FFCP PHASE1:Hg19::chr10:103559060..103559112,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:103559060..103559112,-
|short_description=p4@MGEA5
|description=CAGE_peak_4_at_MGEA5_5end
|association_with_transcript=0bp_to_ENST00000482611_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10724 | |EntrezGene=10724 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7056 | |HGNC=7056 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000482611_5end | |||
|cluster_id=chr10:103559060..103559112,- | |||
|description=CAGE_peak_4_at_MGEA5_5end | |||
|id=chr10:103559060..103559112,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.41e-14!57;UBERON:0005068!7.41e-14!57;UBERON:0006241!7.41e-14!57;UBERON:0007135!7.41e-14!57;UBERON:0002780!7.52e-13!41;UBERON:0001890!7.52e-13!41;UBERON:0006240!7.52e-13!41;UBERON:0002020!5.24e-12!34;UBERON:0003528!5.24e-12!34;UBERON:0003080!6.08e-12!42;UBERON:0007023!3.65e-11!115;UBERON:0001869!1.51e-10!32;UBERON:0001017!1.80e-10!82;UBERON:0002791!1.83e-10!33;UBERON:0001893!2.54e-10!34;UBERON:0002616!2.86e-10!59;UBERON:0005743!1.17e-09!86;UBERON:0002619!2.91e-09!22;UBERON:0002346!3.99e-09!90;UBERON:0000955!9.22e-09!69;UBERON:0006238!9.22e-09!69;UBERON:0000956!1.07e-08!25;UBERON:0000203!1.07e-08!25;UBERON:0003075!1.70e-08!86;UBERON:0007284!1.70e-08!86;UBERON:0001950!4.77e-08!20;UBERON:0000073!5.44e-08!94;UBERON:0001016!5.44e-08!94;UBERON:0003056!6.24e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;2.83e-10;32!UBERON:0003528;3.77e-10;34!UBERON:0002020;3.77e-10;34!UBERON:0002619;4.57e-10;22!UBERON:0001869;1.46e-09;32!UBERON:0002780;1.80e-09;41!UBERON:0001890;1.80e-09;41!UBERON:0000956;6.07e-09;25!UBERON:0000203;6.07e-09;25!UBERON:0001950;1.76e-08;20!UBERON:0000073;2.23e-08;53!UBERON:0002616;2.23e-08;53!UBERON:0001893;2.59e-08;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.27e-15,56;UBERON:0005068,1.27e-15,56;UBERON:0006241,1.27e-15,56;UBERON:0007135,1.27e-15,56;UBERON:0000073,2.64e-14,53;UBERON:0002616,2.64e-14,53;UBERON:0002780,6.39e-13,41;UBERON:0001890,6.39e-13,41;UBERON:0003080,6.39e-13,41;UBERON:0006240,6.39e-13,41;UBERON:0003528,1.01e-12,34;UBERON:0002020,1.01e-12,34;UBERON:0002791,1.84e-11,32;UBERON:0001017,2.37e-11,81;UBERON:0002346,8.62e-11,86;UBERON:0001869,2.07e-10,32;UBERON:0001893,3.02e-10,34;UBERON:0000955,3.56e-10,68;UBERON:0006238,3.56e-10,68;UBERON:0003075,4.43e-10,82;UBERON:0007284,4.43e-10,82;UBERON:0002619,5.73e-10,22;UBERON:0001016,1.36e-09,89;UBERON:0000956,5.47e-09,25;UBERON:0000203,5.47e-09,25;UBERON:0007023,7.35e-09,114;UBERON:0010371,1.35e-08,104;UBERON:0001950,2.11e-08,20;UBERON:0003056,3.91e-07,61 | |||
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| ||
|short_description=p4@MGEA5 | |||
}} | }} |
Latest revision as of 23:30, 15 September 2015
Short description: | p4@MGEA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MGEA5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000482611_5end |
EntrezGene: | MGEA5 |
HGNC: | 7056 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 1.27e-15 | 56 |
neural rod | 1.27e-15 | 56 |
future spinal cord | 1.27e-15 | 56 |
neural keel | 1.27e-15 | 56 |
regional part of nervous system | 2.64e-14 | 53 |
regional part of brain | 2.64e-14 | 53 |
regional part of forebrain | 6.39e-13 | 41 |
forebrain | 6.39e-13 | 41 |
anterior neural tube | 6.39e-13 | 41 |
future forebrain | 6.39e-13 | 41 |
brain grey matter | 1.01e-12 | 34 |
gray matter | 1.01e-12 | 34 |
regional part of telencephalon | 1.84e-11 | 32 |
central nervous system | 2.37e-11 | 81 |
neurectoderm | 8.62e-11 | 86 |
cerebral hemisphere | 2.07e-10 | 32 |
telencephalon | 3.02e-10 | 34 |
brain | 3.56e-10 | 68 |
future brain | 3.56e-10 | 68 |
neural plate | 4.43e-10 | 82 |
presumptive neural plate | 4.43e-10 | 82 |
regional part of cerebral cortex | 5.73e-10 | 22 |
nervous system | 1.36e-09 | 89 |
cerebral cortex | 5.47e-09 | 25 |
pallium | 5.47e-09 | 25 |
adult organism | 7.35e-09 | 114 |
ecto-epithelium | 1.35e-08 | 104 |
neocortex | 2.11e-08 | 20 |
pre-chordal neural plate | 3.91e-07 | 61 |