FFCP PHASE1:Hg19::chr10:102107191..102107209,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:102107191..102107209,+
|short_description=p7@SCD
|description=CAGE_peak_7_at_SCD_5end
|association_with_transcript=310bp_to_ENST00000370355_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6319 | |EntrezGene=6319 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10571 | |HGNC=10571 | ||
|TSSclassifier=strong | |||
|UniProt=O00767 | |UniProt=O00767 | ||
|association_with_transcript=310bp_to_ENST00000370355_5end | |||
|cluster_id=chr10:102107191..102107209,+ | |||
|coexpression_cluster_id=C173 | |||
|description=CAGE_peak_7_at_SCD_5end | |||
|id=chr10:102107191..102107209,+ | |||
|ontology_enrichment_celltype=CL:0000325!6.24e-11!39;CL:0000066!9.08e-09!254;CL:0000136!2.19e-08!15;CL:0000223!6.51e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000136;4.89e-10;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,8.40e-10,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.56e-17!365;UBERON:0004121!1.27e-13!169;UBERON:0000033!1.34e-13!123;UBERON:0000924!1.49e-13!173;UBERON:0006601!1.49e-13!173;UBERON:0000119!3.07e-13!312;UBERON:0000483!9.77e-13!309;UBERON:0000153!2.46e-12!129;UBERON:0007811!2.46e-12!129;UBERON:0000481!2.51e-12!347;UBERON:0005743!3.59e-12!86;UBERON:0001017!7.31e-12!82;UBERON:0000477!2.14e-11!286;UBERON:0000955!5.28e-11!69;UBERON:0006238!5.28e-11!69;UBERON:0000064!5.51e-11!219;UBERON:0000073!1.75e-10!94;UBERON:0001016!1.75e-10!94;UBERON:0002616!2.45e-10!59;UBERON:0001049!3.12e-10!57;UBERON:0005068!3.12e-10!57;UBERON:0006241!3.12e-10!57;UBERON:0007135!3.12e-10!57;UBERON:0003075!1.03e-09!86;UBERON:0007284!1.03e-09!86;UBERON:0002346!1.52e-09!90;UBERON:0003056!1.30e-08!61;UBERON:0000922!1.62e-08!612;UBERON:0002050!4.63e-08!605;UBERON:0005423!4.63e-08!605;UBERON:0000923!4.91e-08!604;UBERON:0005291!4.91e-08!604;UBERON:0006598!4.91e-08!604;UBERON:0002532!4.91e-08!604;UBERON:0004111!7.35e-08!241;UBERON:0004119!9.99e-08!169;UBERON:0000925!9.99e-08!169;UBERON:0006595!9.99e-08!169;UBERON:0000468!1.03e-07!659;UBERON:0000063!1.58e-07!97;UBERON:0002020!1.64e-07!34;UBERON:0003528!1.64e-07!34;UBERON:0001893!4.73e-07!34;UBERON:0002791!4.80e-07!33;UBERON:0000025!7.07e-07!194;UBERON:0000062!7.09e-07!511;UBERON:0003080!7.17e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.42e-07;9!UBERON:0001557;1.42e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,2.80e-13,223;UBERON:0004121,1.56e-11,171;UBERON:0000924,1.56e-11,171;UBERON:0006601,1.56e-11,171;UBERON:0000119,6.55e-11,309;UBERON:0001017,1.46e-10,81;UBERON:0000483,1.46e-10,306;UBERON:0010371,3.18e-10,104;UBERON:0000955,1.79e-09,68;UBERON:0006238,1.79e-09,68;UBERON:0001049,2.62e-09,56;UBERON:0005068,2.62e-09,56;UBERON:0006241,2.62e-09,56;UBERON:0007135,2.62e-09,56;UBERON:0001016,3.35e-09,89;UBERON:0003075,5.30e-09,82;UBERON:0007284,5.30e-09,82;UBERON:0002346,3.87e-08,86;UBERON:0000073,7.65e-08,53;UBERON:0002616,7.65e-08,53;UBERON:0001737,1.30e-07,9;UBERON:0010314,1.76e-07,132;UBERON:0004119,2.55e-07,160;UBERON:0000925,2.55e-07,160;UBERON:0006595,2.55e-07,160;UBERON:0002050,2.66e-07,564;UBERON:0000923,3.18e-07,560;UBERON:0010316,3.18e-07,560;UBERON:0005291,3.18e-07,560;UBERON:0006598,3.18e-07,560;UBERON:0010317,3.18e-07,560;UBERON:0002532,3.18e-07,560;UBERON:0003056,5.11e-07,61 | |||
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| ||
|short_description=p7@SCD | |||
}} | }} |
Latest revision as of 20:39, 15 September 2015
Short description: | p7@SCD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SCD_5end |
Coexpression cluster: | C173_Adipocyte_mature_skin_left_Hepatocyte_Osteoblast_adipose |
Association with transcript: | 310bp_to_ENST00000370355_5end |
EntrezGene: | SCD |
HGNC: | 10571 |
UniProt: | O00767 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 8.40e-10 | 15 |
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 2.80e-13 | 223 |
ectoderm-derived structure | 1.56e-11 | 171 |
ectoderm | 1.56e-11 | 171 |
presumptive ectoderm | 1.56e-11 | 171 |
cell layer | 6.55e-11 | 309 |
central nervous system | 1.46e-10 | 81 |
epithelium | 1.46e-10 | 306 |
ecto-epithelium | 3.18e-10 | 104 |
brain | 1.79e-09 | 68 |
future brain | 1.79e-09 | 68 |
neural tube | 2.62e-09 | 56 |
neural rod | 2.62e-09 | 56 |
future spinal cord | 2.62e-09 | 56 |
neural keel | 2.62e-09 | 56 |
nervous system | 3.35e-09 | 89 |
neural plate | 5.30e-09 | 82 |
presumptive neural plate | 5.30e-09 | 82 |
neurectoderm | 3.87e-08 | 86 |
regional part of nervous system | 7.65e-08 | 53 |
regional part of brain | 7.65e-08 | 53 |
larynx | 1.30e-07 | 9 |
structure with developmental contribution from neural crest | 1.76e-07 | 132 |
endoderm-derived structure | 2.55e-07 | 160 |
endoderm | 2.55e-07 | 160 |
presumptive endoderm | 2.55e-07 | 160 |
embryonic structure | 2.66e-07 | 564 |
germ layer | 3.18e-07 | 560 |
germ layer / neural crest | 3.18e-07 | 560 |
embryonic tissue | 3.18e-07 | 560 |
presumptive structure | 3.18e-07 | 560 |
germ layer / neural crest derived structure | 3.18e-07 | 560 |
epiblast (generic) | 3.18e-07 | 560 |
pre-chordal neural plate | 5.11e-07 | 61 |