FFCP PHASE1:Hg19::chr11:10472223..10472274,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=272 | |EntrezGene=272 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=470 | |HGNC=470 | ||
|TSSclassifier=strong | |||
|UniProt=A0AUX0,E9PLK6,Q01432 | |UniProt=A0AUX0,E9PLK6,Q01432 | ||
|association_with_transcript=0bp_to_ENST00000396554,ENST00000524866,NM_000480,uc001min.1,uc009yfw.1,uc009yfx.1_5end | |association_with_transcript=0bp_to_ENST00000396554,ENST00000524866,NM_000480,uc001min.1,uc009yfw.1,uc009yfx.1_5end | ||
|cluster_id=chr11:10472223..10472274,+ | |||
|description=CAGE_peak_5_at_AMPD3_5end | |description=CAGE_peak_5_at_AMPD3_5end | ||
|id=chr11:10472223..10472274,+ | |id=chr11:10472223..10472274,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.57e-17!140;CL:0002087!1.79e-15!119;CL:0002057!4.11e-14!42;CL:0002031!1.08e-13!124;CL:0000860!6.09e-13!45;CL:0000766!4.58e-12!76;CL:0000037!8.97e-12!172;CL:0000566!8.97e-12!172;CL:0000557!4.74e-11!71;CL:0002194!7.87e-11!63;CL:0000576!7.87e-11!63;CL:0000040!7.87e-11!63;CL:0000559!7.87e-11!63;CL:0002032!1.04e-10!165;CL:0000837!1.04e-10!165;CL:0002009!1.18e-10!65;CL:0000839!3.05e-10!70;CL:0000988!1.15e-09!182;CL:0000763!8.74e-07!112;CL:0000049!8.74e-07!112 | |ontology_enrichment_celltype=CL:0000738!1.57e-17!140;CL:0002087!1.79e-15!119;CL:0002057!4.11e-14!42;CL:0002031!1.08e-13!124;CL:0000860!6.09e-13!45;CL:0000766!4.58e-12!76;CL:0000037!8.97e-12!172;CL:0000566!8.97e-12!172;CL:0000557!4.74e-11!71;CL:0002194!7.87e-11!63;CL:0000576!7.87e-11!63;CL:0000040!7.87e-11!63;CL:0000559!7.87e-11!63;CL:0002032!1.04e-10!165;CL:0000837!1.04e-10!165;CL:0002009!1.18e-10!65;CL:0000839!3.05e-10!70;CL:0000988!1.15e-09!182;CL:0000763!8.74e-07!112;CL:0000049!8.74e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.19e-18;33!CL:0002057;5.19e-18;33!CL:0000473;1.59e-14;39!CL:0000234;1.59e-14;39!CL:0000576;2.77e-10;48!CL:0000236;1.03e-08;13!CL:0000766;3.32e-08;69!CL:0002087;1.76e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.48e-21,136;CL:0002087,2.36e-18,115;CL:0000860,1.38e-16,42;CL:0002057,1.38e-16,42;CL:0000473,4.61e-16,48;CL:0000234,4.61e-16,48;CL:0002031,4.85e-16,120;CL:0000037,8.06e-16,168;CL:0002032,2.09e-14,161;CL:0000837,2.09e-14,161;CL:0000988,3.04e-14,177;CL:0000766,4.78e-14,72;CL:0000557,1.74e-12,67;CL:0002009,3.53e-12,61;CL:0002194,4.01e-12,59;CL:0000576,4.01e-12,59;CL:0000040,4.01e-12,59;CL:0000559,4.01e-12,59;CL:0000839,4.25e-11,66;CL:0000763,4.38e-09,108;CL:0000049,4.38e-09,108;CL:0000236,1.06e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;1.52e-12;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.95e-15!115;UBERON:0002390!2.88e-13!102;UBERON:0003061!2.88e-13!102;UBERON:0002193!9.33e-12!112;UBERON:0002371!1.72e-09!80;UBERON:0001474!2.26e-07!86;UBERON:0004765!4.85e-07!101;UBERON:0001434!4.85e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.45e-17,98;UBERON:0003061,5.45e-17,98;UBERON:0002193,5.11e-15,108;UBERON:0007023,2.93e-12,114;UBERON:0002371,6.95e-11,76;UBERON:0002405,1.36e-10,93;UBERON:0004765,1.96e-09,90;UBERON:0001474,6.28e-09,82;UBERON:0001434,2.22e-07,100 | |||
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|phase1_expression=0.908391896352783,0.214100523890983,0.281908808191942,0,0,0,0,0,0.261185628199839,0.491467873003018,1.39560233594486,5.46103430325431,7.91300934685361,0.74259811776028,1.65698687863958,0,0,0.730310090387373,0.487932798790507,0.369363174230364,0.612002073732759,0,0,0.547497700291537,0.376627918784408,0.458480434487708,1.06730766284929,0.865818594450472,1.57345710739562,0,2.32224184974114,4.59710612239464,1.8072355126695,1.47901604066715,0,0,2.34880351467878,4.43196326825502,4.8130667392834,5.64228263861215,1.34349284543955,2.91504299417082,2.57575567634187,3.63495596948912,7.55751887377619,6.30718559088322,3.25400651667958,6.98985409637104,5.57471467611186,1.1507695692886,3.58624989140741,1.18241114944293,2.06847408441971,5.80936215225443,2.70852973188684,6.02375486536335,5.73102915121476,3.37085226667627,3.67300670845083,4.8139354061414,4.47535988059329,2.63881040149373,3.98927315243264,2.55734850319616,3.48251086354301,8.5107783703671,10.5879782329248,1.50749199154046,4.17186334736161,1.3031330682307,4.23779651843358,6.62899744777616,5.06339819905415,0.211255286311942,0.637812899895131,0.628975936525128,1.57260083605093,1.65194582125657,4.018139667427,0,0.39783335439818,0.547992461293902,5.27988733383968,12.0150494477669,8.00558328477199,12.3751764544287,9.20910770182829,9.77079147922622,11.2377628373427,12.4026988089597,12.5226853204079,8.80855784056408,9.93910393125595,5.28685314316103,2.80254281490768,1.31692042387539,4.32761494250433,3.14408610199332,6.99045096598331,2.34061093546949,5.86660079940463,2.36723902867367,7.79306913631645,0.891283655081389,5.00830042707223,3.98761010250518,2.70803863765016,0.640456598628376,2.08094956095805,2.30213066445147,3.59255023121603,0.869409257205157,4.89345658434799,6.68852070224283,6.27213142829861,1.35971211237079,3.44898444241729,3.09264700934367,5.56643322442906,4.14135038621326,1.95325036156926,0.950452044448374,3.312652619711,4.09557155694139,0,3.55165878066025,0.821127996921047,3.42731463482045,3.20928234940209,3.33096128930438,0,0.670700859703636,0.255725123687061,0.722878304769133,0,1.15877215168659,0,1.94653948121054,0.850813354476611,0.886917589850256,0.702678285545008,0.851363990735132,1.82147644146271,1.48313777113772,0.649094787309367,0.870648686496336,0.930705723632056,0,0.571994910780128,2.22874500797739,0,0,0,0,0,0.275118041940067,0,0,0,0,0.402829317109147,0,0.732186172644509,0,0,0.0892997282840798,0.22452937262617,0.563057402416611,0,0,0.549605231791222,10.5424333948851,7.75560528296651,3.05265836499774,0.993943903390637,0,0.397227542439656,0,0,0.560677600142307,0,0,0.933633106199299,0,0.163461903113459,0,0,0.468642863667593,0.312160076830321,0,0.747243402759005,0.352303495931295,0.323745888736263,0.280901613404497,0.204154171254893,0.737005903870608,0.619954687054593,0,0.494533858557114,0.910161361938026,0.718618141816238,0.168336113954066,0.625592599359821,0.277064115484183,0,0.612975591598039,0.751190294532984,0.113432183160021,1.25572744982203,0.213557388818567,0,0.600182192168805,0.103052529238439,0.515281080091258,0.18611685633159,0.337552664482532,0.0974370051611986,0.504867548488229,0.0920498986422993,0,0.710019185033229,0.10075209822764,0.169560592310488,2.31913023795956,2.72746120590835,3.44165514466805,0.243947412259191,0.397589304964456,0.116193942869518,0.10366105501537,0.756962552626885,0.36497735907583,0,3.85944562915731,1.38134921352481,0.928735856063958,0.721879481669586,1.18306800039844,1.18009283054671,0.241011029883482,1.43382164552112,0.653638332277218,0.949082476444386,1.34831308160164,1.17732879075208,0.38474715694639,0,0,0.4115740113314,0,0,0.982827216677626,0.590789906681404,0,1.47586126251736,0,1.53650399572076,2.24803506515239,2.01057944823262,1.574003567695,0,0,0,1.15930404975077,0.352226082707465,0,0.925971025153221,0,0,0,0.492434012174795,1.17002132569619,1.33768046059855,3.74935335947108,1.6798212819886,1.70130116690864,1.16426079513703,1.74380363108377,1.15014803749563,0.492663237895943,0.088048434013226,1.03664057770386,2.01767934783746,2.01987893482208,0.126995788584338,1.14596527667483,0,0,0,0,0,0.897048674762886,1.30788020649984,0.22001485746285,0.517086863031111,3.57656445851882,0,0.531876233169741,0,1.02882949704857,0,2.1313774321288,0.285955987316295,0,0,0,0,0,0.602878754119172,0,1.19967589418468,0,2.00902836572851,2.10833939483032,0,0,0,0.144781306667579,0.410952645100767,0.358121926479791,0,3.15249216323084,0.862510299438069,3.85029108839245,0.254094624222463,0,0,0,0,4.49404214368309,0,9.53155680902882,0.858840442033979,2.50085260529839,0.271265023699736,1.03985430765404,0.713715955188647,2.52323864054295,1.99140405487612,0.300946099727719,0,1.03473071292505,0,0.553107505625109,0.868836144680828,0.195801157462741,0,4.13536052245775,4.52999821719095,4.05564719653088,3.03127571446259,3.32870879020994,4.83824469327489,0.248107807818777,1.38115775959256,0.280660094433074,0.896974044789907,1.02341449813341,0.804269605718038,0,0.462629081407967,0.177561725313127,0.328508624055237,1.038508858367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| ||
|short_description=p5@AMPD3 | |short_description=p5@AMPD3 | ||
}} | }} |
Latest revision as of 20:18, 24 September 2015
Short description: | p5@AMPD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_AMPD3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000396554, ENST00000524866, NM_000480, uc001min.1, uc009yfw.1, uc009yfx.1_5end |
EntrezGene: | AMPD3 |
HGNC: | 470 |
UniProt: | A0AUX0E9PLK6Q01432 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.48e-21 | 136 |
nongranular leukocyte | 2.36e-18 | 115 |
classical monocyte | 1.38e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.38e-16 | 42 |
defensive cell | 4.61e-16 | 48 |
phagocyte | 4.61e-16 | 48 |
hematopoietic lineage restricted progenitor cell | 4.85e-16 | 120 |
hematopoietic stem cell | 8.06e-16 | 168 |
hematopoietic oligopotent progenitor cell | 2.09e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.09e-14 | 161 |
hematopoietic cell | 3.04e-14 | 177 |
myeloid leukocyte | 4.78e-14 | 72 |
granulocyte monocyte progenitor cell | 1.74e-12 | 67 |
macrophage dendritic cell progenitor | 3.53e-12 | 61 |
monopoietic cell | 4.01e-12 | 59 |
monocyte | 4.01e-12 | 59 |
monoblast | 4.01e-12 | 59 |
promonocyte | 4.01e-12 | 59 |
myeloid lineage restricted progenitor cell | 4.25e-11 | 66 |
myeloid cell | 4.38e-09 | 108 |
common myeloid progenitor | 4.38e-09 | 108 |
B cell | 1.06e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.45e-17 | 98 |
blood island | 5.45e-17 | 98 |
hemolymphoid system | 5.11e-15 | 108 |
adult organism | 2.93e-12 | 114 |
bone marrow | 6.95e-11 | 76 |
immune system | 1.36e-10 | 93 |
skeletal element | 1.96e-09 | 90 |
bone element | 6.28e-09 | 82 |
skeletal system | 2.22e-07 | 100 |