520108,0.994782360205754,1.55971269695296,1.79763881730844,2.16138049874694,2.38969527905241,1.51734320762465,0.228497025219458,1.1270773567308,1.62921062276251,0.193952487167626,0.841629838683823,0.505892296994058,0.442830443938806,0.31399745568275,0.616985819609003,0,0.333690211432188,0.393117990226406,0.224862112384854,0.608580364165509,0.482354319504834,1.52775511068852,0.287696137450811,0.648540907100142,0.549122826376163,2.87536413054709,0,0.312037673114561,0.252578877947112,0.358794827043824,0.482443521363367,0.184753190166605,0.189491411770485,0.325929952884052,1.01847051465113,1.17345124144251,0.335012514883631,0.714130922658041,0.975668239288994,0.315270288212382,0.8858587585951,0.637819074629948,0.163863314715738,0.172684981865896,1.15719246865209,0,1.63171705145613,0,0.551873492609465,2.72936002979246,2.34423373184406,1.63934945376675,0.252470927204373,1.26203287766503,1.17131623288992,1.72338718186239,0.955875191810208,0.668396022247182,0.566153061577665,0,1.75353514746787,1.18586333383957,1.92792789853084,0.283880170416537,2.13678724400706,0.325773918707152,0.989820737835213,0,1.45668381692989,3.02323556964751,0.565815239267694,0.590603785761546,0.614870295887855,0,1.09060118843252,0.712994756769443,0.632073515871632,0,1.03135543248187,0.680879211507576,0,1.68166288917581,0.857348140126369,0.709360934569094,1.07021290561242,1.15184314421485,0.608929898229199,0.23467170806371,0.42366414172764,0.220528398054962,0.32977250588296,0.322928853391811,0.241251699712623,0.477489376012546,0.164140899745061,1.1659233465194,4.63563255026274,0.170870880797853,0.412773735926445,0.555583582109135,0.941842285023455,0.410082683163076,0.457556346413045,0.679913719975421,0.559805809294632,0.138199973804424,0.954670618015114,0.316335993581135,1.01659733563424,0.756037385752609,0.209088296014469,0.218362563746178,0.674321731924103,0.41326727862668,0.523511883968059,1.55537967950151,0,6.76431526421028,0.598066184175915,0.496375471371293,0.388902376688095,0.904118764344118,0.675824501963113,0.469428954583016,0.3906131545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| ||
|short_description=p5@Calm2,p6@Calm3,p7@Calm1 | |short_description=p5@Calm2,p6@Calm3,p7@Calm1 | ||
}} | }} |
Latest revision as of 07:20, 26 September 2015
Short description: | p5@Calm2, p6@Calm3, p7@Calm1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Calm2_5end, CAGE_peak_6_at_Calm3_5end, CAGE_peak_7_at_Calm1_5end |
Coexpression cluster: | MCL_coexpression_mm9:741 |
Association with transcript: | 0bp_to_ENSMUST00000173139_5end |
EntrezGene: | 12313,12314,12315 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 7.18e-16 | 43 |
ectodermal cell | 3.56e-15 | 44 |
neurectodermal cell | 3.56e-15 | 44 |
electrically responsive cell | 4.67e-15 | 39 |
electrically active cell | 4.67e-15 | 39 |
CNS neuron (sensu Vertebrata) | 5.81e-15 | 23 |
neuroblast (sensu Vertebrata) | 5.81e-15 | 23 |
neuron | 1.59e-12 | 33 |
neuronal stem cell | 1.59e-12 | 33 |
neuroblast | 1.59e-12 | 33 |
electrically signaling cell | 1.59e-12 | 33 |
embryonic cell | 2.69e-11 | 70 |
somatic stem cell | 5.39e-08 | 91 |
multi fate stem cell | 5.39e-08 | 91 |