FFCP PHASE1:Hg19::chr10:104614008..104614042,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:104614008..104614042,+
|short_description=p1@C10orf32
|description=CAGE_peak_1_at_C10orf32_5end
|association_with_transcript=0bp_to_ENST00000299353,ENST00...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=119032 | |EntrezGene=119032 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23516 | |HGNC=23516 | ||
|TSSclassifier=strong | |||
|UniProt=Q96B45 | |UniProt=Q96B45 | ||
|association_with_transcript=0bp_to_ENST00000299353,ENST00000369883_5end | |||
|cluster_id=chr10:104614008..104614042,+ | |||
|description=CAGE_peak_1_at_C10orf32_5end | |||
|id=chr10:104614008..104614042,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.21e-25!42;CL:0000860!5.54e-23!45;CL:0000766!1.16e-21!76;CL:0002194!3.99e-20!63;CL:0000576!3.99e-20!63;CL:0000040!3.99e-20!63;CL:0000559!3.99e-20!63;CL:0000839!3.53e-19!70;CL:0002009!4.65e-19!65;CL:0000557!2.55e-18!71;CL:0000738!8.26e-14!140;CL:0002087!2.94e-13!119;CL:0002031!2.92e-12!124;CL:0000763!6.05e-10!112;CL:0000049!6.05e-10!112;CL:0000037!1.42e-08!172;CL:0000566!1.42e-08!172;CL:0002032!1.04e-07!165;CL:0000837!1.04e-07!165;CL:0000988!8.50e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.27e-20;33!CL:0002057;4.27e-20;33!CL:0000473;1.35e-16;39!CL:0000234;1.35e-16;39!CL:0000576;2.73e-15;48!CL:0000766;4.35e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.21e-25,42;CL:0002057,1.21e-25,42;CL:0000473,2.35e-25,48;CL:0000234,2.35e-25,48;CL:0000766,5.80e-24,72;CL:0002194,1.21e-22,59;CL:0000576,1.21e-22,59;CL:0000040,1.21e-22,59;CL:0000559,1.21e-22,59;CL:0002009,2.05e-21,61;CL:0000839,2.06e-21,66;CL:0000557,1.88e-20,67;CL:0000738,7.20e-15,136;CL:0002087,2.09e-14,115;CL:0002031,2.56e-13,120;CL:0000763,6.45e-11,108;CL:0000049,6.45e-11,108;CL:0000037,3.06e-09,168;CL:0002032,2.41e-08,161;CL:0000837,2.41e-08,161;CL:0000988,1.61e-07,177;CL:0002320,4.83e-07,361;CL:0000134,9.60e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;1.59e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.96e-18!115;UBERON:0004765!9.98e-16!101;UBERON:0001434!9.98e-16!101;UBERON:0002371!1.16e-15!80;UBERON:0001474!2.40e-14!86;UBERON:0002390!3.31e-14!102;UBERON:0003061!3.31e-14!102;UBERON:0002193!3.54e-13!112;UBERON:0002405!5.69e-13!115;UBERON:0001049!3.55e-11!57;UBERON:0005068!3.55e-11!57;UBERON:0006241!3.55e-11!57;UBERON:0007135!3.55e-11!57;UBERON:0002616!1.46e-10!59;UBERON:0003080!1.64e-10!42;UBERON:0002780!1.84e-10!41;UBERON:0001890!1.84e-10!41;UBERON:0006240!1.84e-10!41;UBERON:0001017!2.37e-08!82;UBERON:0005743!2.43e-08!86;UBERON:0000955!4.05e-08!69;UBERON:0006238!4.05e-08!69;UBERON:0000073!9.59e-08!94;UBERON:0001016!9.59e-08!94;UBERON:0002020!1.04e-07!34;UBERON:0003528!1.04e-07!34;UBERON:0001893!1.04e-07!34;UBERON:0002791!1.86e-07!33;UBERON:0001869!2.26e-07!32;UBERON:0002204!5.49e-07!167;UBERON:0003075!9.57e-07!86;UBERON:0007284!9.57e-07!86;UBERON:0002346!9.91e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;8.58e-08;41!UBERON:0001890;8.58e-08;41!UBERON:0003528;6.81e-07;34!UBERON:0002020;6.81e-07;34!UBERON:0001893;7.06e-07;34!UBERON:0001869;7.14e-07;32!UBERON:0002791;9.49e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.03e-18,114;UBERON:0001434,1.21e-17,100;UBERON:0002371,2.16e-17,76;UBERON:0004765,3.41e-17,90;UBERON:0001474,7.05e-16,82;UBERON:0002390,1.49e-15,98;UBERON:0003061,1.49e-15,98;UBERON:0002405,7.77e-15,93;UBERON:0002193,2.27e-14,108;UBERON:0001049,4.16e-11,56;UBERON:0005068,4.16e-11,56;UBERON:0006241,4.16e-11,56;UBERON:0007135,4.16e-11,56;UBERON:0002780,1.84e-10,41;UBERON:0001890,1.84e-10,41;UBERON:0003080,1.84e-10,41;UBERON:0006240,1.84e-10,41;UBERON:0000073,1.93e-10,53;UBERON:0002616,1.93e-10,53;UBERON:0001017,2.89e-08,81;UBERON:0000955,4.91e-08,68;UBERON:0006238,4.91e-08,68;UBERON:0002204,5.70e-08,167;UBERON:0003528,1.04e-07,34;UBERON:0002020,1.04e-07,34;UBERON:0001893,1.04e-07,34;UBERON:0001016,1.22e-07,89;UBERON:0003075,2.10e-07,82;UBERON:0007284,2.10e-07,82;UBERON:0001869,2.26e-07,32;UBERON:0002346,2.29e-07,86;UBERON:0002791,3.14e-07,32 | |||
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10342152196 | ||
|short_description=p1@C10orf32 | |||
}} | }} |
Latest revision as of 02:37, 16 September 2015
Short description: | p1@C10orf32 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C10orf32_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000299353, ENST00000369883_5end |
EntrezGene: | C10orf32 |
HGNC: | 23516 |
UniProt: | Q96B45 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.21e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.21e-25 | 42 |
defensive cell | 2.35e-25 | 48 |
phagocyte | 2.35e-25 | 48 |
myeloid leukocyte | 5.80e-24 | 72 |
monopoietic cell | 1.21e-22 | 59 |
monocyte | 1.21e-22 | 59 |
monoblast | 1.21e-22 | 59 |
promonocyte | 1.21e-22 | 59 |
macrophage dendritic cell progenitor | 2.05e-21 | 61 |
myeloid lineage restricted progenitor cell | 2.06e-21 | 66 |
granulocyte monocyte progenitor cell | 1.88e-20 | 67 |
leukocyte | 7.20e-15 | 136 |
nongranular leukocyte | 2.09e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 2.56e-13 | 120 |
myeloid cell | 6.45e-11 | 108 |
common myeloid progenitor | 6.45e-11 | 108 |
hematopoietic stem cell | 3.06e-09 | 168 |
hematopoietic oligopotent progenitor cell | 2.41e-08 | 161 |
hematopoietic multipotent progenitor cell | 2.41e-08 | 161 |
hematopoietic cell | 1.61e-07 | 177 |
connective tissue cell | 4.83e-07 | 361 |
mesenchymal cell | 9.60e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
adult organism | 8.03e-18 | 114 |
skeletal system | 1.21e-17 | 100 |
bone marrow | 2.16e-17 | 76 |
skeletal element | 3.41e-17 | 90 |
bone element | 7.05e-16 | 82 |
hematopoietic system | 1.49e-15 | 98 |
blood island | 1.49e-15 | 98 |
immune system | 7.77e-15 | 93 |
hemolymphoid system | 2.27e-14 | 108 |
neural tube | 4.16e-11 | 56 |
neural rod | 4.16e-11 | 56 |
future spinal cord | 4.16e-11 | 56 |
neural keel | 4.16e-11 | 56 |
regional part of forebrain | 1.84e-10 | 41 |
forebrain | 1.84e-10 | 41 |
anterior neural tube | 1.84e-10 | 41 |
future forebrain | 1.84e-10 | 41 |
regional part of nervous system | 1.93e-10 | 53 |
regional part of brain | 1.93e-10 | 53 |
central nervous system | 2.89e-08 | 81 |
brain | 4.91e-08 | 68 |
future brain | 4.91e-08 | 68 |
musculoskeletal system | 5.70e-08 | 167 |
brain grey matter | 1.04e-07 | 34 |
gray matter | 1.04e-07 | 34 |
telencephalon | 1.04e-07 | 34 |
nervous system | 1.22e-07 | 89 |
neural plate | 2.10e-07 | 82 |
presumptive neural plate | 2.10e-07 | 82 |
cerebral hemisphere | 2.26e-07 | 32 |
neurectoderm | 2.29e-07 | 86 |
regional part of telencephalon | 3.14e-07 | 32 |