FFCP PHASE1:Hg19::chr15:41952591..41952672,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23269 | |EntrezGene=23269 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14010 | |HGNC=14010 | ||
|TSSclassifier=strong | |||
|UniProt=E7ENI0,Q8IWI9,F5H7K2,B9EGR5 | |UniProt=E7ENI0,Q8IWI9,F5H7K2,B9EGR5 | ||
|association_with_transcript=0bp_to_ENST00000219905,ENST00000389936,ENST00000545763,NM_001080541,NM_001164273,uc010ucy.1,uc010ucz.1_5end | |association_with_transcript=0bp_to_ENST00000219905,ENST00000389936,ENST00000545763,NM_001080541,NM_001164273,uc010ucy.1,uc010ucz.1_5end | ||
|cluster_id=chr15:41952591..41952672,+ | |||
|description=CAGE_peak_1_at_MGA_5end | |description=CAGE_peak_1_at_MGA_5end | ||
|id=chr15:41952591..41952672,+ | |id=chr15:41952591..41952672,+ | ||
|ontology_enrichment_celltype=CL:0000037!2.10e-29!172;CL:0000566!2.10e-29!172;CL:0000738!2.66e-28!140;CL:0000988!4.91e-27!182;CL:0002032!5.90e-27!165;CL:0000837!5.90e-27!165;CL:0002031!5.51e-23!124;CL:0002087!3.77e-22!119;CL:0000542!6.66e-17!53;CL:0000051!6.66e-17!53;CL:0000838!7.51e-17!52;CL:0000763!1.76e-11!112;CL:0000049!1.76e-11!112;CL:0000791!2.19e-10!18;CL:0000789!2.19e-10!18;CL:0002420!2.19e-10!18;CL:0002419!2.19e-10!18;CL:0000790!2.19e-10!18;CL:0000766!3.47e-09!76;CL:0000084!6.04e-09!25;CL:0000827!6.04e-09!25;CL:0000557!9.78e-09!71;CL:0000860!5.14e-08!45;CL:0000839!7.13e-08!70;CL:0000625!8.96e-08!11;CL:0000945!9.12e-08!24;CL:0000826!9.12e-08!24;CL:0002057!1.59e-07!42 | |ontology_enrichment_celltype=CL:0000037!2.10e-29!172;CL:0000566!2.10e-29!172;CL:0000738!2.66e-28!140;CL:0000988!4.91e-27!182;CL:0002032!5.90e-27!165;CL:0000837!5.90e-27!165;CL:0002031!5.51e-23!124;CL:0002087!3.77e-22!119;CL:0000542!6.66e-17!53;CL:0000051!6.66e-17!53;CL:0000838!7.51e-17!52;CL:0000763!1.76e-11!112;CL:0000049!1.76e-11!112;CL:0000791!2.19e-10!18;CL:0000789!2.19e-10!18;CL:0002420!2.19e-10!18;CL:0002419!2.19e-10!18;CL:0000790!2.19e-10!18;CL:0000766!3.47e-09!76;CL:0000084!6.04e-09!25;CL:0000827!6.04e-09!25;CL:0000557!9.78e-09!71;CL:0000860!5.14e-08!45;CL:0000839!7.13e-08!70;CL:0000625!8.96e-08!11;CL:0000945!9.12e-08!24;CL:0000826!9.12e-08!24;CL:0002057!1.59e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000542;1.43e-10;53!CL:0000791;2.46e-10;18!CL:0000789;2.46e-10;18!CL:0002419;2.46e-10;18!CL:0000084;5.93e-09;25!CL:0000860;4.88e-08;33!CL:0002057;4.88e-08;33!CL:0000625;8.74e-08;11!CL:0000945;1.01e-07;24!CL:0002087;1.37e-07;104!CL:0000236;2.81e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.93e-29,168;CL:0000738,3.11e-28,136;CL:0000988,1.80e-27,177;CL:0002032,8.22e-27,161;CL:0000837,8.22e-27,161;CL:0002031,6.47e-23,120;CL:0002087,4.36e-22,115;CL:0000542,6.56e-17,53;CL:0000051,6.56e-17,53;CL:0000838,7.40e-17,52;CL:0000763,2.53e-11,108;CL:0000049,2.53e-11,108;CL:0000791,2.19e-10,18;CL:0000789,2.19e-10,18;CL:0002420,2.19e-10,18;CL:0002419,2.19e-10,18;CL:0000790,2.19e-10,18;CL:0000766,4.61e-09,72;CL:0000084,5.95e-09,25;CL:0000827,5.95e-09,25;CL:0000557,1.29e-08,67;CL:0000625,8.96e-08,11;CL:0000945,9.12e-08,24;CL:0000826,9.12e-08,24;CL:0000839,9.66e-08,66;CL:0000860,1.59e-07,42;CL:0002057,1.59e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000051;1.43e-10;53!CL:0000790;2.46e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.78e-11!102;UBERON:0003061!1.78e-11!102;UBERON:0007023!1.21e-10!115;UBERON:0002193!2.30e-10!112;UBERON:0001049!2.33e-09!57;UBERON:0005068!2.33e-09!57;UBERON:0006241!2.33e-09!57;UBERON:0007135!2.33e-09!57;UBERON:0002780!5.77e-09!41;UBERON:0001890!5.77e-09!41;UBERON:0006240!5.77e-09!41;UBERON:0003080!6.90e-09!42;UBERON:0002616!1.97e-07!59;UBERON:0001017!2.72e-07!82;UBERON:0002020!2.76e-07!34;UBERON:0003528!2.76e-07!34;UBERON:0001893!3.20e-07!34;UBERON:0002791!3.77e-07!33;UBERON:0000073!4.02e-07!94;UBERON:0001016!4.02e-07!94;UBERON:0001869!9.85e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.17e-07;41!UBERON:0001890;5.17e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.48e-11,98;UBERON:0003061,2.48e-11,98;UBERON:0007023,2.10e-10,114;UBERON:0002193,3.38e-10,108;UBERON:0001049,2.08e-09,56;UBERON:0005068,2.08e-09,56;UBERON:0006241,2.08e-09,56;UBERON:0007135,2.08e-09,56;UBERON:0002780,5.77e-09,41;UBERON:0001890,5.77e-09,41;UBERON:0003080,5.77e-09,41;UBERON:0006240,5.77e-09,41;UBERON:0000073,7.65e-09,53;UBERON:0002616,7.65e-09,53;UBERON:0001016,6.69e-08,89;UBERON:0003528,2.76e-07,34;UBERON:0002020,2.76e-07,34;UBERON:0001017,2.78e-07,81;UBERON:0001893,3.20e-07,34;UBERON:0002791,5.30e-07,32;UBERON:0002405,6.72e-07,93;UBERON:0001869,9.84e-07,32 | |||
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| ||
|short_description=p1@MGA | |short_description=p1@MGA | ||
}} | }} |
Latest revision as of 15:00, 17 September 2015
Short description: | p1@MGA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MGA_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000219905, ENST00000389936, ENST00000545763, NM_001080541, NM_001164273, uc010ucy.1, uc010ucz.1_5end |
EntrezGene: | MGA |
HGNC: | 14010 |
UniProt: | E7ENI0Q8IWI9F5H7K2B9EGR5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.93e-29 | 168 |
leukocyte | 3.11e-28 | 136 |
hematopoietic cell | 1.80e-27 | 177 |
hematopoietic oligopotent progenitor cell | 8.22e-27 | 161 |
hematopoietic multipotent progenitor cell | 8.22e-27 | 161 |
hematopoietic lineage restricted progenitor cell | 6.47e-23 | 120 |
nongranular leukocyte | 4.36e-22 | 115 |
lymphocyte | 6.56e-17 | 53 |
common lymphoid progenitor | 6.56e-17 | 53 |
lymphoid lineage restricted progenitor cell | 7.40e-17 | 52 |
myeloid cell | 2.53e-11 | 108 |
common myeloid progenitor | 2.53e-11 | 108 |
mature alpha-beta T cell | 2.19e-10 | 18 |
alpha-beta T cell | 2.19e-10 | 18 |
immature T cell | 2.19e-10 | 18 |
mature T cell | 2.19e-10 | 18 |
immature alpha-beta T cell | 2.19e-10 | 18 |
myeloid leukocyte | 4.61e-09 | 72 |
T cell | 5.95e-09 | 25 |
pro-T cell | 5.95e-09 | 25 |
granulocyte monocyte progenitor cell | 1.29e-08 | 67 |
CD8-positive, alpha-beta T cell | 8.96e-08 | 11 |
lymphocyte of B lineage | 9.12e-08 | 24 |
pro-B cell | 9.12e-08 | 24 |
myeloid lineage restricted progenitor cell | 9.66e-08 | 66 |
classical monocyte | 1.59e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.59e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.48e-11 | 98 |
blood island | 2.48e-11 | 98 |
adult organism | 2.10e-10 | 114 |
hemolymphoid system | 3.38e-10 | 108 |
neural tube | 2.08e-09 | 56 |
neural rod | 2.08e-09 | 56 |
future spinal cord | 2.08e-09 | 56 |
neural keel | 2.08e-09 | 56 |
regional part of forebrain | 5.77e-09 | 41 |
forebrain | 5.77e-09 | 41 |
anterior neural tube | 5.77e-09 | 41 |
future forebrain | 5.77e-09 | 41 |
regional part of nervous system | 7.65e-09 | 53 |
regional part of brain | 7.65e-09 | 53 |
nervous system | 6.69e-08 | 89 |
brain grey matter | 2.76e-07 | 34 |
gray matter | 2.76e-07 | 34 |
central nervous system | 2.78e-07 | 81 |
telencephalon | 3.20e-07 | 34 |
regional part of telencephalon | 5.30e-07 | 32 |
immune system | 6.72e-07 | 93 |
cerebral hemisphere | 9.84e-07 | 32 |