FFCP PHASE1:Hg19::chr10:112404070..112404099,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:112404070..112404099,+
|short_description=p2@RBM20
|description=CAGE_peak_2_at_RBM20_5end
|association_with_transcript=-55bp_to_ENST00000369519,ENST000005...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=282996 | |EntrezGene=282996 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27424 | |HGNC=27424 | ||
|UniProt=Q5T481, | |TSSclassifier=strong | ||
|UniProt=Q5T481,F5GXH8 | |||
|association_with_transcript=-55bp_to_ENST00000369519,ENST00000539821,NM_001134363,uc001kzf.2_5end | |||
|cluster_id=chr10:112404070..112404099,+ | |||
|coexpression_cluster_id=C1104 | |||
|description=CAGE_peak_2_at_RBM20_5end | |||
|id=chr10:112404070..112404099,+ | |||
|ontology_enrichment_celltype=CL:0002319!2.08e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000243;4.21e-07;15!CL:0000125;4.21e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,4.49e-07,15;CL:0000125,4.49e-07,15;CL:0000030,4.49e-07,15;CL:0000339,4.49e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006238;3.74e-07;10!CL:0000339;4.21e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;2.15e-08;4!DOID:0050615;3.46e-08;16!DOID:3905;3.08e-07;9!DOID:1325;4.61e-07;7!DOID:3904;4.61e-07;7!DOID:3095;7.37e-07;22!DOID:2994;7.37e-07;22!DOID:1324;7.82e-07;15 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,2.30e-08,4;DOID:0050615,3.28e-08,16;DOID:3905,3.33e-07,9;DOID:1325,5.08e-07,7;DOID:3904,5.08e-07,7;DOID:3095,6.13e-07,22;DOID:2994,6.13e-07,22;DOID:1324,7.43e-07,15 | |||
|ontology_enrichment_uberon=UBERON:0000073!6.56e-20!94;UBERON:0001016!6.56e-20!94;UBERON:0001017!2.68e-19!82;UBERON:0005743!3.70e-19!86;UBERON:0007023!2.76e-17!115;UBERON:0000955!1.11e-15!69;UBERON:0006238!1.11e-15!69;UBERON:0002346!2.84e-14!90;UBERON:0003075!3.91e-14!86;UBERON:0007284!3.91e-14!86;UBERON:0001049!1.30e-12!57;UBERON:0005068!1.30e-12!57;UBERON:0006241!1.30e-12!57;UBERON:0007135!1.30e-12!57;UBERON:0002616!4.91e-12!59;UBERON:0000924!5.38e-11!173;UBERON:0006601!5.38e-11!173;UBERON:0004121!9.65e-11!169;UBERON:0003056!1.26e-10!61;UBERON:0000153!7.02e-10!129;UBERON:0007811!7.02e-10!129;UBERON:0003080!7.66e-10!42;UBERON:0000033!9.38e-10!123;UBERON:0002780!1.82e-09!41;UBERON:0001890!1.82e-09!41;UBERON:0006240!1.82e-09!41;UBERON:0000119!5.59e-09!312;UBERON:0000483!2.49e-08!309;UBERON:0000475!3.11e-08!365;UBERON:0000481!4.50e-08!347;UBERON:0002020!2.65e-07!34;UBERON:0003528!2.65e-07!34;UBERON:0001893!2.92e-07!34;UBERON:0002791!5.48e-07!33;UBERON:0001869!8.01e-07!32 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.369363174230364,0.204000691244253,0,2.28988789704845,1.09499540058307,5.14724822338691,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0,0,0,0.945348171640679,0.443458794925128,0.790513071238134,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0.402829317109147,0,1.46437234528902,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0.286836620748814,0,0.560677600142307,0,0.49333509683432,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0.206105058476878,0.772921620136887,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0.609868530647977,0.265059536642971,1.16193942869518,0.932949495138334,0.504641701751257,0.72995471815166,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,1.47008711385542,0,0,1.18157981336281,0,0,0.171567810298526,0,0,0,0.185176890317059,0,0,1.44331342025273,1.97081688457631,0.352226082707465,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,1.12131084345361,2.1798003441664,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0.537182889719687,0,0,0,0,0.254094624222463,1.30139853857622,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76221041716467,1.02943027143257,0,0.215714200818617,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0.114814448164607,0,0.262248829918848,0.451199612907412,0.693138033939733,0.784349769176855,0,0.527758144464379,0,0.680374821106063,0,0,0.541892875087706,1.00337954770971,0,0,0,0,0,0.512900250232778,0,0,0.206082023295445,5.86044574837398,4.62053199555293,0,0,1.6068392984416,0.096670718292122,0,0.15350367472613,0.827019434907183,0.107420244868274,0.145016693914229,0.426133137080504,0.623224249527161,0,0,0,0,0,0,0,0,0,0,0.74129687641568,1.14499909393593,1.116475108079,2.53103539774981,0.38126038784765,0,0,0,0,0,0.54907405947211,0.589062011728432,0,0,0,2.43816869544795,0,0,0.272999822815972,0.141405431953713,0,0,0,0,0.578775534266688,0,0.202910376962704,0,0.281695602532241,0.286822704408103,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.961416640147258,0,0.490080431962063,3.15865397713722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,1.17206543417515,2.6699314784893,0,5.11445064251544,0,0,0,0,0.140669416410513,0.333926115068718,0,0,8.36841550654493,0.276283915531148,0,5.82931490262282,0,0,0,0,0,1.28236427328014,0,0,1.93866549219044,0.278304294485554,0,0,0,0.724999575434793,1.93448862085349,0,0,3.79217710565611,5.83209226766509,0,0,0.964771509003264,0,0.331737779793674,0.295547618953547,1.09692698576986,0.32681539055697,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,3.60953056987489,6.66612616680314,4.86682602229944,2.84630599086278,0,0.421996129056054,0,0,9.52110014865201,3.98104772431402,1.68069372556344,1.22206028986725,0,0.247127877893006,0.208843899010911,0.606610196826093,0.802577647298789,0.937057782901357,0,0.782658475728359,0.242780379534093,0,0,0,1.45329133145522,3.45743864653333,3.42171031610916,0,0.330991955875499,0.941798755221676,1.19472429772959,0,0,0,0,0.0870592065804026,1.04836000945218,0.51595809741485,0,0,0,1.55182426381471,0.353024506766001,0.451961481561065,0.274083849293502,1.19228767021794,0.759729551470544,0,0.320635281006135,1.49417096317547,0,0,7.90302513544818,0,0,3.35481846026668,0,0.543616824294456,0,2.65195365854437,1.15580235960608,0.600420288709789,0.136905378891993,0,0,0,6.42349522926185,9.62473780849071,0,4.3929380109778,5.57993862577542,3.34757186162809,14.1085292222125,0.360299883542404,2.32991899054908,0,0,0,0.984274815147488,0,0,0.272406812223151,0.482259445395058,0.275078873194468,0.415440338029185,0,0,0.850493793212345,0,0.630445658393585,2.15063811353492,0,1.25501137532991,0,3.57347663186684,2.64836788146173,0,0,0,0,1.19730191562487,0,0.511164065356265,0.226624183040251,0,0,0.646414781807753,0.52893040697076,5.13260513652988,0,0,0.943225830597996,0,0,0,0,0,1.08803560673895,0,0.306345576763462,0.655745261419609,24.1863308225361,0,0.976210119215705,1.001527445652,0.573409195690071,0.221858103073705,0.745156835296601,13.9732121285593,1.62474530350739,0.303298235083296,1.14186133417987,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0.400027764663154,0,0,10.0947918582921,0,0,0,0,0,0,0,0,0,0.353378291891762,0,0,0.256241518587947,1.38172136692479,0,0.967809053062115,0,0,0,0.327609848846413,0,1.47918486351039,0.999936979274649,0,0,3.40509572140102,0.184105950251841,0,0,0.255788742607303,7.76338642056109,0.15726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| 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| ||
|short_description=p2@RBM20 | |||
}} | }} |
Latest revision as of 09:00, 16 September 2015
Short description: | p2@RBM20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RBM20_5end |
Coexpression cluster: | C1104_heart_maxillary_teratocarcinoma_left_neuroblastoma_small_medulloblastoma |
Association with transcript: | -55bp_to_ENST00000369519, ENST00000539821, NM_001134363, uc001kzf.2_5end |
EntrezGene: | RBM20 |
HGNC: | 27424 |
UniProt: | Q5T481F5GXH8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 4.49e-07 | 15 |
glial cell | 4.49e-07 | 15 |
glioblast | 4.49e-07 | 15 |
glioblast (sensu Vertebrata) | 4.49e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 2.30e-08 | 4 |
respiratory system cancer | 3.28e-08 | 16 |
lung carcinoma | 3.33e-07 | 9 |
bronchus cancer | 5.08e-07 | 7 |
bronchogenic carcinoma | 5.08e-07 | 7 |
germ cell and embryonal cancer | 6.13e-07 | 22 |
germ cell cancer | 6.13e-07 | 22 |
lung cancer | 7.43e-07 | 15 |