FFCP PHASE1:Hg19::chr11:102826454..102826469,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4322 | |EntrezGene=4322 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7159 | |HGNC=7159 | ||
|TSSclassifier=strong | |||
|UniProt=P45452,A8K846,Q53H33 | |UniProt=P45452,A8K846,Q53H33 | ||
|association_with_transcript=0bp_to_ENST00000260302,NM_002427,uc001phl.2_5end | |association_with_transcript=0bp_to_ENST00000260302,NM_002427,uc001phl.2_5end | ||
|cluster_id=chr11:102826454..102826469,- | |||
|description=CAGE_peak_1_at_MMP13_5end | |description=CAGE_peak_1_at_MMP13_5end | ||
|id=chr11:102826454..102826469,- | |id=chr11:102826454..102826469,- | ||
|ontology_enrichment_celltype=CL:0000062!3.34e-09!11;CL:0000375!3.34e-09!11;CL:0000335!3.34e-09!11;CL:0002076!2.18e-07!43 | |ontology_enrichment_celltype=CL:0000062!3.34e-09!11;CL:0000375!3.34e-09!11;CL:0000335!3.34e-09!11;CL:0002076!2.18e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0000062;6.44e-14;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,1.84e-14,11;CL:0000375,1.84e-14,11;CL:0000335,1.84e-14,11 | |||
|ontology_enrichment_development_v019=CL:0000335;1.81e-14;11 | |||
|ontology_enrichment_disease=DOID:1749!3.96e-10!14;DOID:0050687!1.72e-09!143;DOID:305!5.16e-09!106 | |ontology_enrichment_disease=DOID:1749!3.96e-10!14;DOID:0050687!1.72e-09!143;DOID:305!5.16e-09!106 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.51e-14;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.53e-14,14 | |||
|ontology_enrichment_uberon=UBERON:0000974!3.43e-07!10 | |ontology_enrichment_uberon=UBERON:0000974!3.43e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0003729;4.63e-09;13!UBERON:0000974;1.22e-07;6!UBERON:0004765;1.25e-07;26!UBERON:0000344;3.95e-07;20!UBERON:0003343;5.77e-07;4!UBERON:0004785;5.77e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003729,3.99e-09,13;UBERON:0000344,3.54e-07,20;UBERON:0003343,5.65e-07,4;UBERON:0004785,5.65e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,1.35433163884467,0.204000691244253,0,0,0.273748850145768,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869079113764942,361.059819961199,18.9787599418028,0.567208902984407,0.443458794925128,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0.709336764396714,0,0,10.3600370335207,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,24.9480600029231,1.97813543422845,0,0,0.168336113954066,0.250237039743928,0,0,0,13.3711872426871,0,0.179389635688862,0,0,0.300091096084402,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,1.06502877754984,0.302256294682921,0,1.73934767846967,20.4559590443126,0,0,0,0,0,0,0,6.25798129319264,1.92972281457866,0,0,0,0,0.168584690078102,0,0,0,0,0.269662616320329,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0.858486162094873,0,0,0,17.8094284574876,58.1218163568054,0.567100388969546,0.268675568108545,0,0,0,0,0,0,0,0,0,0,3.4214489204541,0,0,0,0,0,0,0,0,0,0,0,1.54324424557285,0,0.532844358032199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,13.721109708013,3.90419561572865,0,0.167516265334349,0,0,0,0,2.33113834266366,1.50051156317903,0.813795071099207,0,0,0,0,48.151375956435,150.08895267695,4.1389228517002,6.64225598535437,11.799626786669,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0,0,0.519254429183621,0,0.241718899183244,0.200506470303285,0,0,0,0,0,0.15403067420883,0,0,0.211103257785751,0,0,0,0,0.541892875087706,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0.48335359146061,0,0,0,0,0,0,2.8490251406956,0.991709492165869,0.384380134730212,0.510450849978337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.0941438007767792,0,1.68471475667626,0.886860307073351,0.459446800413919,0,0,0,0,0,0,0,0,0,0,5.3908847515827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,2.59022384726391,0.552567831062295,0,0,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0.260427761085233,3.76077999983642,0,57.9208651773193,73.7335585849022,0,0,0,0,0,0,0,0,0,0,0,32.0674611840788,0.461701551022782,16.2937139861212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0.30607276163049,1.32691817219825,27.5091857528521,5.59916233545135,0,0,0,0,0,0,0,12.8370040612835,14.5388874989272,0,0,0,0,0,0,0,0,0.137041924646751,7.55115524471361,0,0.195551382734803,0.320635281006135,0,24.9762011977663,0,0,0,0,0.248505071130865,0,0.407712618220842,0.418411385249333,22.8476007505361,11.8469741859623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0.169346664131569,0,0,0,0,0,0.449947783103001,0,0,1.67717343799633,0.0788057072991982,0,4.8576154798927,0,0.191915197319445,0,0,0,0,0,0,0,0.164185041498678,3.57814845749386,0.226624183040251,0,0,0,0,0,0,6.0868825163586,0.314408610199332,0,0,0,0,40.2154992395215,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,3.12451019905266,0.151649117541648,0,2.82318983637806,0,0,0.447764408660622,0,0,1.7046270474758,2.0125432140206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,1.58694147858591,0,0,0,0,0,0,0,0,0,0,0,0,6.23552988286043,0,2.12635012532597,0.327609848846413,1.2288645437686,0,0,0,0,0,2.76158925377761,0,0,0,0,0,0,0,0.212574920101683,0,0.558644917973244,0,0,0.80057074828547,0,0,0,0,0,0,0,0.0691572524642179,0,0,141.332714641477,297.165733112958,6.42000094825876,0.462102664601353,0.762764190934334,8.28431911272121,18.6981248789298,0,5.84944699240208,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,339.975819948963,0,0,2.42786241694653,0.455324382702595,0,0.230467975111559,0.171488009437418,0,0,0.118193840883968,18.9093383216518,0.39246546425257,0,1.12108865325516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6628395868192,131.837713907336,97.4649717756982,0,0,0,0,0,0,0,0,0,0,0,0,4.37792246343353,0.154348316215889,0,0,0,2.82811856521951,0,0,5.4945244585842,0.169927114687817,0,0.0644578879735772,0,70.1716978720234,0,0,0,0,0,0,0,0,0,8.92788043600203,13.4030932303111,0,0.126166424835079,0,0,0,0,0,0,0.985123076837112,0,0,0,11.301401040752,0.476128862927481,0.387533459016037,0.434523000071005,0,0,0,0,0,0,33.3508255075945,0.332660356546013,7.9775203238755,0.106727345877715,3.8614456457388,0,0,0,0,3.99454064511308,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,1.35433163884467,0.204000691244253,0,0,0.273748850145768,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869079113764942,361.059819961199,18.9787599418028,0.567208902984407,0.443458794925128,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0.709336764396714,0,0,10.3600370335207,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,24.9480600029231,1.97813543422845,0,0,0.168336113954066,0.250237039743928,0,0,0,13.3711872426871,0,0.179389635688862,0,0,0.300091096084402,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,1.06502877754984,0.302256294682921,0,1.73934767846967,20.4559590443126,0,0,0,0,0,0,0,6.25798129319264,1.92972281457866,0,0,0,0,0.168584690078102,0,0,0,0,0.269662616320329,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0.858486162094873,0,0,0,17.8094284574876,58.1218163568054,0.567100388969546,0.268675568108545,0,0,0,0,0,0,0,0,0,0,3.4214489204541,0,0,0,0,0,0,0,0,0,0,0,1.54324424557285,0,0.532844358032199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,13.721109708013,3.90419561572865,0,0.167516265334349,0,0,0,0,2.33113834266366,1.50051156317903,0.813795071099207,0,0,0,0,48.151375956435,150.08895267695,4.1389228517002,6.64225598535437,11.799626786669,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0,0,0.519254429183621,0,0.241718899183244,0.200506470303285,0,0,0,0,0,0.15403067420883,0,0,0.211103257785751,0,0,0,0,0.541892875087706,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0.48335359146061,0,0,0,0,0,0,2.8490251406956,0.991709492165869,0.384380134730212,0.510450849978337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.0941438007767792,0,1.68471475667626,0.886860307073351,0.459446800413919,0,0,0,0,0,0,0,0,0,0,5.3908847515827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,2.59022384726391,0.552567831062295,0,0,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0.260427761085233,3.76077999983642,0,57.9208651773193,73.7335585849022,0,0,0,0,0,0,0,0,0,0,0,32.0674611840788,0.461701551022782,16.2937139861212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0.30607276163049,1.32691817219825,27.5091857528521,5.59916233545135,0,0,0,0,0,0,0,12.8370040612835,14.5388874989272,0,0,0,0,0,0,0,0,0.137041924646751,7.55115524471361,0,0.195551382734803,0.320635281006135,0,24.9762011977663,0,0,0,0,0.248505071130865,0,0.407712618220842,0.418411385249333,22.8476007505361,11.8469741859623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0.169346664131569,0,0,0,0,0,0.449947783103001,0,0,1.67717343799633,0.0788057072991982,0,4.8576154798927,0,0.191915197319445,0,0,0,0,0,0,0,0.164185041498678,3.57814845749386,0.226624183040251,0,0,0,0,0,0,6.0868825163586,0.314408610199332,0,0,0,0,40.2154992395215,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,3.12451019905266,0.151649117541648,0,2.82318983637806,0,0,0.447764408660622,0,0,1.7046270474758,2.0125432140206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,1.58694147858591,0,0,0,0,0,0,0,0,0,0,0,0,6.23552988286043,0,2.12635012532597,0.327609848846413,1.2288645437686,0,0,0,0,0,2.76158925377761,0,0,0,0,0,0,0,0.212574920101683,0,0.558644917973244,0,0,0.80057074828547,0,0,0,0,0,0,0,0.0691572524642179,0,0,141.332714641477,297.165733112958,6.42000094825876,0.462102664601353,0.762764190934334,8.28431911272121,18.6981248789298,0,5.84944699240208,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,339.975819948963,0,0,2.42786241694653,0.455324382702595,0,0.230467975111559,0.171488009437418,0,0,0.118193840883968,18.9093383216518,0.39246546425257,0,1.12108865325516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6628395868192,131.837713907336,97.4649717756982,0,0,0,0,0,0,0,0,0,0,0,0,4.37792246343353,0.154348316215889,0,0,0,2.82811856521951,0,0,5.4945244585842,0.169927114687817,0,0.0644578879735772,0,70.1716978720234,0,0,0,0,0,0,0,0,0,8.92788043600203,13.4030932303111,0,0.126166424835079,0,0,0,0,0,0,0.985123076837112,0,0,0,11.301401040752,0.476128862927481,0.387533459016037,0.434523000071005,0,0,0,0,0,0,33.3508255075945,0.332660356546013,7.9775203238755,0.106727345877715,3.8614456457388,0,0,0,0,3.99454064511308,0.402547587182052,0 | ||
|short_description=p1@MMP13 | |short_description=p1@MMP13 | ||
}} | }} |
Latest revision as of 18:40, 24 September 2015
Short description: | p1@MMP13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MMP13_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000260302, NM_002427, uc001phl.2_5end |
EntrezGene: | MMP13 |
HGNC: | 7159 |
UniProt: | P45452A8K846Q53H33 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 1.84e-14 | 11 |
osteoprogenitor cell | 1.84e-14 | 11 |
mesenchyme condensation cell | 1.84e-14 | 11 |
Ontology term | p-value | n |
---|---|---|
mouth mucosa | 3.99e-09 | 13 |
mucosa | 3.54e-07 | 20 |
mucosa of oral region | 5.65e-07 | 4 |
respiratory system mucosa | 5.65e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.53e-14 | 14 |