FFCP PHASE1:Hg19::chr11:120207031..120207060,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23365 | |EntrezGene=23365 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=14193 | |HGNC=14193 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-152bp_to_BX648515_5end | |association_with_transcript=-152bp_to_BX648515_5end | ||
|cluster_id=chr11:120207031..120207060,+ | |||
|description=CAGE_peak_2_at_ARHGEF12_5end | |description=CAGE_peak_2_at_ARHGEF12_5end | ||
|id=chr11:120207031..120207060,+ | |id=chr11:120207031..120207060,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.76e-22!115;UBERON:0000924!4.03e-16!173;UBERON:0006601!4.03e-16!173;UBERON:0000073!3.33e-15!94;UBERON:0001016!3.33e-15!94;UBERON:0004121!4.32e-15!169;UBERON:0005743!1.57e-14!86;UBERON:0002346!1.98e-13!90;UBERON:0001017!2.62e-13!82;UBERON:0003075!2.31e-12!86;UBERON:0007284!2.31e-12!86;UBERON:0000481!3.63e-12!347;UBERON:0000955!1.02e-11!69;UBERON:0006238!1.02e-11!69;UBERON:0000033!1.16e-11!123;UBERON:0001049!1.56e-11!57;UBERON:0005068!1.56e-11!57;UBERON:0006241!1.56e-11!57;UBERON:0007135!1.56e-11!57;UBERON:0000477!1.74e-11!286;UBERON:0002616!1.46e-10!59;UBERON:0000475!1.60e-10!365;UBERON:0000153!2.39e-10!129;UBERON:0007811!2.39e-10!129;UBERON:0000119!6.65e-10!312;UBERON:0000483!6.82e-10!309;UBERON:0004111!7.09e-10!241;UBERON:0000468!7.86e-10!659;UBERON:0003080!3.09e-08!42;UBERON:0002780!6.21e-08!41;UBERON:0001890!6.21e-08!41;UBERON:0006240!6.21e-08!41;UBERON:0003056!1.17e-07!61;UBERON:0001893!1.61e-07!34;UBERON:0000064!1.84e-07!219;UBERON:0000922!2.09e-07!612;UBERON:0002020!2.14e-07!34;UBERON:0003528!2.14e-07!34;UBERON:0001869!2.82e-07!32;UBERON:0002791!3.61e-07!33;UBERON:0002050!3.73e-07!605;UBERON:0005423!3.73e-07!605;UBERON:0000923!6.69e-07!604;UBERON:0005291!6.69e-07!604;UBERON:0006598!6.69e-07!604;UBERON:0002532!6.69e-07!604;UBERON:0000025!8.18e-07!194 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.55e-22,114;UBERON:0004121,2.00e-15,171;UBERON:0000924,2.00e-15,171;UBERON:0006601,2.00e-15,171;UBERON:0011216,6.04e-14,223;UBERON:0001016,1.09e-13,89;UBERON:0001017,5.15e-13,81;UBERON:0002346,8.91e-13,86;UBERON:0003075,1.02e-11,82;UBERON:0007284,1.02e-11,82;UBERON:0000955,2.00e-11,68;UBERON:0006238,2.00e-11,68;UBERON:0010314,2.66e-11,132;UBERON:0001049,3.12e-11,56;UBERON:0005068,3.12e-11,56;UBERON:0006241,3.12e-11,56;UBERON:0007135,3.12e-11,56;UBERON:0000073,4.03e-10,53;UBERON:0002616,4.03e-10,53;UBERON:0004111,7.98e-10,240;UBERON:0000119,3.19e-09,309;UBERON:0000483,3.28e-09,306;UBERON:0010371,3.68e-09,104;UBERON:0002780,6.08e-08,41;UBERON:0001890,6.08e-08,41;UBERON:0003080,6.08e-08,41;UBERON:0006240,6.08e-08,41;UBERON:0003056,7.36e-08,61;UBERON:0001893,1.58e-07,34;UBERON:0003528,2.10e-07,34;UBERON:0002020,2.10e-07,34;UBERON:0001869,2.77e-07,32;UBERON:0002791,8.29e-07,32 | |||
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| ||
|short_description=p2@ARHGEF12 | |short_description=p2@ARHGEF12 | ||
}} | }} |
Latest revision as of 05:18, 16 September 2015
Short description: | p2@ARHGEF12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ARHGEF12_5end |
Coexpression cluster: | NA |
Association with transcript: | -152bp_to_BX648515_5end |
EntrezGene: | ARHGEF12 |
HGNC: | 14193 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 6.55e-22 | 114 |
ectoderm-derived structure | 2.00e-15 | 171 |
ectoderm | 2.00e-15 | 171 |
presumptive ectoderm | 2.00e-15 | 171 |
organ system subdivision | 6.04e-14 | 223 |
nervous system | 1.09e-13 | 89 |
central nervous system | 5.15e-13 | 81 |
neurectoderm | 8.91e-13 | 86 |
neural plate | 1.02e-11 | 82 |
presumptive neural plate | 1.02e-11 | 82 |
brain | 2.00e-11 | 68 |
future brain | 2.00e-11 | 68 |
structure with developmental contribution from neural crest | 2.66e-11 | 132 |
neural tube | 3.12e-11 | 56 |
neural rod | 3.12e-11 | 56 |
future spinal cord | 3.12e-11 | 56 |
neural keel | 3.12e-11 | 56 |
regional part of nervous system | 4.03e-10 | 53 |
regional part of brain | 4.03e-10 | 53 |
anatomical conduit | 7.98e-10 | 240 |
cell layer | 3.19e-09 | 309 |
epithelium | 3.28e-09 | 306 |
ecto-epithelium | 3.68e-09 | 104 |
regional part of forebrain | 6.08e-08 | 41 |
forebrain | 6.08e-08 | 41 |
anterior neural tube | 6.08e-08 | 41 |
future forebrain | 6.08e-08 | 41 |
pre-chordal neural plate | 7.36e-08 | 61 |
telencephalon | 1.58e-07 | 34 |
brain grey matter | 2.10e-07 | 34 |
gray matter | 2.10e-07 | 34 |
cerebral hemisphere | 2.77e-07 | 32 |
regional part of telencephalon | 8.29e-07 | 32 |