FFCP PHASE1:Hg19::chr10:104953009..104953061,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:104953009..104953061,-
|short_description=p1@NT5C2
|description=CAGE_peak_1_at_NT5C2_5end
|association_with_transcript=0bp_to_ENST00000343289,ENST00000369...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22978 | |EntrezGene=22978 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8022 | |HGNC=8022 | ||
|UniProt=P49902, | |TSSclassifier=strong | ||
|UniProt=P49902,E9PHF2,Q5JUV4 | |||
|association_with_transcript=0bp_to_ENST00000343289,ENST00000369853,ENST00000369857,ENST00000452156,ENST00000461461,ENST00000470299,uc001kwo.2,uc001kwp.2,uc001kwq.2_5end | |||
|cluster_id=chr10:104953009..104953061,- | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_NT5C2_5end | |||
|id=chr10:104953009..104953061,- | |||
|ontology_enrichment_celltype=CL:0000766!6.63e-26!76;CL:0002057!3.06e-25!42;CL:0000557!3.23e-22!71;CL:0000860!1.91e-21!45;CL:0000839!2.64e-21!70;CL:0002194!1.75e-20!63;CL:0000576!1.75e-20!63;CL:0000040!1.75e-20!63;CL:0000559!1.75e-20!63;CL:0000763!2.75e-20!112;CL:0000049!2.75e-20!112;CL:0002009!3.40e-20!65;CL:0000738!1.15e-15!140;CL:0000037!1.20e-14!172;CL:0000566!1.20e-14!172;CL:0002032!2.79e-13!165;CL:0000837!2.79e-13!165;CL:0000988!3.19e-12!182;CL:0002031!1.72e-11!124;CL:0002087!2.91e-11!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.06e-19;33!CL:0002057;3.06e-19;33!CL:0000473;5.02e-16;39!CL:0000234;5.02e-16;39!CL:0000576;5.71e-16;48!CL:0000766;9.14e-13;69!CL:0000763;2.16e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.63e-29,72;CL:0000557,2.75e-25,67;CL:0000860,3.06e-25,42;CL:0002057,3.06e-25,42;CL:0000473,5.58e-25,48;CL:0000234,5.58e-25,48;CL:0000839,2.58e-24,66;CL:0002194,1.20e-23,59;CL:0000576,1.20e-23,59;CL:0000040,1.20e-23,59;CL:0000559,1.20e-23,59;CL:0002009,2.97e-23,61;CL:0000763,2.26e-22,108;CL:0000049,2.26e-22,108;CL:0000738,3.53e-17,136;CL:0000037,6.31e-16,168;CL:0002032,1.64e-14,161;CL:0000837,1.64e-14,161;CL:0000988,1.14e-13,177;CL:0002031,8.08e-13,120;CL:0002087,1.32e-12,115 | |||
|ontology_enrichment_development_v019=CL:0002057;3.08e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.31e-22!102;UBERON:0003061!1.31e-22!102;UBERON:0002193!1.76e-20!112;UBERON:0002371!5.27e-18!80;UBERON:0004765!3.76e-17!101;UBERON:0001434!3.76e-17!101;UBERON:0001474!3.10e-16!86;UBERON:0002405!9.40e-14!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.25e-25,98;UBERON:0003061,5.25e-25,98;UBERON:0002193,1.40e-22,108;UBERON:0002371,1.99e-20,76;UBERON:0004765,7.74e-20,90;UBERON:0001434,3.32e-19,100;UBERON:0002405,6.92e-19,93;UBERON:0001474,2.24e-18,82 | |||
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| ||
|short_description=p1@NT5C2 | |||
}} | }} |
Latest revision as of 03:02, 16 September 2015
Short description: | p1@NT5C2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NT5C2_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000343289, ENST00000369853, ENST00000369857, ENST00000452156, ENST00000461461, ENST00000470299, uc001kwo.2, uc001kwp.2, uc001kwq.2_5end |
EntrezGene: | NT5C2 |
HGNC: | 8022 |
UniProt: | P49902E9PHF2Q5JUV4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.63e-29 | 72 |
granulocyte monocyte progenitor cell | 2.75e-25 | 67 |
classical monocyte | 3.06e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.06e-25 | 42 |
defensive cell | 5.58e-25 | 48 |
phagocyte | 5.58e-25 | 48 |
myeloid lineage restricted progenitor cell | 2.58e-24 | 66 |
monopoietic cell | 1.20e-23 | 59 |
monocyte | 1.20e-23 | 59 |
monoblast | 1.20e-23 | 59 |
promonocyte | 1.20e-23 | 59 |
macrophage dendritic cell progenitor | 2.97e-23 | 61 |
myeloid cell | 2.26e-22 | 108 |
common myeloid progenitor | 2.26e-22 | 108 |
leukocyte | 3.53e-17 | 136 |
hematopoietic stem cell | 6.31e-16 | 168 |
hematopoietic oligopotent progenitor cell | 1.64e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.64e-14 | 161 |
hematopoietic cell | 1.14e-13 | 177 |
hematopoietic lineage restricted progenitor cell | 8.08e-13 | 120 |
nongranular leukocyte | 1.32e-12 | 115 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.25e-25 | 98 |
blood island | 5.25e-25 | 98 |
hemolymphoid system | 1.40e-22 | 108 |
bone marrow | 1.99e-20 | 76 |
skeletal element | 7.74e-20 | 90 |
skeletal system | 3.32e-19 | 100 |
immune system | 6.92e-19 | 93 |
bone element | 2.24e-18 | 82 |