FFCP PHASE1:Hg19::chr11:118401706..118401732,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84866 | |EntrezGene=84866 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25890 | |HGNC=25890 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-23bp_to_ENST00000411589_5end | |association_with_transcript=-23bp_to_ENST00000411589_5end | ||
|cluster_id=chr11:118401706..118401732,+ | |||
|description=CAGE_peak_3_at_TMEM25_5end | |description=CAGE_peak_3_at_TMEM25_5end | ||
|id=chr11:118401706..118401732,+ | |id=chr11:118401706..118401732,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000188;4.88e-16;9!CL:0002553;7.34e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,5.40e-16,9;CL:0002553,4.25e-07,1;CL:0000187,6.77e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!1.27e-12!312;UBERON:0000483!1.85e-12!309;UBERON:0000481!4.61e-12!347;UBERON:0000475!2.08e-11!365;UBERON:0000477!8.05e-11!286;UBERON:0000467!1.42e-10!625;UBERON:0000480!1.94e-10!626;UBERON:0000468!4.65e-10!659;UBERON:0007023!9.30e-10!115;UBERON:0004111!2.78e-09!241;UBERON:0000064!1.05e-07!219;UBERON:0005743!1.11e-07!86;UBERON:0000923!1.72e-07!604;UBERON:0005291!1.72e-07!604;UBERON:0006598!1.72e-07!604;UBERON:0002532!1.72e-07!604;UBERON:0000922!1.87e-07!612;UBERON:0001017!1.88e-07!82;UBERON:0000073!2.03e-07!94;UBERON:0001016!2.03e-07!94;UBERON:0002050!2.24e-07!605;UBERON:0005423!2.24e-07!605;UBERON:0001049!2.81e-07!57;UBERON:0005068!2.81e-07!57;UBERON:0006241!2.81e-07!57;UBERON:0007135!2.81e-07!57;UBERON:0003075!3.76e-07!86;UBERON:0007284!3.76e-07!86;UBERON:0002346!4.85e-07!90;UBERON:0000025!4.93e-07!194;UBERON:0000955!9.62e-07!69;UBERON:0006238!9.62e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;4.59e-09;20!UBERON:0001134;6.58e-09;16!UBERON:0002036;6.58e-09;16!UBERON:0000200;7.27e-09;6!UBERON:0001869;7.52e-09;32!UBERON:0001017;1.95e-08;75!UBERON:0002619;3.16e-08;22!UBERON:0001893;3.70e-08;34!UBERON:0000956;3.28e-07;25!UBERON:0000203;3.28e-07;25!UBERON:0002581;7.34e-07;1!UBERON:0002902;7.34e-07;1!UBERON:0001882;7.34e-07;1!UBERON:0002022;7.34e-07;1!UBERON:0009899;7.34e-07;1!UBERON:0007190;7.34e-07;1!UBERON:0005403;7.34e-07;1!UBERON:0002791;9.94e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.08e-12,81;UBERON:0001016,2.05e-10,89;UBERON:0001869,1.86e-09,32;UBERON:0000955,4.53e-09,68;UBERON:0006238,4.53e-09,68;UBERON:0001950,7.14e-09,20;UBERON:0001893,7.53e-09,34;UBERON:0000200,9.20e-09,6;UBERON:0002619,4.71e-08,22;UBERON:0001049,6.42e-08,56;UBERON:0005068,6.42e-08,56;UBERON:0006241,6.42e-08,56;UBERON:0007135,6.42e-08,56;UBERON:0002791,3.02e-07,32;UBERON:0002780,3.49e-07,41;UBERON:0001890,3.49e-07,41;UBERON:0003080,3.49e-07,41;UBERON:0006240,3.49e-07,41;UBERON:0002385,4.28e-07,64;UBERON:0001015,4.28e-07,64;UBERON:0000383,4.28e-07,64;UBERON:0000956,4.64e-07,25;UBERON:0000203,4.64e-07,25;UBERON:0007190,4.78e-07,1;UBERON:0002902,5.06e-07,1;UBERON:0009899,5.06e-07,1;UBERON:0002581,8.49e-07,1;UBERON:0000073,8.75e-07,53;UBERON:0002616,8.75e-07,53;UBERON:0003528,8.77e-07,34;UBERON:0002020,8.77e-07,34 | |||
|phase1_expression=0,0,0,2.00146596706261,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0.527533956456907,0.123766352960047,0,0.672325146451775,0,0,0,0.123121058076788,0.408001382488506,0,0,0.136874425072884,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0.6024118375565,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0.50133791063589,0.579386075843295,0,0,0,0,0.087834785693126,0.392937226493138,1.09288586487763,0.741568885568859,0,0,0.132957960518865,0,0,0,0,0,0.347140501607594,0,0.838998872419812,0.550236083880135,0,0.775250277507987,0.35576626268671,0.66944122552934,0,0,0.24406205754817,0,0,0.0892997282840798,0,0.225222960966644,0,0,0,0,0,0.436094052142534,0,0.25326102332916,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0,0.163461903113459,0.302714855289863,0,0.468642863667593,0.312160076830321,0,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0.247266929278557,0.910161361938026,0,0.168336113954066,0.125118519871964,0.831192346452549,0,0.30648779579902,0.150238058906597,0,0.538168907066586,0.85422955527427,0.211931901159562,0,0.206105058476878,0,0.18611685633159,0,0.194874010322397,0,0.0920498986422993,0.161646056818812,1.06502877754984,0.10075209822764,0,0.386521706326594,0.818238361772504,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.354920400119532,0,0,0.220587945464788,0.217879444092406,0.474541238222193,0.134831308160164,0,0.38474715694639,0.738155454624648,0,0.8231480226628,2.94017422771084,0,0,0,0,0.491953754172454,0.343135620597051,0.109750285408626,0,0,0.185176890317059,0,0,0,0,0.469634776943287,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.1466765716419,0,0,0,0,1.04007436911366,0.257207374262142,0,0,0.428933980974443,0,0,0,0,0,0.602878754119172,0,0.599837947092342,0,0,0,0.479249710983165,0,0,0,0.205476322550383,0.179060963239896,0,0,0.215627574859517,0,1.01637849688985,0,0,0.335032530668698,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0.178428988797162,0.630809660135739,0.585707074963566,0,2.27407504055985,0,0,0,0.347534457872331,0,2.74514739048685,0,0,0.213455115606889,0,0,0,0.744323423456331,0.153461973288062,0,0,0.511707249066704,0.321707842287215,0,0.154209693802656,0.177561725313127,0,0,0,0.120859449591622,0,0.0920809889358963,0.229628896329213,0,0.131124414959424,0,0.15403067420883,0,0,0,0,0.340187410553031,0.215915916102139,0,0.270946437543853,1.00337954770971,0.509752546090077,0,0,0,0,0,0.984043937099117,0,0.309123034943167,0,0.082509499920588,0,0,0,1.16004861950546,0.770243085573222,1.22802939780904,4.68644346447404,0.107420244868274,0.290033387828457,3.32383846922794,4.45160178233687,0.330569830721956,0,0.382838137483752,0.10115778085555,0.464845549297286,0.62962469366128,0,0.308033580176089,0.532306030317022,0,0,0,0,1.2655176988749,0,1.27948895655667,0,0,0,0.719489830333259,0,0,0.202182481573316,0,0,0.975267478179181,0.243713489631284,1.05650146756755,0.136499911407986,0.282810863907425,0,0.551365343546124,0,0.876901770507525,1.73632660280006,0,0.202910376962704,0.30982349809975,0,0.286822704408103,0.0982490410131212,0.35667105148125,0,0.422215270595328,0,0,0.699869440489966,0.288666338176536,0.670302275535787,0,0.0941438007767792,0.43050537267123,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0,0.293016358543788,0,0,0,0.47748896947538,0.296964680832639,0,0,0.844016498463076,0.222617410045812,0,0,0.597743964753209,0.276283915531148,0.755798243562828,0,0,0,0.359473404589307,0,0,0.197286811273867,0,0,1.93866549219044,0.927680981618513,1.99613798001194,0,0.699679999969566,0,0.1137934482855,0.508507300585533,0.709163045303809,0,0,0,0,0.241192877250816,1.52581736317083,0.110579259931225,0.295547618953547,1.31631238292384,0,0,0,0,0,0,0,0,0.549585560411174,0.533034776018635,0,0,0,0,0,0,0,0.158936578980379,0.421996129056054,0,0.141353071433941,0,0,0.973033209536731,0.611030144933625,0,0,0.208843899010911,0.202203398942031,0,0,0,0.782658475728359,0,0.394584402849391,0,0.30607276163049,0.189559738885464,0,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0,0.261177619741208,0.17472666824203,0,0,0,0,0.0969890164884194,0.176512253383001,0.451961481561065,0,0,0.886351143382302,0.586654148204409,0,0.213452994739353,0,0.144090417154106,0.114536596165916,0,0,0,0,0,0,0.101998217636322,0,0.600420288709789,0,0,0,0,0.279282401272254,0.229160424011684,0,0.199679000498991,0,0.223171457441873,0.268733889946905,0.720599767084807,0,0.157566364614447,0,0,0.0984274815147488,0.0846733320657845,0,0.136203406111576,0,0,0,0,0,1.03274246318642,0,0.236417121897595,0.262272940674991,0.105600336519406,0,0.191915197319445,0,0,0.25426853765475,0.542999601753713,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| ||
|short_description=p3@TMEM25 | |short_description=p3@TMEM25 | ||
}} | }} |
Latest revision as of 00:27, 16 September 2015
Short description: | p3@TMEM25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TMEM25_5end |
Coexpression cluster: | NA |
Association with transcript: | -23bp_to_ENST00000411589_5end |
EntrezGene: | TMEM25 |
HGNC: | 25890 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 5.40e-16 | 9 |
lung fibroblast | 4.25e-07 | 1 |
muscle cell | 6.77e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 7.08e-12 | 81 |
nervous system | 2.05e-10 | 89 |
cerebral hemisphere | 1.86e-09 | 32 |
brain | 4.53e-09 | 68 |
future brain | 4.53e-09 | 68 |
neocortex | 7.14e-09 | 20 |
telencephalon | 7.53e-09 | 34 |
gyrus | 9.20e-09 | 6 |
regional part of cerebral cortex | 4.71e-08 | 22 |
neural tube | 6.42e-08 | 56 |
neural rod | 6.42e-08 | 56 |
future spinal cord | 6.42e-08 | 56 |
neural keel | 6.42e-08 | 56 |
regional part of telencephalon | 3.02e-07 | 32 |
regional part of forebrain | 3.49e-07 | 41 |
forebrain | 3.49e-07 | 41 |
anterior neural tube | 3.49e-07 | 41 |
future forebrain | 3.49e-07 | 41 |
muscle tissue | 4.28e-07 | 64 |
musculature | 4.28e-07 | 64 |
musculature of body | 4.28e-07 | 64 |
cerebral cortex | 4.64e-07 | 25 |
pallium | 4.64e-07 | 25 |
paracentral gyrus | 4.78e-07 | 1 |
occipital pole | 5.06e-07 | 1 |
pole of cerebral hemisphere | 5.06e-07 | 1 |
postcentral gyrus | 8.49e-07 | 1 |
regional part of nervous system | 8.75e-07 | 53 |
regional part of brain | 8.75e-07 | 53 |
brain grey matter | 8.77e-07 | 34 |
gray matter | 8.77e-07 | 34 |