FFCP PHASE1:Mm9::chr7:107756172..107756206,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=52443 | |EntrezGene=52443 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=788 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-20bp_to_ENSMUST00000127253_5end | |association_with_transcript=-20bp_to_ENSMUST00000127253_5end | ||
|cluster_id=chr7:107756172..107756206,- | |||
|description=CAGE_peak_4_at_Mrpl48_5end | |description=CAGE_peak_4_at_Mrpl48_5end | ||
|id=chr7:107756172..107756206,- | |id=chr7:107756172..107756206,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.21e-07,23;CL:0000337,8.21e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!8.24e-10!63;UBERON:0001049!6.09e-09!52;UBERON:0005068!6.09e-09!52;UBERON:0006241!6.09e-09!52;UBERON:0007135!6.09e-09!52;UBERON:0002346!1.81e-08!71;UBERON:0003075!1.81e-08!71;UBERON:0007284!1.81e-08!71;UBERON:0001017!2.14e-08!73;UBERON:0005743!2.14e-08!73;UBERON:0000955!2.73e-08!50;UBERON:0006238!2.73e-08!50;UBERON:0002616!4.27e-08!49;UBERON:0004121!4.46e-08!102;UBERON:0000924!4.46e-08!102;UBERON:0006601!4.46e-08!102;UBERON:0000073!1.31e-07!75;UBERON:0001016!1.31e-07!75;UBERON:0003056!9.89e-07!49 | |ontology_enrichment_uberon=UBERON:0000033!8.24e-10!63;UBERON:0001049!6.09e-09!52;UBERON:0005068!6.09e-09!52;UBERON:0006241!6.09e-09!52;UBERON:0007135!6.09e-09!52;UBERON:0002346!1.81e-08!71;UBERON:0003075!1.81e-08!71;UBERON:0007284!1.81e-08!71;UBERON:0001017!2.14e-08!73;UBERON:0005743!2.14e-08!73;UBERON:0000955!2.73e-08!50;UBERON:0006238!2.73e-08!50;UBERON:0002616!4.27e-08!49;UBERON:0004121!4.46e-08!102;UBERON:0000924!4.46e-08!102;UBERON:0006601!4.46e-08!102;UBERON:0000073!1.31e-07!75;UBERON:0001016!1.31e-07!75;UBERON:0003056!9.89e-07!49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.91e-12,54;UBERON:0002346,2.46e-11,64;UBERON:0003075,2.46e-11,64;UBERON:0007284,2.46e-11,64;UBERON:0001049,1.09e-10,52;UBERON:0005068,1.09e-10,52;UBERON:0006241,1.09e-10,52;UBERON:0007135,1.09e-10,52;UBERON:0001017,1.69e-09,73;UBERON:0001016,7.71e-09,75;UBERON:0000955,3.80e-08,47;UBERON:0006238,3.80e-08,47;UBERON:0004121,3.97e-08,95;UBERON:0000924,3.97e-08,95;UBERON:0006601,3.97e-08,95;UBERON:0010371,4.24e-08,73;UBERON:0002616,6.59e-08,46;UBERON:0003056,1.15e-07,49;UBERON:0003076,6.73e-07,12;UBERON:0003057,6.73e-07,12 | |||
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| ||
|short_description=p4@Mrpl48 | |short_description=p4@Mrpl48 | ||
}} | }} |
Latest revision as of 14:53, 25 September 2015
Short description: | p4@Mrpl48 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Mrpl48_5end |
Coexpression cluster: | MCL_coexpression_mm9:788 |
Association with transcript: | -20bp_to_ENSMUST00000127253_5end |
EntrezGene: | Mrpl48 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.21e-07 | 23 |
neuroblast (sensu Vertebrata) | 8.21e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 5.91e-12 | 54 |
neurectoderm | 2.46e-11 | 64 |
neural plate | 2.46e-11 | 64 |
presumptive neural plate | 2.46e-11 | 64 |
neural tube | 1.09e-10 | 52 |
neural rod | 1.09e-10 | 52 |
future spinal cord | 1.09e-10 | 52 |
neural keel | 1.09e-10 | 52 |
central nervous system | 1.69e-09 | 73 |
nervous system | 7.71e-09 | 75 |
brain | 3.80e-08 | 47 |
future brain | 3.80e-08 | 47 |
ectoderm-derived structure | 3.97e-08 | 95 |
ectoderm | 3.97e-08 | 95 |
presumptive ectoderm | 3.97e-08 | 95 |
ecto-epithelium | 4.24e-08 | 73 |
regional part of brain | 6.59e-08 | 46 |
pre-chordal neural plate | 1.15e-07 | 49 |
posterior neural tube | 6.73e-07 | 12 |
chordal neural plate | 6.73e-07 | 12 |